Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F04
(609 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 285 6e-76
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 283 2e-75
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 254 1e-66
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 191 1e-47
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 187 2e-46
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 186 4e-46
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 164 1e-39
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 146 5e-34
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 132 6e-30
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 125 9e-28
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 124 2e-27
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 122 7e-27
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 122 9e-27
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 116 3e-25
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 114 1e-24
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 110 3e-23
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 107 2e-22
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 107 3e-22
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 102 8e-21
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 5e-20
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 89 6e-17
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 88 1e-16
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 88 1e-16
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 88 2e-16
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 85 2e-15
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 79 6e-14
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 77 2e-13
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 75 1e-12
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 75 1e-12
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 73 4e-12
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 72 1e-11
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 71 3e-11
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 69 9e-11
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 68 2e-10
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 68 2e-10
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 64 2e-09
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 64 2e-09
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 62 1e-08
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 61 2e-08
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 60 3e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 4e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 58 2e-07
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 56 7e-07
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 56 9e-07
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 55 1e-06
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 2e-06
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 54 3e-06
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 54 3e-06
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 53 6e-06
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 52 1e-05
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 49 8e-05
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.002
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 41 0.020
UniRef50_UPI000150A24A Cluster: hypothetical protein TTHERM_0050... 34 2.3
UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protei... 34 3.0
UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Re... 34 3.0
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 33 5.3
UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole... 33 7.0
UniRef50_UPI00005874CE Cluster: PREDICTED: similar to OTTHUMP000... 32 9.3
UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6; ... 32 9.3
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 285 bits (699), Expect = 6e-76
Identities = 133/170 (78%), Positives = 151/170 (88%)
Frame = +1
Query: 61 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 240
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 241 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 420
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 421 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 283 bits (695), Expect = 2e-75
Identities = 132/170 (77%), Positives = 151/170 (88%)
Frame = +1
Query: 61 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 240
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 241 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 420
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 421 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDKVGAS
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGAS 170
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 254 bits (622), Expect = 1e-66
Identities = 114/170 (67%), Positives = 144/170 (84%)
Frame = +1
Query: 61 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 240
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 241 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 420
+RKA++ HLE NP LEK+LPH+KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 421 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+KVGAS
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGAS 170
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 191 bits (466), Expect = 1e-47
Identities = 93/172 (54%), Positives = 125/172 (72%), Gaps = 2/172 (1%)
Frame = +1
Query: 61 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 240
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 241 MRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 414
M+++++ H E N A+ LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 415 LSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+S
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSS 172
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 187 bits (456), Expect = 2e-46
Identities = 90/170 (52%), Positives = 121/170 (71%)
Frame = +1
Query: 61 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 240
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 241 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 420
+RKAIK+ ET P LE+LLPHIKGNVGF+FT+GDL ++ KL E K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 421 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG S
Sbjct: 128 VIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVS 177
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 186 bits (453), Expect = 4e-46
Identities = 91/167 (54%), Positives = 122/167 (73%), Gaps = 2/167 (1%)
Frame = +1
Query: 76 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 255
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 256 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 429
+ H + N A LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 430 PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+S
Sbjct: 127 QPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSS 173
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 164 bits (399), Expect = 1e-39
Identities = 84/171 (49%), Positives = 112/171 (65%), Gaps = 1/171 (0%)
Frame = +1
Query: 61 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 240
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 241 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPL 417
+R A+K +L+ P +EKLLP +K N+GFVF + DL ++R+ +L+NK + PAR G IAP+
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 418 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
V IP TG+ P TSF ++L I TKI KG IEI VH++K G+KV AS
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTAS 171
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 146 bits (353), Expect = 5e-34
Identities = 72/161 (44%), Positives = 103/161 (63%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 267
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 268 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 447
++ P L+ L ++K N +F + ++ +V+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 448 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
+ P +TSF Q L I TKI++G I+I+N+VHI+K G KVGAS
Sbjct: 129 MEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGAS 169
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 132 bits (319), Expect = 6e-30
Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 18/188 (9%)
Frame = +1
Query: 61 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR-ISLRGHSIVLMGKNT 237
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR I + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 238 MMRKAIKDHLETNPA-----------------LEKLLPHIKGNVGFVFTRGDLVDVRDKL 366
+ +K + ++ P L+ L + G VGF+FT + D++ +
Sbjct: 61 LFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPII 120
Query: 367 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILK 546
ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I D +LK
Sbjct: 121 EENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLK 180
Query: 547 PGDKVGAS 570
G KVG S
Sbjct: 181 TGQKVGQS 188
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 125 bits (301), Expect = 9e-28
Identities = 73/174 (41%), Positives = 104/174 (59%)
Frame = +1
Query: 76 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 255
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 256 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 435
+ L+ + L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI
Sbjct: 69 -NQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEP 126
Query: 436 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS*SYSSQHVE 597
T GP++ F+ AL I TKI+KG IEI+N V+++K GD V S + Q +E
Sbjct: 127 MLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLE 180
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 124 bits (298), Expect = 2e-27
Identities = 68/188 (36%), Positives = 114/188 (60%), Gaps = 18/188 (9%)
Frame = +1
Query: 61 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNT 237
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR + S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 238 MMRKAIKDHL------ETN-----------PALEKLLPHIKGNVGFVFTRGDLVDVRDKL 366
+++ A++ + E++ P +E L+ +KGN+G +FT DL D++D +
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDII 120
Query: 367 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILK 546
+ +APAR G++A V I A TGL P++T+FFQ L+IPTKI+K IEI D I+
Sbjct: 121 DRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIIT 180
Query: 547 PGDKVGAS 570
G+KVG++
Sbjct: 181 EGEKVGSN 188
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 122 bits (294), Expect = 7e-27
Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 9/170 (5%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 267
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 268 ETNPA--LEKLLPH-------IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 420
E A +KLL + + GN +FT ++ + L +++VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCD 127
Query: 421 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+V S
Sbjct: 128 VIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNS 177
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 122 bits (293), Expect = 9e-27
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 17/178 (9%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 267
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 268 -ETN----------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPAR 396
E N P LE L+P ++GNV +F ++ +V + E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 397 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
G IAP V + TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG S
Sbjct: 123 AGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNS 180
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 116 bits (280), Expect = 3e-25
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Frame = +1
Query: 73 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKA 252
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 253 IK---DHLETN-------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQ 384
++ L T+ P L L+PH+K + +VF + ++ K+ V
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVP 126
Query: 385 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 564
APAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI +V + G K+G
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIG 186
Query: 565 AS 570
S
Sbjct: 187 NS 188
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 114 bits (275), Expect = 1e-24
Identities = 66/175 (37%), Positives = 103/175 (58%)
Frame = +1
Query: 46 FTQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLM 225
F M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LM
Sbjct: 20 FFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLM 79
Query: 226 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 405
GKN+ +R+AI D P L + +KG+V FVF +G+ D++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 406 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
+A V + + TG+ P+KTS+FQAL I TKI+KG +EII+ +L GDKVG S
Sbjct: 138 VAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPS 192
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 110 bits (264), Expect = 3e-23
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 3/173 (1%)
Frame = +1
Query: 52 QSKMGREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLM 225
Q G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M
Sbjct: 8 QPPSGYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRM 67
Query: 226 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 405
+NT+MR A+++ L+ P LE LL +I+G V F+FT D + L E+K APA+PG
Sbjct: 68 SRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGD 127
Query: 406 IAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
IAP +V+P T P S Q +P +I G + I D ++K G+++
Sbjct: 128 IAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEI 180
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 107 bits (257), Expect = 2e-22
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDH 264
K +Y K+ L +Y K +V + NV + Q+ IR L H VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 265 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 444
E P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRT 130
Query: 445 GLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
+ P AL+I KI KGTIEI + ++ G KVGAS
Sbjct: 131 SMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGAS 172
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 107 bits (256), Expect = 3e-22
Identities = 53/158 (33%), Positives = 91/158 (57%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 267
KS F K L ++ + +V +N+ S+Q+++ + L SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 268 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 447
+ + ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTN 128
Query: 448 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
+ P+ FQ+L+IPTKI KG IEII + +L+ G K+
Sbjct: 129 ISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKI 166
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 102 bits (244), Expect = 8e-21
Identities = 62/139 (44%), Positives = 72/139 (51%)
Frame = -2
Query: 515 IVPFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 336
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 335 RVKTKPTFPLM*GSSFSRAGFVSRWSLMAFLIMVFLPMSTML*PRNEXXXXXXXCEPTLS 156
VKTKPT PL G++FS++G + LMA L MVFLP+ T P N E TLS
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLS 120
Query: 155 APTMKHFGYSSNSWMILTK 99
PT YSS + L K
Sbjct: 121 TPTTNKDLYSSKYSLNLAK 139
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect(2) = 5e-20
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +1
Query: 244 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 381
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 50.0 bits (114), Expect(2) = 5e-20
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 478 ALSIPTKISKGTIEIINDVHILKPGDKV 561
ALSIP KISKGTIEIINDV ILK GDK+
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI 765
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 89.4 bits (212), Expect = 6e-17
Identities = 53/150 (35%), Positives = 75/150 (50%)
Frame = -1
Query: 570 RSSHLITRFQDMDIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTS 391
RS+ +T D+++ DNFN T NL + +SLEERSL V N D W N + +
Sbjct: 157 RSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSG 216
Query: 390 RGLDFVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHNA 211
+ V I + GED+ N++LD R+Q F W D HGV H+ N+
Sbjct: 217 WSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDSSSDHGVLTHQDNS 276
Query: 210 VTTQ*NTDLLHLLRAYIVRTHYETFWVFVQ 121
+Q +D +HLL +IV T+ E VF Q
Sbjct: 277 SASQVLSDFVHLLGRHIVNTNNEDRLVFFQ 306
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 88.2 bits (209), Expect = 1e-16
Identities = 47/155 (30%), Positives = 82/155 (52%)
Frame = +1
Query: 106 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 285
K I LL+ Y IV +N+ S+Q+ IR LRG S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 286 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 465
+ ++ N+G +FT +L + + + + + G IA +++I L P +T
Sbjct: 71 MSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQT 130
Query: 466 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
FFQAL IPT+ISK +IEII D+ ++ + S
Sbjct: 131 PFFQALGIPTRISKSSIEIIEDILLVSKNQALNKS 165
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 88.2 bits (209), Expect = 1e-16
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Frame = +1
Query: 79 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVL-MGKNTMMRKAI 255
A WK ++ +L+ YP +V ++ + + Q+R +R + +L + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 256 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 429
K + P LEKL+ +I G + T + + L +N+ APA+PGA+ P VV+
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 430 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
PA T L P QAL IP +I KG + I D +LK G+ +
Sbjct: 125 PAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVI 169
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/165 (26%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Frame = +1
Query: 70 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 249
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 250 AIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 429
A++ E L+ L +++G VG V T + + +L +K AP G +AP +V+
Sbjct: 70 ALE---EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVV 126
Query: 430 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
P +TG+ P Q + +I +G+I++++D + + G+ V
Sbjct: 127 PEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETV 171
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 84.6 bits (200), Expect = 2e-15
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Frame = +1
Query: 85 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 264
WK ++ +L+ ++ I + + + Q R LRGH +V + +N + A++
Sbjct: 21 WKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALRRI 80
Query: 265 L--ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 438
N +EK ++ G GF+FT + D+ +++N V+ A+PG + +++PA
Sbjct: 81 YGDSVNAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAG 137
Query: 439 NTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
NTG+ P S F L IPT+I G I + D + KPGD V
Sbjct: 138 NTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTV 179
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 79.4 bits (187), Expect = 6e-14
Identities = 45/162 (27%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Frame = +1
Query: 79 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 258
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 259 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 438
+ +E L +++G VFT+ + + L ++K +APA+ G+IAP +V+PA
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAG 122
Query: 439 NTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
+T P Q + IP KI KG+I + +D I+ G+++
Sbjct: 123 DTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEI 164
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 77.4 bits (182), Expect = 2e-13
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +1
Query: 115 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKL 294
+LL +YP F+ + S+ + + R LR + ++ + K T+ + A PA ++
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EI 86
Query: 295 LPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSF 471
++G VGF FT + +V + EN V+ A+PG AP +V+PA T P S
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISK 146
Query: 472 FQALSIPTKISKGTIEIINDVHILKPGDKV 561
F L IPT++ +G I I D + K G ++
Sbjct: 147 FGKLKIPTRVQEGKIWIAKDTVVAKAGQEI 176
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 74.9 bits (176), Expect = 1e-12
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Frame = +1
Query: 79 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 258
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 259 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLEN-KVQAPARPGAIAPLSVVIPA 435
+ +EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA
Sbjct: 74 N---AGIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPA 129
Query: 436 HNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 567
+TG+ GP S F L + TK+ G + ++ D + KPGD + A
Sbjct: 130 GDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPA 174
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 74.9 bits (176), Expect = 1e-12
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Frame = +1
Query: 79 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 258
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 259 DHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 432
+ E NP KL+ ++ V T + + L E+K AP + GAIAP + +
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVK 130
Query: 433 AHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
+ +TG+ P S +A+ IP I KG I I D + K GD +
Sbjct: 131 SGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVI 174
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 73.3 bits (172), Expect = 4e-12
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Frame = +1
Query: 145 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 324
+V +++ + Q+ +R LR K+ + RKA+ P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 325 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 498
+FT + L +NK AR G IA + V +PA NTG+ GP T F +A IPTK
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTK 133
Query: 499 ISKGTIEIINDVHILKPGDKVG 564
I +GTI I+ D +K G+ +G
Sbjct: 134 IDQGTIWILKDTTPVKKGEPIG 155
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 71.7 bits (168), Expect = 1e-11
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 267
K+ + ++ +L +Y I+ + V S Q+ +R +L+ K+ + +KA+++
Sbjct: 12 KTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN-- 69
Query: 268 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 447
P ++ ++ KG V +FT + L +NK+ AR G IA + VV+PA NTG
Sbjct: 70 SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTG 129
Query: 448 L--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
+ GP T F +A IPTKI +GTI I D + G+ +
Sbjct: 130 IAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAI 168
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 70.5 bits (165), Expect = 3e-11
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDH 264
K+ ++ L +Y + + + ++ R LR S++ + KNT+ A+K+
Sbjct: 17 KAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN- 75
Query: 265 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 444
T +E + H++G +FT + ++ L + K+ AR G IA +V+PA NT
Sbjct: 76 --TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNT 133
Query: 445 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
G+ P S F L IPT++ +G+I I D + KPGD +
Sbjct: 134 GIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVI 173
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 68.9 bits (161), Expect = 9e-11
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 267
K +I + D Y +++ + N+ S QQ+R S++G++ + MGKN +MR A+
Sbjct: 33 KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTE 92
Query: 268 ETNPALE--KLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 441
E + + +L +KG G +FT VR L AR G +A ++VIP
Sbjct: 93 EESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--Q 150
Query: 442 TGLGPEKTSF-----FQALSIPTKISKGTIEIINDVHILKPGDKVGAS*SYSSQHVEHL 603
L +K SF + L +PT + I ++ D + K GD + ++ + +H +H+
Sbjct: 151 GPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCKEGDVLTSAQARLLKHFDHV 209
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 68.1 bits (159), Expect = 2e-10
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Frame = +1
Query: 85 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 264
WK + +I + ++E+ +V + + Q+QQIR +LRG + V M +NT++ A+
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALN-- 68
Query: 265 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 444
E ++ L H +G +FT + + L + K + A+PG AP +VIP T
Sbjct: 69 -ELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 445 GLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
P Q + IP I G ++I ++K G+ +
Sbjct: 128 SFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVI 167
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 67.7 bits (158), Expect = 2e-10
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Frame = +1
Query: 85 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 264
WK + L YP I + Q+Q++R L + + KN ++ +A+++
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 265 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 444
E+LL G +FT + ++ L + K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 445 GLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
GL P S F L IPT+I +I I D + KPGD +
Sbjct: 132 GLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTI 171
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 64.5 bits (150), Expect = 2e-09
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Frame = +1
Query: 67 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMM 243
RE WK ++ + L E ++ + + + R R + + KN ++
Sbjct: 13 REKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLV 72
Query: 244 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 423
RKA + P +++ + G+ F+FT + + K+ + + APA+PG +A +
Sbjct: 73 RKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEI 130
Query: 424 VIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
V+PA +TGL P S F L I T + GTI I D + KPGD +
Sbjct: 131 VVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVI 177
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 64.1 bits (149), Expect = 2e-09
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Frame = +1
Query: 85 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 264
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSF--- 67
Query: 265 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 444
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T
Sbjct: 68 --GGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 445 GLGP-EKTSFFQALSIPTKISKGTIEI 522
L P Q L IP+ I G + +
Sbjct: 126 SLRPGPVVGELQNLGIPSGIDGGKVVV 152
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 62.1 bits (144), Expect = 1e-08
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Frame = +1
Query: 49 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 228
TQ+K REDK +I + L++Y + N+ + +QQIR G S + +G
Sbjct: 15 TQAKT-REDK----DKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLG 69
Query: 229 KNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 402
N +M AI E+ L KL P + G G +FT +V++ AR G
Sbjct: 70 NNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTG 129
Query: 403 AIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 567
A S+V+ P L +P K+ +G I ++ D + +PGD + A
Sbjct: 130 QTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPGDTLSA 185
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 61.3 bits (142), Expect = 2e-08
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Frame = +1
Query: 85 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 264
WK + KI+ + + IV V + +Q++R +L G + M +NT+ A D
Sbjct: 16 WKKDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DS 74
Query: 265 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 444
L ++L ++ G + V+T + + L K + A+ G IAP +VIP T
Sbjct: 75 LPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 445 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 567
P FQ + IP I G + I + ++K G+K+ A
Sbjct: 135 SFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISA 176
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 60.5 bits (140), Expect = 3e-08
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Frame = +1
Query: 85 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 258
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 259 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 438
E P L KL + G VG +FT +V + AR G +A +V +PA
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAG 141
Query: 439 N-TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 552
++L +PTK+ KG + + +D + + G
Sbjct: 142 PLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.1 bits (139), Expect = 4e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 211 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 390
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 391 ARPGAIAPLSVVIPAHNTGL 450
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 166 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 339
G + + R +V + K + + + H E NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 340 DLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 450
DL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 274 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 450
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 57.6 bits (133), Expect = 2e-07
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Frame = +1
Query: 145 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 324
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 325 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 498
+ T ++ + +E+KV P + G IAP +VIP T + GP +T +AL + TK
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTK 142
Query: 499 ISKGTIEIINDVHILKPGDKV 561
++ G IEI+ D ++K G+ V
Sbjct: 143 VTSGKIEIVEDAVVVKEGEIV 163
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 56.0 bits (129), Expect = 7e-07
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 261
K ++ + +D Y FI N+ + +++ +R + + HS + GKN +M A+ +
Sbjct: 30 KQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGREP 88
Query: 262 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 441
E L ++ H++G VG +FT +V + K AR G A +V +
Sbjct: 89 SSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGP 148
Query: 442 TGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGD 555
P + L +PT + KG + +++D + K GD
Sbjct: 149 LEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 187
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 55.6 bits (128), Expect = 9e-07
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +1
Query: 85 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 264
WK ++++ + + G + + + Q++R LR S V + N + R+AI
Sbjct: 14 WKLREVDELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI--- 70
Query: 265 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 444
L+++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 445 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
P Q+ IP I G + I V + K GD +
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVI 170
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 55.2 bits (127), Expect = 1e-06
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Frame = +1
Query: 55 SKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKN 234
+K+ ++ K T K+N ++ +D+Y FI N+ S + IR + +S GKN
Sbjct: 13 TKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKN 71
Query: 235 TMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 408
++ A+ A L K +KG G +FT +V + E + AR G +
Sbjct: 72 NVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDV 131
Query: 409 APLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS*SYSS 585
A +VV+P + + L +PTK+ KG I + + K G+ + +
Sbjct: 132 ATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKIL 191
Query: 586 QHVE 597
+H E
Sbjct: 192 KHFE 195
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 54.8 bits (126), Expect = 2e-06
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Frame = +1
Query: 85 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 264
WK + I +L+ + +V + + + ++Q+IR L+ +++ + +NT+ +A+
Sbjct: 14 WKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQL 73
Query: 265 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 444
E+ P + + L + +FT + L + K +P + GAIAP +++ T
Sbjct: 74 GESIPEMTRYLDN---QTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 445 GLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
P Q+ IP I G + + + K G+ V
Sbjct: 131 SFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAV 170
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 54.0 bits (124), Expect = 3e-06
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KDH 264
K K+ Q LDEY + ++V N +Q++ +IR ++ + L G N + A+ K H
Sbjct: 17 KKQDVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTH 75
Query: 265 LET-NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 441
++ P L L ++KG +FT+ ++R++L + RPGA A +V I +
Sbjct: 76 KDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGP 135
Query: 442 TGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGD 555
P + L +P K+ +G + + D + D
Sbjct: 136 LPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 174
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +1
Query: 88 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 267
K F I + + Y CF+ DN+ + ++ +R L I GK + +A+
Sbjct: 23 KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELNDCRI-FFGKTKLTARALGTTP 81
Query: 268 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 435
E A L+KL ++ G+VG +FT D +++D + AR G++A ++ IP+
Sbjct: 82 EDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 52.8 bits (121), Expect = 6e-06
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Frame = +1
Query: 106 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 285
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+ D L +
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--Y 74
Query: 286 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EK 462
KL ++ + + + + + + KV +P +P ++P+ VV+ T + P
Sbjct: 75 LKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPL 134
Query: 463 TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
+ Q +P I KG + + ++K G+ V
Sbjct: 135 MAELQMAGLPVAIEKGKVVVKATTTVVKAGEVV 167
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 52.0 bits (119), Expect = 1e-05
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Frame = +1
Query: 49 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 228
TQ+K ++D+ WKS ++ L E ++ +N+ + +++R + + +G
Sbjct: 13 TQTK--KKDRE-WKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAATEATTTFFVG 69
Query: 229 KNTMMRKAI-KD-HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 402
N ++R A+ +D E + L +KG+ G +FT DV V+ AR G
Sbjct: 70 SNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTG 129
Query: 403 AIAPLSVVI---PAHN-TGLGPEKT--SFFQALSIPTKISKGTIEIINDVHILKPGDKV 561
A+A +V + P H +G E T + +PTK+++G IE+ + + K G +
Sbjct: 130 ALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRGVIELEANHTLCKEGQHI 188
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 49.2 bits (112), Expect = 8e-05
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +1
Query: 58 KMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNT 237
K G E KA F + Q LD + +I N+ + +++IR +G S + MGK
Sbjct: 17 KKGHEGKAA----LFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTK 71
Query: 238 MMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP-ARPGAI 408
+M KA+ E A + KL + G VG +FT +V E+ VQ AR GA+
Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAV 130
Query: 409 APLSVVIPA 435
AP + VIPA
Sbjct: 131 APFTHVIPA 139
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -2
Query: 473 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM* 300
++ +F R PVL G T A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 299 GSSFSRAGF 273
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 41.1 bits (92), Expect = 0.020
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Frame = +1
Query: 67 REDKATW--KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 240
R DK T K+N K+ EYP +I+G ++ + ++++R +G S + GK +
Sbjct: 14 RTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKG-SKIFFGKLKV 72
Query: 241 MRKAI--KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 414
+ A+ + E + + + G+VG +FT +V D + + AR G+ A
Sbjct: 73 LALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQRVDFARGGSKAT 132
Query: 415 LSVVIPAH--NTGLGPEKT------SFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 570
++ +P P T + L +PT++ +G ++ + + K G + ++
Sbjct: 133 ETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNYVVCKEGQTLTSN 192
Query: 571 *SYSSQHV 594
+ +H+
Sbjct: 193 QAQILKHI 200
>UniRef50_UPI000150A24A Cluster: hypothetical protein
TTHERM_00500880; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00500880 - Tetrahymena
thermophila SB210
Length = 415
Score = 34.3 bits (75), Expect = 2.3
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -1
Query: 195 NTDLLHLLRAYIVRTHYETFWVFVQQ---LDDFNEVIGLPGSLVLPTHLGLSEVGTSEKF 25
N DLL LL AY + H+E ++ + Q LDD N+V L T L ++EV S+ F
Sbjct: 327 NLDLLILLFAYPTKEHFERKFISLSQKNRLDDLNQV-----KQHLCTSLKVTEVDYSKNF 381
Query: 24 KDKTNTH 4
+ N H
Sbjct: 382 NNYKNYH 388
>UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protein;
n=1; Blastopirellula marina DSM 3645|Rep: Protein
disulfide-isomerase-like protein - Blastopirellula
marina DSM 3645
Length = 717
Score = 33.9 bits (74), Expect = 3.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 493 WGWKEPGRKKSSQDQGQCYERE*RQTMEQW-LQDEPGLGLCSPT 365
W W+ P ++Q Q +ER + +E W Q +P LG SP+
Sbjct: 422 WSWRLPDSASAAQKQALTHERRRQALLESWTAQPQPSLGGKSPS 465
>UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Rep:
AER172Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1268
Score = 33.9 bits (74), Expect = 3.0
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -1
Query: 534 DIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFIT 355
DI++NFN N D ++L +R L ++ + R++S+ + G+D +++
Sbjct: 268 DIVENFNKIYHNFENDKETLLKRLKLEENDKLLEYDKKRKYSDKANEEAGIDSIIEDSEP 327
Query: 354 HINKISTGEDKANISLDV 301
+ K ++L V
Sbjct: 328 DVKKSRNSISSLPVNLGV 345
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 33.1 bits (72), Expect = 5.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 115 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGH--SIVLMGKNTMMRKAIKDH 264
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQH 217
>UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7271,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 145
Score = 32.7 bits (71), Expect = 7.0
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 311 EMLALS-SPVEILLMCVINCWRTKSKPR 391
+ LAL+ +PV++LL CV+ CW T S+PR
Sbjct: 74 QALALALAPVQLLLACVLTCW-TGSRPR 100
>UniRef50_UPI00005874CE Cluster: PREDICTED: similar to
OTTHUMP00000029908; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to OTTHUMP00000029908
- Strongylocentrotus purpuratus
Length = 379
Score = 32.3 bits (70), Expect = 9.3
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1
Query: 232 NTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 411
N M+K I+ H+E N ALE ++ +K +V + T + DVR ++ + + +
Sbjct: 307 NITMKKEIEGHIEENEALETIIQQLKEDVKSMST-DPISDVRKQMFPHLYKEVQKCTPDM 365
Query: 412 PLSVVIPAHN 441
+ + IP H+
Sbjct: 366 DVELDIPRHD 375
>UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1803
Score = 32.3 bits (70), Expect = 9.3
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -1
Query: 459 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 280
L+ KA + N R S + T+ +F+ + F TH +N S ++F+E
Sbjct: 100 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFPTHRTN-GLKRQISNFSAKENEKFYEC 157
Query: 279 WICFKMVLDGFPHHG 235
W + ++ FPHHG
Sbjct: 158 WERYMEAINAFPHHG 172
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,127,477
Number of Sequences: 1657284
Number of extensions: 14613122
Number of successful extensions: 42863
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 41233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42816
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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