Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F15
(612 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 147 6e-38
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 146 1e-37
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 122 4e-30
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 27 0.11
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 4.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.1
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 4.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 7.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.2
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 7.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.5
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 147 bits (357), Expect = 6e-38
Identities = 65/74 (87%), Positives = 70/74 (94%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
LNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKS KSGDAAIV L P
Sbjct: 347 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQP 406
Query: 430 SKPLCVESFQEFPP 389
+KP+CVE+FQEFPP
Sbjct: 407 TKPMCVEAFQEFPP 420
Score = 48.8 bits (111), Expect = 4e-08
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAVNF 319
P P + PLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 406 PTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTF 443
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 101 HTPQMFCYNCKLKCKFIE 48
+TP + C+ + CKF E
Sbjct: 357 YTPVLDCHTAHIACKFAE 374
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 146 bits (354), Expect = 1e-37
Identities = 64/74 (86%), Positives = 69/74 (93%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
LNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE+NPKS KSGDAAIV LVP
Sbjct: 347 LNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVP 406
Query: 430 SKPLCVESFQEFPP 389
SKP+C E+FQEFPP
Sbjct: 407 SKPMCAEAFQEFPP 420
Score = 50.0 bits (114), Expect = 2e-08
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = -1
Query: 432 PPSPCVWSPSRNSHPLGRFAVRDMRQTVAVGVIKAVNF 319
P P + PLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 406 PSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443
Score = 21.4 bits (43), Expect = 7.2
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -2
Query: 101 HTPQMFCYNCKLKCKFIE 48
+TP + C+ + CKF +
Sbjct: 357 YTPVLDCHTAHIACKFAD 374
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 122 bits (293), Expect = 4e-30
Identities = 55/62 (88%), Positives = 58/62 (93%)
Frame = -3
Query: 610 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSSKSGDAAIVNLVP 431
LNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKS KSGDAAIV L P
Sbjct: 58 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQP 117
Query: 430 SK 425
+K
Sbjct: 118 TK 119
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 101 HTPQMFCYNCKLKCKFIE 48
+TP + C+ + CKF E
Sbjct: 68 YTPVLDCHTAHIACKFAE 85
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 27.5 bits (58), Expect = 0.11
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 349 RRRCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVN 242
R RC+ ++ GS+ WQ +SC + E ++V+
Sbjct: 54 RGRCSSYLQVSGSKIWQMERSCMCCQESGEREASVS 89
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 481 NPKSSKSGDAAIVNLVPSKPLC 416
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 516 KSTVVLVNQQRTTLNPVNLVM 454
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 481 NPKSSKSGDAAIVNLVPSKPLC 416
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.2
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = -3
Query: 280 KSHQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLFYIFYMAYTVTLFLIYIRLY 101
+ G+E S L +L + GV K R N+F + + M L L + +++
Sbjct: 169 RKENGKEFDCHNYMSELTVDILLETAMGVSKPTRDHNAFEYAMAVMKMCDILHLRHTKIW 228
Query: 100 I 98
+
Sbjct: 229 L 229
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 259 VASTVNSSVLYTTAILHSPKGVQKERRATNSFLFYI 152
V S + VLYTT + + G K+ SF+ Y+
Sbjct: 167 VISMHDGLVLYTTPSICTALGYLKDAWIGRSFIDYV 202
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.4 bits (43), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 259 VASTVNSSVLYTTAILHSPKGVQKERRATNSFLFYI 152
V S + VLYTT + + G K+ SF+ Y+
Sbjct: 162 VISMHDGLVLYTTPSICTALGYLKDAWIGRSFIDYV 197
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 602 PRSNIKRIHTCIGLPHSP 549
P S +R HT G+P P
Sbjct: 1067 PMSEERRQHTAEGVPEQP 1084
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 516 KSTVVLVNQQRTTLNPVNLVM 454
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 516 KSTVVLVNQQRTTLNPVNLVM 454
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,597
Number of Sequences: 438
Number of extensions: 3917
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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