Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F10
(177 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 42 4e-05
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 1.3
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 25 5.4
AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 25 5.4
AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical... 25 7.1
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 25 9.4
U56964-4|AAB54030.1| 536|Caenorhabditis elegans Hypothetical pr... 25 9.4
U56964-3|AAL65786.1| 522|Caenorhabditis elegans Hypothetical pr... 25 9.4
AL032654-11|CAB63389.2| 529|Caenorhabditis elegans Hypothetical... 25 9.4
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 42.3 bits (95), Expect = 4e-05
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 52 NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEIS 168
N D++ YW Q G P K+++G+ T GR W L++ S I+
Sbjct: 277 NVDSSARYWNQKGMPKEKIIVGMPTYGRGWTLNNASAIN 315
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 24 RTAEPRSSTKRRRCYKLLDSKWCAYPQTCPWY 119
RT +S + RRRC + +C CP+Y
Sbjct: 199 RTPPYKSRSSRRRCKDFEERGYCIRGDQCPYY 230
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 52 NADAAINYWIQNGAPTHKLVLGISTTGRTWK 144
NAD ++ ++ N +L +G+ GR WK
Sbjct: 1182 NADFSMKFYACNTKKPSQLTMGVPFYGRYWK 1212
>AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical
protein Y56A3A.16 protein.
Length = 619
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 16 PIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSD 156
P Y QN +I ++ ++ KLVL IS GR + D+D
Sbjct: 95 PQYESQNLKESVIVRNSIFWFTESEVDAAKLVLPISNKGRVCRFDND 141
>AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical
protein Y22D7AL.14 protein.
Length = 264
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 52 NADAAINYWIQNGAPTHKLVLGISTTGRTWKL 147
NA+A++ W G P + GI T R ++L
Sbjct: 124 NAEASMKTWYDLGLPRNISFFGIPTYARAFQL 155
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +1
Query: 10 TAPIYAPQNRDPLQNAD--AAINYWIQNGAPTH 102
+A IY P NRDPL + AIN N H
Sbjct: 495 SAAIYCPINRDPLSQREELRAINRSTSNTGAYH 527
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +1
Query: 10 TAPIYAPQNRDPLQNAD--AAINYWIQNGAPTH 102
+A IY P NRDPL + AIN N H
Sbjct: 495 SAAIYCPINRDPLSQREELRAINRSTSNTGAYH 527
>U56964-4|AAB54030.1| 536|Caenorhabditis elegans Hypothetical
protein F52E4.1a protein.
Length = 536
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 155 SESSFHVRPVVLIPRTSLWVGAP 87
S SS H + +V I R ++ VGAP
Sbjct: 128 SLSSIHAKKIVKIMREAMLVGAP 150
>U56964-3|AAL65786.1| 522|Caenorhabditis elegans Hypothetical
protein F52E4.1b protein.
Length = 522
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 155 SESSFHVRPVVLIPRTSLWVGAP 87
S SS H + +V I R ++ VGAP
Sbjct: 114 SLSSIHAKKIVKIMREAMLVGAP 136
>AL032654-11|CAB63389.2| 529|Caenorhabditis elegans Hypothetical
protein Y52B11A.7 protein.
Length = 529
Score = 24.6 bits (51), Expect = 9.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 177 GTPGNFTV*IELPRTSSGADTKDKFVGRRTILNPVIYSSV 58
G+P FT + P T+S A + IL+P IY SV
Sbjct: 352 GSPLLFTSIVASPATASQALILSPVLFTSLILSPAIYGSV 391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.127 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,199,572
Number of Sequences: 27780
Number of extensions: 66030
Number of successful extensions: 124
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 12,740,198
effective HSP length: 39
effective length of database: 11,656,778
effective search space used: 221478782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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