Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_F09
         (519 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g56670.1 68414.m06517 GDSL-motif lipase/hydrolase family prot...    27   5.7  

>At1g56670.1 68414.m06517 GDSL-motif lipase/hydrolase family protein
           similarity to early early nodulin ENOD8 [Medicago
           sativa] GI:304037, lanatoside 15'-O-acetylesterase
           [Digitalis lanata] GI:3688284, elicitor-induced
           glycoprotein iEP4 [Daucus carota] GI:1911765; contains
           InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L
           family
          Length = 373

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 180 GKGPYTYHVTITCVSKPSLVC 242
           G  PY Y+V ITC  K S VC
Sbjct: 309 GGTPYNYNVKITCGHKGSNVC 329


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,267,588
Number of Sequences: 28952
Number of extensions: 169084
Number of successful extensions: 315
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)