Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F10
(177 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 39 5e-04
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 37 0.002
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 37 0.002
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 36 0.003
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 35 0.007
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 31 0.11
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 29 0.33
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 0.33
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 29 0.43
At2g43330.1 68415.m05388 sugar transporter family protein simila... 27 2.3
At5g46150.2 68418.m05676 LEM3 (ligand-effect modulator 3) family... 26 4.0
At5g46150.1 68418.m05675 LEM3 (ligand-effect modulator 3) family... 26 4.0
At2g45440.1 68415.m05652 dihydrodipicolinate synthase 2 (DHDPS2)... 26 4.0
At1g32360.1 68414.m03989 zinc finger (CCCH-type) family protein ... 26 4.0
At1g10350.1 68414.m01166 DNAJ heat shock protein, putative simil... 26 4.0
At3g60880.2 68416.m06811 dihydrodipicolinate synthase 1 (DHDPS1)... 25 5.4
At3g60880.1 68416.m06810 dihydrodipicolinate synthase 1 (DHDPS1)... 25 5.4
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 25 9.4
At3g56300.1 68416.m06258 tRNA synthetase class I (C) family prot... 25 9.4
At3g03305.1 68416.m00328 calcineurin-like phosphoesterase family... 25 9.4
At2g35740.1 68415.m04386 sugar transporter family protein simila... 25 9.4
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 38.7 bits (86), Expect = 5e-04
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 10 TAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 162
TA ++ N + + D+ + WI++G P K VLG S G W L +D +
Sbjct: 214 TAGLHVSSNNEG-PSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD 263
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 13 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKL 147
A ++ P N P + DA WIQ G P K VLG G W+L
Sbjct: 223 AALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRL 265
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 13 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 162
A +Y P + P D + +W++ G P K V G G +W LD D +
Sbjct: 191 AGLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 36.3 bits (80), Expect = 0.003
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +1
Query: 13 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKL 147
AP+Y P P + DA + W Q G P K VLG G W L
Sbjct: 221 APLYDPITTGP--SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCL 263
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 35.1 bits (77), Expect = 0.007
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 APIYAPQN-RDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISRS 174
A ++ P N + P D + WI+ G P K VLG G TW L S ++ + S
Sbjct: 210 AALFDPSNPKGPC--GDYGLKEWIKAGLPAKKAVLGFPYVGWTWSLGSGNDAATS 262
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 13 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 162
A ++ P N ++ D+ ++ W++ P K VLG S G W L+ D+E
Sbjct: 211 AALFDPSNPAG-RSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLE-DAE 258
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 29.5 bits (63), Expect = 0.33
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 52 NADAAINYWIQNGAPTHKLVLGISTTGRTWKL 147
+ D+ + WI G P K VLG G W L
Sbjct: 125 SGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTL 156
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 41 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 151
++Y +PT++ + GF R LSLV+A L+ GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 29.1 bits (62), Expect = 0.43
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 13 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEIS 168
A +Y P + ++ D+ + W + G P K VLG G W L +D +++
Sbjct: 202 ASLYLPTDG---RSGDSGVRDWTEAGLPAKKAVLGFPYYGWAWTL-ADPDVN 249
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 41 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 151
++Y +PT++ + GF +L LSL+ A ++ G+ +
Sbjct: 294 VMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVV 330
>At5g46150.2 68418.m05676 LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein similar to GI:835763;
GI:4966357; GI:4585976; GI:11994416 from [Arabidopsis
thaliana]
Length = 343
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 6 LHCTDLRTAEPRSSTKRRRCYKLLDSKWCAYPQTCPWYQHHWTYVEARFRQ 158
L+ TD ++ P++ T+ + K + + Y Q +YQ+H YV++R Q
Sbjct: 93 LYITD--SSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSRSDQ 141
>At5g46150.1 68418.m05675 LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein similar to GI:835763;
GI:4966357; GI:4585976; GI:11994416 from [Arabidopsis
thaliana]
Length = 343
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 6 LHCTDLRTAEPRSSTKRRRCYKLLDSKWCAYPQTCPWYQHHWTYVEARFRQ 158
L+ TD ++ P++ T+ + K + + Y Q +YQ+H YV++R Q
Sbjct: 93 LYITD--SSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSRSDQ 141
>At2g45440.1 68415.m05652 dihydrodipicolinate synthase 2 (DHDPS2)
identical to dihydrodipicolinate synthase 2 (DHDPS2)
[Arabidopsis thaliana] GI:11066382
Length = 365
Score = 25.8 bits (54), Expect = 4.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 22 YAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEI 165
Y P R L+ D +N IQNGA +++G TTG + D I
Sbjct: 76 YLPDGRFDLEAYDDLVNIQIQNGA--EGVIVG-GTTGEGQLMSWDEHI 120
>At1g32360.1 68414.m03989 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 384
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 27 TAEPRSSTKRRRCYKLLDSKWCAYPQTC 110
TAE S K R C K + C Y ++C
Sbjct: 166 TAESGRSFKGRHCKKFYTEEGCPYGESC 193
>At1g10350.1 68414.m01166 DNAJ heat shock protein, putative similar
to SP|Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat
shock 40 kDa protein 1) {Mus musculus}; contains Pfam
profile PF00226: DnaJ domain
Length = 349
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 3 GLHCTDLRTAEPRSSTKRRRCYKLLDSKWCAYPQ 104
GL TDL TA ++ +++R Y +S++ YP+
Sbjct: 73 GLKSTDLPTAAETAAHQQQRSYSSSNSEFRYYPR 106
>At3g60880.2 68416.m06811 dihydrodipicolinate synthase 1 (DHDPS1)
(DHDPS) (DHPS1) identical to SP|Q9LZX6
Dihydrodipicolinate synthase 1, chloroplast precursor
(EC 4.2.1.52) (DHDPS 1) {Arabidopsis thaliana}
Length = 365
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 22 YAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEI 165
Y P R LQ D +N I+NGA +++G TTG + D I
Sbjct: 76 YLPDGRFDLQAYDDLVNTQIENGA--EGVIVG-GTTGEGQLMSWDEHI 120
>At3g60880.1 68416.m06810 dihydrodipicolinate synthase 1 (DHDPS1)
(DHDPS) (DHPS1) identical to SP|Q9LZX6
Dihydrodipicolinate synthase 1, chloroplast precursor
(EC 4.2.1.52) (DHDPS 1) {Arabidopsis thaliana}
Length = 364
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 22 YAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEI 165
Y P R LQ D +N I+NGA +++G TTG + D I
Sbjct: 75 YLPDGRFDLQAYDDLVNTQIENGA--EGVIVG-GTTGEGQLMSWDEHI 119
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 66 YKLLDSKWCAYPQTCPWYQHHWTYVE 143
Y L D K TCPW W VE
Sbjct: 199 YVLNDKKVQIVDTTCPWVTKVWNTVE 224
>At3g56300.1 68416.m06258 tRNA synthetase class I (C) family protein
similar to cysteinyl-tRNA synthetase [Methanococcus
maripaludis] GI:6599476; contains Pfam profile PF01406:
tRNA synthetases class I (C)
Length = 489
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 58 DAAINYWIQNGAPTHKLV 111
D+ +NYW+ NG T+ V
Sbjct: 240 DSGVNYWLHNGHVTNNNV 257
>At3g03305.1 68416.m00328 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 743
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 135 TSSGADTKDKFVGRRTILNPVI 70
TSSGAD K +++G+ ++ VI
Sbjct: 607 TSSGADRKHEYIGQPDVMVVVI 628
>At2g35740.1 68415.m04386 sugar transporter family protein similar
to proton myo-inositol transporter [Homo sapiens]
GI:15211933; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 41 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 151
++Y +PT+L G+ + L+L+++ L+ GS +
Sbjct: 295 VMYYSPTILQFAGYASNKTAMALALITSGLNAVGSVV 331
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.127 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,946,811
Number of Sequences: 28952
Number of extensions: 61649
Number of successful extensions: 142
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 12,070,560
effective HSP length: 38
effective length of database: 10,970,384
effective search space used: 219407680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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