Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_F05
         (484 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13146| Best HMM Match : Laminin_G_2 (HMM E-Value=1.5e-25)           50   1e-06
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)                 43   2e-04
SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34)           40   8e-04
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.002
SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.010
SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.040
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)                 34   0.053
SB_7343| Best HMM Match : EGF (HMM E-Value=0)                          33   0.093
SB_39328| Best HMM Match : Laminin_G_2 (HMM E-Value=0)                 31   0.50 
SB_59235| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_23318| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_33543| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.6  
SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)          27   8.1  
SB_43678| Best HMM Match : Ribonuclease_BN (HMM E-Value=0.81)          27   8.1  
SB_33928| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.1  
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.1  

>SB_13146| Best HMM Match : Laminin_G_2 (HMM E-Value=1.5e-25)
          Length = 614

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
 Frame = +3

Query: 9   GVVVLDWDFGSGTSTITIENIRVNDGERHQIIAKLHEDNTVSLSVDSVTRTGTTTGLSNL 188
           G V  D D G+G S +  E IRV+DGE H ++    E  T+++SVD+    G T    + 
Sbjct: 493 GKVFYDSDLGTGRSKVYAEGIRVDDGEWHSVVI-TREKKTLAISVDNGRAKGQTDTRGDF 551

Query: 189 MNADSNIYIG---GIPDRINLRG-YPGLIGCIEQVELMG 293
              D    +G   G+P  +  +G  P  IGCI    + G
Sbjct: 552 NKIDLPNSVGLILGVPSTV--KGLVPNFIGCIRDFSVDG 588


>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
          Length = 897

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
 Frame = +3

Query: 9    GVVVLDWDFGSGTSTITIENIRVNDGERHQIIAKLHEDNTVSLSVDSVTRTGTTTGLS-N 185
            G++ + +D G G  T+      ++DG  H  +  + +     L VD   + G  +     
Sbjct: 784  GILEVRYDLGVGRETVIRSTATLDDGYWHS-VKFVRKSLAAYLKVDDEIKAGIASDSQYR 842

Query: 186  LMNADSNIYIGGIPDRINLRGYPGLIGCIEQVELMGTSRGLNLGQVAVAGRNTQRCREY 362
             +N+D  ++IGG P  ++ R   GL+GC++  +L+     ++L     +G+N + C  Y
Sbjct: 843  QLNSDV-LFIGGAP-TVDRRFMSGLVGCLK--DLIVGDVPVDLASEVTSGQNVRPCSAY 897


>SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34)
          Length = 1071

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +3

Query: 111 LHEDNTVSLSVDSVTRTGTTTGLSNLMNADSNIYIGGIPDRINLRGYPGLIGCIEQVELM 290
           LH    + L +D   R G+  G S +    S +YIGG        G P   GCI+ V + 
Sbjct: 121 LHHGTGICLRLDGKWRNGSIPGPSFVKITSSKVYIGGTTSLEKELGIPNFQGCIKNVHVE 180

Query: 291 GTS 299
           GT+
Sbjct: 181 GTN 183



 Score = 31.9 bits (69), Expect = 0.28
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +3

Query: 114 HEDNTVSLSVDSVTRTGTTTGLSNLMNADSNIYIGGIPDRINLRGYPGLIGCIEQVELMG 293
           H+   +S    +       TG S +    S +YIGG        G P   GCI+ V + G
Sbjct: 810 HKQGRLSKPAQNPVSLCHLTGPSFVKITSSKVYIGGTTSLEKELGIPNFQGCIKNVHVEG 869

Query: 294 TS 299
           T+
Sbjct: 870 TN 871


>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2680

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
 Frame = +3

Query: 27   WDFGSGTSTITIENIRVNDGERHQIIAKLHEDNTVSLSVDSV-TRTGTTTGLSNLMNADS 203
            +D  +G +  T+      D  +   +    +D+  +L+VD + T +G+++G S  ++  +
Sbjct: 1398 FDCQTGPAAFTVSAAVTFDDNQWHRLQLTRKDSVGTLTVDGIYTASGSSSGASTFISMGT 1457

Query: 204  NIYIGGIP-DRINLRGYP--------GLIGCIEQVELMGT 296
             +YIGG+P D I  R  P          IGCI+ V   G+
Sbjct: 1458 GVYIGGLPTDFIITRSDPPAARVGRYPFIGCIKSVTSQGS 1497


>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3610

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 36   GSGTSTITIENIRVNDGERHQIIAKLHEDNTVSLSVDSVTR-TGTTTGLSNLMNADSN-I 209
            G+    I I N ++N    H I  +  + N  SL +D   + TG++ G S LMN D   I
Sbjct: 2995 GNHLKIIRIPNSQLNTSMHHNIYVR-RKGNKASLQLDFAGKATGSSGGSSQLMNLDGGAI 3053

Query: 210  YIGGIP 227
            + GG+P
Sbjct: 3054 FSGGLP 3059


>SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1651

 Score = 34.7 bits (76), Expect = 0.040
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
 Frame = +3

Query: 81   DGERHQIIAKLHEDNTVSLSVDSVTRTGTTTGLSNLMNADSNIYIGGIPDRINLRGYPG- 257
            D + H+I  +  E N ++LSVD    +  T  L +L       YIGG+PD      + G 
Sbjct: 1555 DNQFHEIRLQRAERN-ITLSVDK--HSPLTYALPDLFLLTGKFYIGGVPDNSGADSHIGF 1611

Query: 258  ----LIGCIEQVELMGTSRGLNLGQVAVAGRN-TQRCR 356
                L GC+E + +  T     L   AV G+  TQ CR
Sbjct: 1612 SKVRLDGCVESLRI-DTKLVELLRAPAVLGQGVTQGCR 1648



 Score = 29.5 bits (63), Expect = 1.5
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
 Frame = +3

Query: 15   VVLDWDFGSGTSTITIENIRVNDGERHQIIAKLHEDN-TVSLSVDSVTRTGTTTGLSNLM 191
            V   +D G G  TIT   + V  G  +++ A  +  N  +S++  S+  + T    +N +
Sbjct: 725  VQFTFDLGPGPITITNWEVTVRQGNWYRVYASRYNKNGRLSVTDYSMNYSRTYESNTNQI 784

Query: 192  NADSNI--------YIGGIPDRINLRGYPGLI-GCIEQV 281
              ++NI        YIGG+P+ +          GCI+ V
Sbjct: 785  VPNTNINFTSASPLYIGGLPEGVMPNQTQRFFRGCIDNV 823


>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
          Length = 683

 Score = 34.3 bits (75), Expect = 0.053
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = +3

Query: 6   RGVVVLDWDFGSGTSTITIENIRVNDGERHQIIAKLHEDNTVSLSVDSVTRTGTTTGLS- 182
           RGV+V+  D G+G   ++I   +++D   H+   K    N V L++D   +   T   S 
Sbjct: 302 RGVLVMQLDIGAGMLKLSIGE-KLSDARWHRAEIKRARRN-VKLTLDERLKVDGTCPPSL 359

Query: 183 ---NLMNADSNIYIGGIPD 230
              N+   +  +YIGG+ D
Sbjct: 360 TAFNMQGGEGRVYIGGVSD 378


>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1233

 Score = 33.5 bits (73), Expect = 0.093
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
 Frame = +3

Query: 27   WDFGSGTST-ITIENIRVNDGERHQIIAKLHEDNTVSLSVDSVTRTGTTTGLSNLMNADS 203
            +D GSG     T + + +N  E   I+ +     ++ L+ D      T+ G +  ++  S
Sbjct: 1112 FDLGSGIGFGQTTQPVTINT-EVTVILNRTRNSGSLQLNNDPPVAF-TSPGNAVALDVTS 1169

Query: 204  NIYIGGIP--DRINLRGYPGLI------GCIEQVELMGTSRGLNLGQV-AVAGRNTQRC 353
            N+Y+GG P    +N R    +I      GCI + ++   ++ L L +V AV+GRN   C
Sbjct: 1170 NLYLGGAPQLSSVNPRAVEDVISLRDYTGCISEAKV--NNQALVLTEVGAVSGRNIDNC 1226


>SB_39328| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
          Length = 1049

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 132 SLSVD-SVTRTGTTTGLSNLMNADSNIYIGGIPDRINLRGYPGL 260
           SL VD ++   G  +   +L++   ++YIGG+PD + L   PGL
Sbjct: 572 SLFVDGNLVHAGWFSSTRHLLHLGGSVYIGGVPDNVTLS--PGL 613



 Score = 27.5 bits (58), Expect = 6.1
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 204  NIYIGGIPDRINLRGY-PGLIGCIEQVELMG 293
            ++YIGG P  +   G  PG IGCI  + + G
Sbjct: 996  SLYIGGEPGGMREDGSNPGFIGCIRNIYVNG 1026


>SB_59235| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 106

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 201 SNIYIGGIPDRINLRGYPGLIGCIEQVELMGTS 299
           S +YIGG        G P   GCI+ V + GT+
Sbjct: 10  SKVYIGGTTSLEKELGIPNFQGCIKNVHVEGTN 42


>SB_23318| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 500

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/60 (23%), Positives = 28/60 (46%)
 Frame = +3

Query: 177 LSNLMNADSNIYIGGIPDRINLRGYPGLIGCIEQVELMGTSRGLNLGQVAVAGRNTQRCR 356
           L N++N  +   +G + + +N R    ++  +   +L     GLN  Q +++  N   CR
Sbjct: 431 LGNVLNGLNARQLGNVLNGLNARQLGNVLNGLNARQLGNVLNGLNARQFSISSNNPVNCR 490


>SB_33543| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 838

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 135 LSVDSVTRTGTTTGLSNLMNADSNIYIGGI 224
           LSVD ++ T  T G  + +N D  I+IGG+
Sbjct: 113 LSVDDLSTTKITPGPYDHLNLDGLIFIGGL 142


>SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)
          Length = 1001

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 186 LMNADSNIYIGGIPDRINLRGYPGLIGCIEQVELMGTSRGLNLG 317
           +M AD  +YIGG+ D     GY  L      +E + ++ G+  G
Sbjct: 17  VMAADKPLYIGGLFDLSTKHGYGALPAAEMAIEEINSNAGILSG 60


>SB_43678| Best HMM Match : Ribonuclease_BN (HMM E-Value=0.81)
          Length = 468

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +1

Query: 22  WIGTLAVVLQLLRSKIFE*TTVKDIR*SQNYTKTIQFHCLWIVLLERAQPPAFPIS*TLT 201
           W+ T++  +  + +     T V  +  S  +  T+ F+  W+V +  +    F +S ++T
Sbjct: 313 WVVTVSSSVTSVVTVSSSVTWVVTVSFSVTWVVTVSFNVTWVVTVCSSVTWVFTVSYSVT 372

Query: 202 LIFTLVAYQT--VSTCEAI 252
           L+ T+ +  T  V+ C ++
Sbjct: 373 LVVTVSSSVTWVVTVCSSV 391


>SB_33928| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 311

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
 Frame = +3

Query: 33  FGSGTSTI---TIENIRVNDGERHQIIAKLHEDNTVSL------SVDSVTRTGT 167
           F S TS+I   TI     +   RH+II  +H+D+ ++L      SV S   TGT
Sbjct: 63  FASKTSSIIRFTIPENGTDTSHRHEIIHGIHQDSVIALDACANGSVFSCDSTGT 116


>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 639

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 212 HWWHTRPYQPARLSRPHRLH 271
           HWW+ RP +P + +RP R H
Sbjct: 605 HWWN-RPTKPPKPTRPPRPH 623


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,494,102
Number of Sequences: 59808
Number of extensions: 292183
Number of successful extensions: 738
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)