Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F07
(661 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24180.1 68417.m03470 pathogenesis-related thaumatin family p... 31 0.90
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 30 1.2
At5g22540.1 68418.m02630 expressed protein contains Pfam profile... 29 2.1
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ... 29 2.1
At2g45870.1 68415.m05705 expressed protein contains Pfam profile... 29 2.1
At3g52970.1 68416.m05839 cytochrome P450 family protein cytochro... 28 4.8
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 28 6.3
At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH) domain... 27 8.4
At5g15510.1 68418.m01816 expressed protein 27 8.4
>At4g24180.1 68417.m03470 pathogenesis-related thaumatin family
protein similar to SP|P28493 Pathogenesis-related
protein 5 precursor (PR-5) {Arabidopsis thaliana};
contains Pfam profile PF00314: Thaumatin family
Length = 255
Score = 30.7 bits (66), Expect = 0.90
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 82 GIVTSLNRRVPREFRYGTQAVCKT 11
G VT LN++ P E R+G+ + CK+
Sbjct: 165 GCVTDLNQKCPTELRFGSGSACKS 188
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00628: PHD-finger, PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 1648
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 231 ARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQ 374
AR++I T+KR + P+ + +++N L+KL A C Q
Sbjct: 719 AREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHPQ 766
>At5g22540.1 68418.m02630 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 440
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 155 EAIRFLDIFEKTFVQSLQKGKFESYGKKIDFHDEKAINFV 274
EA LD+ KTFV + + + + K F+D + + FV
Sbjct: 217 EAKHLLDLIRKTFVPVPSQRRIKDHSSKSSFNDHEYLGFV 256
>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 364
Score = 29.5 bits (63), Expect = 2.1
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +2
Query: 122 DNYNLHSVKNYEAIRFLDIFEKTFVQSLQK-GKFESYGKKIDFHDEKAINFVGNYWQENA 298
DN LHSV + EA IFE V+ + G +++ ++ + F+ N EN
Sbjct: 33 DNNRLHSVFDAEASL---IFESWMVKHGKVYGSVAEKERRLTIFEDN-LRFINNRNAENL 88
Query: 299 DLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFMPSALDFYQTALRD 445
Y +T S GA P+P H FM S+ D Y+T+ D
Sbjct: 89 S-YRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSS-DRYKTSADD 135
>At2g45870.1 68415.m05705 expressed protein contains Pfam profile
PF05249: Uncharacterised protein family (UPF0187)
Length = 410
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +3
Query: 210 KANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHS 389
K++ + ++ KLIS +K S+ I +R + K+ L N + S S++HL H
Sbjct: 49 KSDDSPLSEKLISLLKAVPNWSDGIKERR-MQQKRSLYTHENWVRHRS----SLRHLRHV 103
Query: 390 TSTPSCPVRLTFTKPHF 440
+S+PS V L+ P F
Sbjct: 104 SSSPSSRVILSLIPPVF 120
>At3g52970.1 68416.m05839 cytochrome P450 family protein cytochrome
P450 76A2, eggplant, PIR:S38534
Length = 516
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 233 KKIDFHDEKAINFVGNYWQENADLYE----EEVTKDY 331
+K FH EKA G + +E ++ E +E TKDY
Sbjct: 242 RKTQFHVEKAFEIAGEFIRERTEVREREKSDEKTKDY 278
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 27.9 bits (59), Expect = 6.3
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
Frame = +2
Query: 284 WQENADLYEEEVTKDYQ-RSYEIVARHV---LGAAPKPFD---KHTFMPSALDFYQTALR 442
W L+ EE + Y+ Y+I A + GA+ K D T+ L + +
Sbjct: 139 WIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVDFNASQTYRTRMLSDEELLEQ 198
Query: 443 DPAFYQLYXRIVGYI---NAFKHYLKPYPQE---KLHF-VGV*INDVVVEKLVTFFDYSX 601
PA QL R++G +A+ +YL Y K F + IND ++ + FF+ S
Sbjct: 199 LPALQQLLYRLIGCQPEGSAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSR 258
Query: 602 FDATNSVFLTKK 637
DA ++ + K+
Sbjct: 259 HDAVKALNIYKR 270
>At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related low similarity to clathrin assembly
protein AP180 [Xenopus laevis] GI:6492344; contains Pfam
profile PF01417: ENTH domain
Length = 591
Score = 27.5 bits (58), Expect = 8.4
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Frame = +2
Query: 284 WQENADLYEEEVTKDYQ-RSYEIVARHVLGAAPKPFDKH-TFMPSALDFYQTALRDPAFY 457
W L+ EE + Y+ Y+I A + A+ H T M S D + PA
Sbjct: 139 WVRTYALFLEERLECYRVLKYDIEAERLPKASGAASKTHRTRMLSGEDLLEQL---PALQ 195
Query: 458 QLYXRIVGYIN---AFKHYLKPYPQE---KLHF-VGV*INDVVVEKLVTFFDYSXFDATN 616
QL R++G A+ +YL Y K F + IND ++ + FF+ S DA
Sbjct: 196 QLLYRLIGCQPEGAAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSRHDAVK 255
Query: 617 SVFLTKK 637
++ + K+
Sbjct: 256 ALNIYKR 262
>At5g15510.1 68418.m01816 expressed protein
Length = 497
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 236 KIDFHDEKAINFVGNYWQENA---DLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFM 406
+ D+ + ++F+ Y E L EEE + ++ E+V + A P P+ F+
Sbjct: 397 EFDYQVAEKMSFIEQYKMERERQQKLAEEEEIRRLRK--ELVPK----AQPMPYFDRPFI 450
Query: 407 PSALDFYQTALRDPAFY 457
P + TA RDP F+
Sbjct: 451 PRRSSKHPTAPRDPKFH 467
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,546,522
Number of Sequences: 28952
Number of extensions: 274478
Number of successful extensions: 742
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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