Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_F12
         (370 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6NLZ5 Cluster: Uncharacterized protein ENSP00000371562...    39   0.033
UniRef50_Q4XH02 Cluster: Putative uncharacterized protein; n=3; ...    34   0.95 
UniRef50_Q11W95 Cluster: B-glycosyltransferase, glycosyltransfer...    31   5.1  

>UniRef50_A6NLZ5 Cluster: Uncharacterized protein ENSP00000371562;
           n=3; Eukaryota|Rep: Uncharacterized protein
           ENSP00000371562 - Homo sapiens (Human)
          Length = 162

 Score = 38.7 bits (86), Expect = 0.033
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = +2

Query: 44  VCVYTMKYSNKSLYAYARYNINC*CIRLRLKLLYIHIYMQ*YKYKCHVTYASKNVFFGYI 223
           +CVY   Y +  +YAY  Y   C C+R     +YI++ M+ Y + C   Y  K +     
Sbjct: 12  ICVYIRTYIHICVYAYV-YTYMCVCVR-----IYIYVCMRTYIHICVYAYVYKYMCVCVR 65

Query: 224 LFIRTSLWVDQYKYI 268
           ++I T +++  Y YI
Sbjct: 66  IYIHTCMYI--YTYI 78


>UniRef50_Q4XH02 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 194

 Score = 33.9 bits (74), Expect = 0.95
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +2

Query: 131 LKLLYIHIYMQ*YKYKCHVTYASKNVFFGYILFIRTSLWVDQYKYIRNSESD 286
           L ++Y++IYM     KC ++++  N F    L +RT     Q  Y++NS +D
Sbjct: 8   LFVIYVNIYMHANIAKCFISFSKNNQFTNISLNLRTIKRPIQRTYLKNSLND 59


>UniRef50_Q11W95 Cluster: B-glycosyltransferase, glycosyltransferase
           family 2 protein; n=1; Cytophaga hutchinsonii ATCC
           33406|Rep: B-glycosyltransferase, glycosyltransferase
           family 2 protein - Cytophaga hutchinsonii (strain ATCC
           33406 / NCIMB 9469)
          Length = 652

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 173 YKCHVTYA--SKNVFFGYILFIRTSLWVDQYKYIRN 274
           YK +VT A  +++ FFG ++    S ++D+Y+Y +N
Sbjct: 345 YKSNVTLARLARSFFFGTLIIASISYFIDEYRYSKN 380


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,736,697
Number of Sequences: 1657284
Number of extensions: 5379848
Number of successful extensions: 10458
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10454
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)