Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F10
(177 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 0.15
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 0.45
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 1.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 1.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 1.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 1.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 2.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 2.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 20 3.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 3.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 3.1
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 20 3.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 19 5.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 19 5.5
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 19 7.3
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 19 7.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 18 9.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 18 9.6
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 24.2 bits (50), Expect = 0.15
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST--TGRTWKLDSDSEISR 171
+++WI A + ++ LGI+T T T LDS +++ +
Sbjct: 264 VSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPK 300
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.6 bits (46), Expect = 0.45
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++WI + A + ++ LGI+T
Sbjct: 261 VSFWINHEATSARVALGITT 280
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 1.4
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++W+ A ++ LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 1.4
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++W+ A ++ LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 1.4
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++W+ A ++ LG++T
Sbjct: 179 VSFWLNRNATPARVALGVTT 198
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 1.8
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++W+ A ++ LGI+T
Sbjct: 233 VSFWLNREATADRVSLGITT 252
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++W+ A ++VLG +T
Sbjct: 251 VSFWLHMDASPPRIVLGTNT 270
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 103 CG*AHHFESS 74
C HHFESS
Sbjct: 73 CSDVHHFESS 82
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/17 (41%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
Frame = +3
Query: 72 LLDSKWCAYPQTCP-WY 119
L+D+ W YP P W+
Sbjct: 36 LIDANWYQYPPLNPMWH 52
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 3.1
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++W+ A ++ LG++T
Sbjct: 261 VSFWLDQSAVPARVSLGVTT 280
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 3.1
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++W+ A ++ LG++T
Sbjct: 261 VSFWLDQSAVPARVSLGVTT 280
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/17 (41%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
Frame = +3
Query: 72 LLDSKWCAYPQTCP-WY 119
L+D+ W YP P W+
Sbjct: 2 LIDANWYQYPPLNPMWH 18
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 19.0 bits (37), Expect = 5.5
Identities = 5/20 (25%), Positives = 14/20 (70%)
Frame = +1
Query: 67 INYWIQNGAPTHKLVLGIST 126
+++WI+ A ++ LG+++
Sbjct: 264 VSFWIKPEAAPARVTLGVTS 283
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 19.0 bits (37), Expect = 5.5
Identities = 5/11 (45%), Positives = 11/11 (100%)
Frame = -1
Query: 90 TILNPVIYSSV 58
++LNP+IY+++
Sbjct: 420 SLLNPIIYATL 430
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 74 TGFKMVRLPTNLSL 115
TGF+ R PT++ L
Sbjct: 170 TGFEHKRQPTSIDL 183
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 74 TGFKMVRLPTNLSL 115
TGF+ R PT++ L
Sbjct: 170 TGFEHKRQPTSIDL 183
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 18.2 bits (35), Expect = 9.6
Identities = 4/10 (40%), Positives = 6/10 (60%)
Frame = +3
Query: 111 PWYQHHWTYV 140
PW+ +W V
Sbjct: 279 PWFSEYWEEV 288
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 18.2 bits (35), Expect = 9.6
Identities = 4/10 (40%), Positives = 6/10 (60%)
Frame = +3
Query: 111 PWYQHHWTYV 140
PW+ +W V
Sbjct: 369 PWFSEYWEEV 378
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.311 0.127 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,289
Number of Sequences: 438
Number of extensions: 884
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used: 2593980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.7 bits)
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