Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F11
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55210.1 68418.m06882 expressed protein similar to unknown pr... 30 1.5
At2g05645.1 68415.m00604 hypothetical protein 30 1.5
At5g19610.1 68418.m02334 sec7 domain-containing protein similar ... 29 2.0
At1g09090.2 68414.m01015 respiratory burst oxidase protein B (Rb... 29 2.0
At1g09090.1 68414.m01014 respiratory burst oxidase protein B (Rb... 29 2.0
At4g39210.1 68417.m05551 glucose-1-phosphate adenylyltransferase... 29 3.5
At3g58790.1 68416.m06552 glycosyl transferase family 8 protein c... 29 3.5
At5g43190.1 68418.m05276 F-box family protein (FBX6) contains si... 28 4.7
At2g01820.1 68415.m00113 leucine-rich repeat protein kinase, put... 28 4.7
At1g48690.1 68414.m05449 auxin-responsive GH3 family protein sim... 28 4.7
At1g27680.1 68414.m03383 glucose-1-phosphate adenylyltransferase... 28 4.7
At5g10710.2 68418.m01241 expressed protein 28 6.1
At5g10710.1 68418.m01240 expressed protein 28 6.1
At2g21590.1 68415.m02568 glucose-1-phosphate adenylyltransferase... 28 6.1
At2g16950.1 68415.m01953 importin beta-2 subunit family protein ... 28 6.1
At1g50940.1 68414.m05727 electron transfer flavoprotein alpha su... 28 6.1
At4g29200.1 68417.m04177 hypothetical protein 27 8.1
At2g34210.1 68415.m04186 KOW domain-containing transcription fac... 27 8.1
At1g50730.1 68414.m05705 expressed protein 27 8.1
>At5g55210.1 68418.m06882 expressed protein similar to unknown
protein (pir||T04913)
Length = 168
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 499 INSTLVRTTSSAARSRCTAL-SNRDRGLKTYWKKVSTQLEQVSRASRVGG 645
+ S L RT+S + TA+ S R R K W +VST V RAS+ G
Sbjct: 4 VGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWVRVSTSSVGVFRASKSNG 53
>At2g05645.1 68415.m00604 hypothetical protein
Length = 204
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 643 HQLSMLLKPVPVVSKPFSNMFLVHG 569
H+ +LL P P++S P S+MF+ HG
Sbjct: 130 HRPFVLLMPRPLLSSPHSHMFVEHG 154
>At5g19610.1 68418.m02334 sec7 domain-containing protein similar to
SP|Q42510 Pattern formation protein EMB30 (GNOM)
{Arabidopsis thaliana}; contains Pfam profile PF01369:
Sec7 domain
Length = 1375
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = -1
Query: 260 DIHVIFIHKGDHLFRYNAFNFDTREIKFLASITRQHVFEKHERVHDAFHYLPEYWIS*AS 81
++H+ + H F + N DT FL S +K ER+ +AF E + S
Sbjct: 554 ELHLSVLRSFTHTFEFTGMNLDTALRTFLESFRLPGESQKIERMIEAF---SERFYDQQS 610
Query: 80 SVHIESSGNVRVLVH--IILIVTQH 12
S S V +L + I+L QH
Sbjct: 611 SDIFASKDTVHILCYSLIMLNTDQH 635
>At1g09090.2 68414.m01015 respiratory burst oxidase protein B
(RbohB) / NADPH oxidase identical to respiratory burst
oxidase protein B from Arabidopsis thaliana [gi:3242783]
Length = 843
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +1
Query: 202 LNALYLKRWSPLWMNMTWIS--RMHFTWTRLRCKRRSLIWSTLRVCGVLITSLSRCLSML 375
++ +L+ W +W+ WIS FTW L+ KR++ ++ + C + + L
Sbjct: 287 ISYFFLENWKRIWVLTLWISICITLFTWKFLQYKRKT-VFEVMGYCVTVAKGSAETLKFN 345
Query: 376 CQIRLLTQSFVYLLVPNTIAW 438
+ LL + NTI W
Sbjct: 346 MALILLP------VCRNTITW 360
>At1g09090.1 68414.m01014 respiratory burst oxidase protein B
(RbohB) / NADPH oxidase identical to respiratory burst
oxidase protein B from Arabidopsis thaliana [gi:3242783]
Length = 622
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +1
Query: 202 LNALYLKRWSPLWMNMTWIS--RMHFTWTRLRCKRRSLIWSTLRVCGVLITSLSRCLSML 375
++ +L+ W +W+ WIS FTW L+ KR++ ++ + C + + L
Sbjct: 287 ISYFFLENWKRIWVLTLWISICITLFTWKFLQYKRKT-VFEVMGYCVTVAKGSAETLKFN 345
Query: 376 CQIRLLTQSFVYLLVPNTIAW 438
+ LL + NTI W
Sbjct: 346 MALILLP------VCRNTITW 360
>At4g39210.1 68417.m05551 glucose-1-phosphate adenylyltransferase
large subunit 3 (APL3) / ADP-glucose pyrophosphorylase
identical to SP|P55231
Length = 521
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 263 RDIHVIFIHKGDHLFRYNAFNFDTREIKFLASIT 162
R+I I I GDHL+R N +F + A IT
Sbjct: 206 RNIENIIILSGDHLYRMNYMDFVQHHVDSKADIT 239
>At3g58790.1 68416.m06552 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8; general stress protein gspA, Bacillus
subtilis, PIR:S16423
Length = 540
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -1
Query: 191 REIKFLASITRQHVFEKHERVHDAFHYLPEYWIS*ASSVHIESSGNVRVLVHIILIVTQH 12
R+I+ AS+T++ + + +V A H+ YW H+ S G + L + L +T+
Sbjct: 138 RDIRAFASVTKKMLLQMERKVQSAKHHELVYW-------HLASHGIPKSLHCLSLRLTEE 190
Query: 11 FS 6
+S
Sbjct: 191 YS 192
>At5g43190.1 68418.m05276 F-box family protein (FBX6) contains
similarity to unusual floral organs (UFO) GI:4376159
from [Arabidopsis thaliana]
Length = 403
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 412 LLVPNTIAWAAS*ASMTNALTCSKSIASSINSTLVRTTSSAARS 543
L PN I+W + +LTC+ S+ SS N L + S ++ S
Sbjct: 112 LFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVS 155
>At2g01820.1 68415.m00113 leucine-rich repeat protein kinase,
putative similar to protein kinase TMK1
gi|166888|gb|AAA32876; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 943
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 86 ASSVHIESSGNVRVLVHIILIVTQHFSE 3
AS +H+ +GN+ + + ++ VT +FSE
Sbjct: 560 ASDIHVVEAGNLVISIQVLRNVTNNFSE 587
>At1g48690.1 68414.m05449 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 190
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 622 KPVPVVSKPFSNMFLVHGLCSIT 554
K PV +K F NM +H LCS T
Sbjct: 99 KIFPVNNKYFENMIFIHALCSST 121
>At1g27680.1 68414.m03383 glucose-1-phosphate adenylyltransferase
large subunit 2 (APL2) / ADP-glucose pyrophosphorylase
identical to SP|P55230
Length = 518
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 263 RDIHVIFIHKGDHLFRYNAFNFDTREIKFLASIT 162
+++ + I GDHL+R + NF + I+ A IT
Sbjct: 203 KNVEHVLILSGDHLYRMDYMNFVQKHIESNADIT 236
>At5g10710.2 68418.m01241 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 521 VLTSVEFIDEAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNIDRHLERLVI 342
VL S F+++ I EH F + + + ++F K D V L+ +DR + +I
Sbjct: 142 VLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLLQAYVDRKEQVRLI 201
Query: 341 K 339
K
Sbjct: 202 K 202
>At5g10710.1 68418.m01240 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 521 VLTSVEFIDEAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNIDRHLERLVI 342
VL S F+++ I EH F + + + ++F K D V L+ +DR + +I
Sbjct: 142 VLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLLQAYVDRKEQVRLI 201
Query: 341 K 339
K
Sbjct: 202 K 202
>At2g21590.1 68415.m02568 glucose-1-phosphate adenylyltransferase
large subunit, putative / ADP-glucose pyrophosphorylase,
putative strong similarity to SP|P55231
Length = 523
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 263 RDIHVIFIHKGDHLFRYNAFNFDTREIKFLASIT 162
R+I I I GDHL+R N +F + A IT
Sbjct: 208 RNIENILILSGDHLYRMNYMDFVQSHVDSNADIT 241
>At2g16950.1 68415.m01953 importin beta-2 subunit family protein
similar to SP|Q92973 Importin beta-2 subunit
(Transportin) {Homo sapiens}; contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 891
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 412 NIRTTASTALSDITSIDTLKGW 347
NIRTT T +S I +I+ + GW
Sbjct: 109 NIRTTVGTIISVIVNIEGVSGW 130
>At1g50940.1 68414.m05727 electron transfer flavoprotein alpha
subunit family protein contains Pfam profile: PF00766
electron transfer flavoprotein, alpha subunit
Length = 363
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 283 RLRCKRRSLIWSTLRVCGVLITSLSRCLSMLCQIRLLTQSFVYLLVPNTIAWAAS*ASMT 462
R K + + + R + ITSLSRC+S L +L + + P T++ + S+
Sbjct: 8 RALTKNKFVASNAPRSISISITSLSRCISTL----ILAEHESGTIKPQTVSTVVAANSLG 63
Query: 463 NALTCSKSIASSINSTLVRTTSSAA 537
+ + S +A S S+L S AA
Sbjct: 64 ESSSISLLLAGS-GSSLQEAASQAA 87
>At4g29200.1 68417.m04177 hypothetical protein
Length = 457
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 310 IWSTLRVCGVLITSLSRCLSMLCQIRLLTQSFVYLLVPNTIAWAAS*ASMTNALTCSKSI 489
I+ L C VL L CL L + + + F+++++ NT+ A N+++C+ S+
Sbjct: 399 IYCDLTCCTVL---LCLCLKALMEFKSMHFIFLFMVLGNTVCCNALIFEFLNSISCNCSM 455
>At2g34210.1 68415.m04186 KOW domain-containing transcription factor
family protein
Length = 990
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 381 DKAVDAVVRIFIGPKYDCMGRLMSINDKRLDMLEIDSFVYKLDTGKNNIVRSSL 542
D V V+I +GP GRL+ + DK L +E+++ K+ TGK + R ++
Sbjct: 683 DHLVGTYVKIRLGPFKGYSGRLVEVKDK-LVRVELEA---KIVTGKLHFERKAI 732
>At1g50730.1 68414.m05705 expressed protein
Length = 1013
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +1
Query: 301 RSLIWSTLRVCGVLITSLSRCLSMLCQIRLLTQSFVYLLVPNTIAWAAS*ASMTNALTCS 480
RS W+TLRV + ++ LS L Q L S ++ N + + + ++C+
Sbjct: 788 RSSSWATLRVKVKIFCAIMSLLSTLSQDNLPYHSANPEIIGNELLFFGDSSYKQELVSCT 847
Query: 481 KSIASSINSTLVRTTSSAAR 540
+ + S + + + +S +R
Sbjct: 848 QLVLSELLDAIEQESSQISR 867
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,445,114
Number of Sequences: 28952
Number of extensions: 263060
Number of successful extensions: 837
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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