Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F01
(573 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 1.5
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 27 1.5
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 27 2.6
SPAC9.02c |||N-acetyltransferase|Schizosaccharomyces pombe|chr 1... 26 4.5
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 6.0
SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 25 6.0
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 25 7.9
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 25 7.9
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 25 7.9
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 7.9
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 402 NFNETWSSDCEVY---RQRCLCLDHSELCR-GAQYHHVQIEYYGNLQGNAGVQRERNVRL 569
+F TW+ + + Y C S+ R G + HH+ ++Y+ L G++ +E ++
Sbjct: 885 DFGSTWT-EWQTYDGNNTYCNLSGWSQSSRYGWKGHHIMVQYWSELTGSSNYMQESDLEY 943
Query: 570 P 572
P
Sbjct: 944 P 944
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 415 VSLKFVHTLRLESVSYGHSLMQLQIAS 335
VS +F H LRL+ V+ H + +IAS
Sbjct: 291 VSTRFSHELRLKPVAVAHGIKNSEIAS 317
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -1
Query: 243 VTHSGSRRHELSQP-PGIVSRPGSPPCRSRGAPTRRCP 133
++ S S H SQ PG S P P + G ++CP
Sbjct: 66 ISSSSSEPHHTSQSTPGETSSPVCPVSGAHGGADKKCP 103
>SPAC9.02c |||N-acetyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 165
Score = 25.8 bits (54), Expect = 4.5
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = +3
Query: 135 DISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMKVHCSAGRV 314
+I E E L+ F EAERA + I + + AP+ ++ L P G V
Sbjct: 3 NIRNIERSEVEEVSKLEAICFPEAERASFARIKDRVKRAPEIQLGLFAPTQHTSTLIGHV 62
Query: 315 CEINEHGEAI 344
E +
Sbjct: 63 LTSRTGSETV 72
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.4 bits (53), Expect = 6.0
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 297 CSAGRVCEINEHGEAICNCIKEC 365
C+A R+C++ E C+ +C
Sbjct: 974 CTASRICKVREIASLSLTCLLDC 996
>SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 267 NLDDPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 413
NL K++ G + + HG I CIK+ + + K T FNE
Sbjct: 105 NLHKGAAKIYSMGGVIAAVC-HGPVILPCIKDSTGFSIVKGKTVTAFNE 152
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3
Query: 280 GSSRLISLSGASRDSFRISETRALSAS 200
G+ +L +SRD+FR ++T+A S+S
Sbjct: 47 GNKKLKESQFSSRDNFRTTQTQASSSS 73
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 298 AAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTSTRPG 420
++P+ + STST S+ S + T+PT G Q + G
Sbjct: 464 SSPSGTNSSTSTSSTSSKHSTGISTEPTTGEENKQDGSVGG 504
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 25.0 bits (52), Expect = 7.9
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +3
Query: 114 SAGLPRGDISESEHLEN-GMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMK 290
S G IS E +N G+ E D E++ + E + P LDD +
Sbjct: 12 SNGFSEEYISHPERNDNQGIVEITDLVFSSESKLTQRKESRDSKTFVPSFLEELDDDHLH 71
Query: 291 VHCSAGRVCEINEHGEAICNCIKEC 365
+ G + +N GE + +++C
Sbjct: 72 ELVTNGGILYMNSLGEGVSGSVRKC 96
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.0 bits (52), Expect = 7.9
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 399 TNFNETWSSDCEVYRQRCLCLDHSELC----RGAQYHHVQIEYYGNLQGNA 539
T+F WS D E Y + S +G + HH+ ++Y+ +L G+A
Sbjct: 884 TDFQSHWS-DWEEYNGGLTKVQASNWTGTRRQGWEGHHIHVQYWSDLGGSA 933
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,052,292
Number of Sequences: 5004
Number of extensions: 39679
Number of successful extensions: 123
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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