Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_F14
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   5.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.2  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/16 (68%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -3

Query: 166  RIPSQGGG-GNPNVLS 122
            R+PSQGGG G  NV S
Sbjct: 1789 RVPSQGGGSGTHNVFS 1804


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 483 LYVFVDKRYRDQNHIFHPL 427
           LYV+ D  Y D N   +PL
Sbjct: 282 LYVYEDSTYDDINQWVYPL 300


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 180 LYPLSEYPRKEGVGTPTFYQTKPYIPRDLFILV 82
           +YP +    ++ +   TF  TK  IP+++ I +
Sbjct: 366 MYPPASILMRKAISDYTFNDTKITIPKEMKIWI 398


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 474 FVDKRYRDQNHIFHP 430
           F D  +R Q+H F+P
Sbjct: 341 FKDSSFRIQHHFFYP 355


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 296  LHQYPPLLASWER*TPTGSSGNRRWDL 376
            LH Y PL  S +  TP G+   + W +
Sbjct: 999  LHVYAPLKISLDVNTPKGNMQWKIWPM 1025


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,322
Number of Sequences: 438
Number of extensions: 5024
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)