Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F14
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0005 + 17063717-17063866,17065737-17065855,17066903-170672... 127 6e-30
09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,713... 100 1e-21
07_01_1136 + 10668637-10669665,10670259-10670282 31 0.72
11_01_0519 + 4066776-4066892,4067042-4067099,4067322-4067608,406... 30 1.7
02_02_0497 + 10961079-10963824,10964182-10964282,10964759-109648... 30 1.7
07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733 29 2.2
03_03_0113 + 14550435-14550822,14550831-14551660,14552105-145522... 29 2.2
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608... 29 2.9
10_08_0652 + 19596321-19596917 29 3.8
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 29 3.8
02_02_0019 - 6148580-6149122 29 3.8
11_01_0036 + 268028-268168,268734-268839,268920-269031,269126-26... 28 5.1
07_03_1342 - 25891761-25892102,25892588-25893135,25893342-258950... 28 5.1
12_01_0268 - 1941515-1941534,1941868-1942057,1942155-1942322,194... 28 6.7
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45... 28 6.7
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 28 6.7
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 28 6.7
04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680 28 6.7
01_04_0051 + 15430980-15431591 28 6.7
12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-53... 27 8.9
01_01_0146 - 1329804-1330259,1331029-1331060,1331164-1331398 27 8.9
>05_04_0005 +
17063717-17063866,17065737-17065855,17066903-17067218,
17067579-17067722,17067909-17067926,17068853-17068954,
17069358-17069461,17069543-17069669,17069809-17069961,
17070261-17070361,17070538-17070739,17071245-17071469
Length = 586
Score = 127 bits (307), Expect = 6e-30
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 4/183 (2%)
Frame = +1
Query: 4 RVVIFSQYPQYSCATTGSSLNAVADYYKNKQIPRDIRFSLIERWGSHPLLARVFAERIKE 183
++V+ YPQ+S +T+GSSL + ++ + +++ ++I W + A I++
Sbjct: 291 KLVVLPLYPQFSISTSGSSLRLLEGIFREDEYLVNMQHTVIPSWYQREGYIKAMATLIEK 350
Query: 184 KLTLFPAGVRDQVLILFTAHSLPLKAVSR-GDTYPHEVAASVSATVSEL---GAVNPHRL 351
+L F +V+I F+AH +PL V GD Y E+ V + EL G N L
Sbjct: 351 ELRTFSEP--QKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITNSCTL 408
Query: 352 VWQSKVGPLPWLQPYTDDAIKSYAKQGVKYMILVPIAFVNEHIETLHELDIEYCDEVAKE 531
+QS+VGP+ WL+PYTD+ I ++GVK ++ VPI+FV+EHIETL E+D+EY E+A E
Sbjct: 409 AYQSRVGPVEWLRPYTDETIIELGQKGVKSLLAVPISFVSEHIETLEEIDVEY-KELALE 467
Query: 532 AGI 540
+GI
Sbjct: 468 SGI 470
>09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,
7138413-7138538,7138650-7139619,7139641-7139737,
7140026-7140113,7140336-7140396,7140425-7140447,
7140663-7140776,7141193-7141306,7144731-7144825,
7146506-7146824,7147166-7147309,7147463-7147564,
7147868-7147971,7148121-7148247,7148804-7148845,
7148939-7149091,7149326-7149426,7149807-7150227
Length = 1139
Score = 100 bits (239), Expect = 1e-21
Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 16/176 (9%)
Frame = +1
Query: 4 RVVIFSQYPQYSCATTGSSLNAVADYYKNKQIPRDIRFSLIERWGSHPLLARVFAERIKE 183
++V+ YPQYS +T+GSS+ + + K + S+IE W + A+ I++
Sbjct: 832 KLVVLPLYPQYSISTSGSSIRVLQNIVKEDSYFAGLPISIIESWYQRDGYVKSMADLIEK 891
Query: 184 KLTLFPAG------------VRDQVLILFTAHSLPLKAVS-RGDTYPHEVAASVSATVSE 324
+L++F + V+I F+AH +PL V+ GD Y ++ ++ + E
Sbjct: 892 ELSIFSNPEESVIGTCHFRMIHVNVMIFFSAHGVPLTYVTDAGDPYRDQMEDCIALIMGE 951
Query: 325 L---GAVNPHRLVWQSKVGPLPWLQPYTDDAIKSYAKQGVKYMILVPIAFVNEHIE 483
L G +N H L +QS+VGP+ WL+PYTD+ + +QGVK ++ VP+ F++ I+
Sbjct: 952 LKSRGILNSHTLAYQSRVGPVQWLKPYTDEVLVELGQQGVKSLLAVPVRFISLTIQ 1007
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 448 LVPIAFVNEHIETLHELDIEYCDEVAKEAGI 540
L I+FV+EHIETL E+D+EY E+A E+GI
Sbjct: 1031 LSSISFVSEHIETLEEIDMEY-KELALESGI 1060
>07_01_1136 + 10668637-10669665,10670259-10670282
Length = 350
Score = 31.1 bits (67), Expect = 0.72
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3
Query: 433 PLVLRMT*WHRRCRAAATAEVPPSIARRACGGSPLPAR*QWRILMQPLHVGMC 275
P+VL MT +RCR P++ R CGG+PLPA R + HV +C
Sbjct: 299 PVVLGMT--KQRCRL-------PALERITCGGAPLPAPAIERFRRRFPHVDLC 342
>11_01_0519 +
4066776-4066892,4067042-4067099,4067322-4067608,
4067706-4067822,4067898-4067958,4068042-4068133,
4068547-4068632,4068926-4068975,4069077-4069117,
4069222-4069392,4069875-4069942,4070088-4070148,
4070471-4070757,4072008-4072172,4072759-4072760,
4072829-4073139,4073600-4073787,4075231-4075482,
4076035-4076114,4076199-4076399,4076959-4077014,
4077137-4077328
Length = 980
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 258 LQREAVCSEEYQNLISYTGWEQCKFFLYPL 169
+Q + VCSE ++ +SY G EQ FL+ L
Sbjct: 146 IQSQNVCSEGHEPFVSYEGLEQLHRFLFIL 175
>02_02_0497 +
10961079-10963824,10964182-10964282,10964759-10964800,
10966918-10966986
Length = 985
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 341 GFTAPSSLTVADTDAATSCGYVSPLDTAFR 252
G+T SS+ A DA CGY+ +T FR
Sbjct: 536 GYTGDSSVANAILDAYAKCGYLHDAETLFR 565
>07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733
Length = 194
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 505 EYCDEVAKEAGIVQIERAETPEHSSHIHSGACRRR 609
+Y DE + GI + ++ E+ HIH+ RR+
Sbjct: 120 DYTDEEVERLGITMADDSDWDEYLDHIHTAIARRK 154
>03_03_0113 +
14550435-14550822,14550831-14551660,14552105-14552278,
14552350-14552517
Length = 519
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 321 RAGSGEPPQARLAIEGGTSAVAAALHRRCHQVIR 422
R G PP+ +A G +A +AALH + H +++
Sbjct: 203 RVGPAPPPKITMATTGHAAARSAALHGKLHWLVQ 236
>03_06_0221 +
32458867-32459149,32460271-32460386,32460461-32460807,
32461231-32461411,32461507-32461629,32461828-32462115,
32462536-32462688,32463068-32463169,32463260-32463313,
32463518-32463624,32463867-32463927,32464019-32464150,
32464245-32464382,32464459-32464539,32464635-32464715,
32465133-32465213,32465300-32465413
Length = 813
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 388 QPYTDDAIKSYAKQGVKYMILVPIAFVNEHIETL----HELDIEYCDEVAKEAGIVQIER 555
+P+ + + YA +GVKY+ I +H+ET HE I Y + ++ I E+
Sbjct: 278 KPFLECTSEFYATEGVKYLQQSDIPDYLKHVETRLQEEHERCILYLEANTRKPLITATEK 337
Query: 556 AETPEHSSHI 585
H+S I
Sbjct: 338 QLLQRHTSAI 347
>10_08_0652 + 19596321-19596917
Length = 198
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +1
Query: 121 LIERWGSHPLLARVFAERIKEKLTLFPAGVRDQVLILFTAHSLPLKAVSRGDTY 282
++ RWG HP LA ++ K L G+ ++V+ L HSL V RGDT+
Sbjct: 81 VVLRWGGHPSLAEIYKPEWKGNHQL---GLGERVMDL-GDHSL---FVGRGDTF 127
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Frame = +3
Query: 330 SGEPPQARLAIEGGTSAVAAALH-RRCHQVIRKTRGEIYDSGPDSV--------CQRTHR 482
S EPP +L I G + AAALH C+ + Y +V C RT R
Sbjct: 112 SSEPPDVKLGIGGFSMGAAAALHSAACYAHGKFANSMPYPITLSAVISLSGWLPCSRTLR 171
Query: 483 DITRTGHRILRRS 521
T + H RR+
Sbjct: 172 SKTESSHMAARRA 184
>02_02_0019 - 6148580-6149122
Length = 180
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 315 C*RAGSGEPPQARLAIEGGTSAVAAALHRRCHQVIRKTRGEIYDSG 452
C G P+ L + G +A AAA+H R + + GE +DSG
Sbjct: 47 CVGIGGHHAPRRVLRLGGNKAAAAAAVHHRRGEA--EEEGEYFDSG 90
>11_01_0036 +
268028-268168,268734-268839,268920-269031,269126-269241,
269321-269399,269476-269614,269689-269747,269924-270218,
270303-270362,270502-270933
Length = 512
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 238 AHSLPLKAVSRGDTYPHEVAASV 306
AH+ P KA R D Y HE+ SV
Sbjct: 433 AHAKPTKAEIRNDNYSHEINKSV 455
>07_03_1342 - 25891761-25892102,25892588-25893135,25893342-25895012,
25895818-25896745
Length = 1162
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = -2
Query: 389 CSH-GRGPTFDCQTSLWG 339
C H G GP F QTS+WG
Sbjct: 1116 CEHVGEGPRFGYQTSIWG 1133
>12_01_0268 -
1941515-1941534,1941868-1942057,1942155-1942322,
1943425-1943568,1944284-1944443,1944512-1944621,
1944900-1945019,1945649-1945766,1946610-1946729,
1947228-1947285,1947590-1947723,1949332-1949414,
1949544-1949786,1949851-1949976,1950075-1951562
Length = 1093
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 390 ALHRRCHQVIRKTRGEIYDSGPDSVCQRTHRDITRTGHRILRRSRQRGWNRTNRKGGNPR 569
AL R V+ + RGEI +G DS + +RTG R R G +GG R
Sbjct: 22 ALPRGPRPVLLRRRGEINRTGGDSTRDGDSAEKSRTGRGHEIRGRAGGVEAEAARGGYSR 81
>11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-459581,
459924-460183,461834-461918,462587-462919,463053-463137,
463289-463374,463455-463556,463656-463795,464332-464658,
464778-465389,465502-465586,465587-465682,465762-466115,
466212-466322,466426-466509,467086-467164,467742-467899,
468034-468150,468240-468398,468475-468557,469098-469200,
470784-471080
Length = 1899
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 216 ISYTGWEQCKFFLYPLSEYPRKEGVGTPTFYQTK 115
+ +G E C F L EY +K G+ TP ++ K
Sbjct: 1162 VEESGVENCYVFKSRLQEYAQKAGLQTPEYHTFK 1195
>09_06_0076 + 20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 392 GCSHGRGPTFDCQTSLWGFTAPSSLTVADTDAATSCGYVSPL 267
GC C+TSL +A + T DT + CG SPL
Sbjct: 926 GCMKAASGCLPCKTSLPRESASAWWTQVDTVSGQGCGESSPL 967
>04_04_0959 +
29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 465 CQRTHRDITRTGHRILRRSRQRGWNRT 545
C R HR +R HR RR R W R+
Sbjct: 65 CLRRHRRSSRRSHRRCRRRSPRLWRRS 91
>04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680
Length = 936
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = -1
Query: 360 LPDEPVGVHRSQLANSGGY*CSHFMWVCVTSRHSLQREAVCSEEYQNLISYTGWEQCKF 184
LP P V + +G C+ + +C ++ R VC+E Y+++ + C F
Sbjct: 568 LPKIPSKVRHLSIFTNGNISCTELVTICTQNKKL--RSLVCNESYKSIKQFAPVIDCWF 624
>01_04_0051 + 15430980-15431591
Length = 203
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 453 PDSVCQRTHRDITRTGHRILRRSRQRGWNRTNRKGGNPRTL 575
P C+R R G R LRR R++G R +G P+ +
Sbjct: 151 PSWRCRRRMEAGARGGARRLRRRRRQGRGRLRHRGEEPKEM 191
>12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-538255,
538601-538860,539950-540073,540978-541310,541447-541531,
541683-541768,541843-541941,542041-542180,542717-543043,
543163-543774,543887-543971,543972-544067,544147-544500,
544536-544559,544597-544707,544811-544894,545468-545546,
546122-546279,546412-546528,546622-546780,546857-546939,
547525-547627,549184-549495
Length = 1925
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 249 EAVCSEEYQNLISYTGWEQCKFFLYPLSEYPRKEGVGTPTFYQTK 115
E V I G E C F L EY +K G+ TP ++ K
Sbjct: 1176 EIVLGRNSNEDILAVGVENCYVFKSRLQEYAQKTGLQTPEYHTFK 1220
>01_01_0146 - 1329804-1330259,1331029-1331060,1331164-1331398
Length = 240
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 394 RAAATAEVPPSIARRACGGSPLPAR*QWR 308
+A A+ E P R C G P+ AR +WR
Sbjct: 101 QAVASGEGPDGRRARRCPGGPVHARSRWR 129
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,499,981
Number of Sequences: 37544
Number of extensions: 522613
Number of successful extensions: 1429
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -