Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_F01
(573 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53970.1 68416.m05963 proteasome inhibitor-related similar to... 32 0.24
At3g56600.1 68416.m06294 phosphatidylinositol 3- and 4-kinase fa... 31 0.55
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 30 1.3
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ... 30 1.3
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ... 30 1.3
At5g01950.1 68418.m00114 leucine-rich repeat transmembrane prote... 29 2.9
At3g26720.1 68416.m03341 glycosyl hydrolase family 38 protein si... 29 2.9
At5g13000.1 68418.m01490 glycosyl transferase family 48 protein ... 28 3.8
At1g64140.1 68414.m07266 expressed protein similar to putative d... 28 3.8
At1g15190.1 68414.m01816 hypothetical protein 28 3.8
At5g09670.2 68418.m01119 loricrin-related contains weak similari... 27 6.7
At5g09670.1 68418.m01118 loricrin-related contains weak similari... 27 6.7
At3g15820.1 68416.m02002 phosphatidic acid phosphatase-related /... 27 6.7
At2g32660.1 68415.m03992 disease resistance family protein / LRR... 27 6.7
At1g11340.1 68414.m01302 S-locus lectin protein kinase family pr... 27 6.7
At5g64550.1 68418.m08112 loricrin-related contains weak similari... 27 8.9
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 27 8.9
>At3g53970.1 68416.m05963 proteasome inhibitor-related similar to
proteasome inhibitor PI31 subunit (hPI31) SP:Q92530 from
[Homo sapiens]
Length = 302
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +2
Query: 56 PKTSSTPSALTYDDYGAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG 205
P P +D YG V G P G PR GG P E PGG
Sbjct: 250 PHPGMPPPGARFDPYGPPGVPGFEP-GRFTRQPPRGPGGGHPDLEHFPGG 298
>At3g56600.1 68416.m06294 phosphatidylinositol 3- and 4-kinase
family protein low similarity to 55 kDa type II
phosphatidylinositol 4-kinase [Rattus norvegicus]
GI:13660755; contains Pfam profile PF00454:
Phosphatidylinositol 3- and 4-kinase
Length = 533
Score = 31.1 bits (67), Expect = 0.55
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 472 SEWSRQRQRCRYTSQSDDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLIS 317
S++SR QRCR S ++ + +T + + HSL +++PC IS
Sbjct: 13 SQFSRSSQRCRLQSLTNLDFNFLGFNTKQTNLSASSHSLNNRSVSTPCFSIS 64
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 101 GAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG*E-SSCLRDPE*VTRCS 253
G +GG P G G P GG PG +PGG + S L DPE +T S
Sbjct: 349 GMPGMGGGMPAGMGGGGMPGAG-GGMPGGGGMPGGMDFSKILNDPELMTAFS 399
>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 791
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 237 ESRDAPDNEINLDDPC-MKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 413
+ DA ++ + + C K C GR CEI C C+ +C R C
Sbjct: 240 DPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQ----CTCVNQCSGHGKCRGGFCQCDKG 295
Query: 414 TWSSDCEVYRQRCLCLDHSELCRGAQYHHVQIEYYGNLQGN 536
+ +DC + + + R A H+++ N+ GN
Sbjct: 296 WFGTDCSIPSTLSTVGEWPQWLRPA---HLEVPSEKNVPGN 333
>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 793
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 237 ESRDAPDNEINLDDPC-MKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 413
+ DA ++ + + C K C GR CEI C C+ +C R C
Sbjct: 242 DPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQ----CTCVNQCSGHGKCRGGFCQCDKG 297
Query: 414 TWSSDCEVYRQRCLCLDHSELCRGAQYHHVQIEYYGNLQGN 536
+ +DC + + + R A H+++ N+ GN
Sbjct: 298 WFGTDCSIPSTLSTVGEWPQWLRPA---HLEVPSEKNVPGN 335
>At5g01950.1 68418.m00114 leucine-rich repeat transmembrane protein
kinase, putative receptor protein kinases
Length = 1032
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 277 SSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSR 155
S R SL GA D +I + L SWN L+ + + FS+
Sbjct: 334 SLRNCSLKGALPDFSKIRHLKYLDLSWNELTGPIPSSNFSK 374
>At3g26720.1 68416.m03341 glycosyl hydrolase family 38 protein
similar to lysosomal alpha-mannosidase GI:3522867 from
[Homo sapiens]
Length = 1019
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 156 LENGMAESLDERRFQEAERARVSEILNESRDAPD 257
LENG E + RR Q + V EILNE+ P+
Sbjct: 794 LENGQIELMLHRRMQHDDIRGVGEILNETVCLPE 827
>At5g13000.1 68418.m01490 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1889
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 492 YHHVQIEYYGNLQGNAGVQRERNVR 566
YHH+ E YG L GN NV+
Sbjct: 362 YHHMAFELYGMLAGNVSPMTGENVK 386
>At1g64140.1 68414.m07266 expressed protein similar to putative
disease resistance protein GB:CAB40943 GI:4586107 from
[Arabidopsis thaliana]; weak similarity to Loricrin
(Swiss-Prot:P23490) [Homo sapiens]
Length = 646
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -1
Query: 321 SHRHGRRCSALSCTD--RQD*FHCQEH----RVTHSGSRRHELSQPPGIVSRPGSPPCRS 160
SH GRRC + CT + C+ H R THSG + P G C
Sbjct: 377 SHGGGRRCQSNGCTKGAQGSTMFCKAHGGGKRCTHSGCTKGAEGSTPFCKGHGGGKRCAF 436
Query: 159 RG 154
+G
Sbjct: 437 QG 438
>At1g15190.1 68414.m01816 hypothetical protein
Length = 248
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -3
Query: 286 MHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSRCSDSEMSPRGSPA 116
+HG + L+ L+ S + + ++ AL+ S L SR S P + ++SP SP+
Sbjct: 159 VHGLADLLPLTAPSSPNRLVEDSTALAKSPWFLGSRFSPAPEPYFAFMDLSPAESPS 215
>At5g09670.2 68418.m01119 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 546
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 321 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTR 142
+H G+RC L CT + + ++H G RR E + +R S C G +
Sbjct: 199 THGGGKRCEHLGCTKSAE--GKTDFCISHGGGRRCEFLEGCDKAARGRSGLCIKHGG-GK 255
Query: 141 RC 136
RC
Sbjct: 256 RC 257
>At5g09670.1 68418.m01118 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 546
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 321 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTR 142
+H G+RC L CT + + ++H G RR E + +R S C G +
Sbjct: 199 THGGGKRCEHLGCTKSAE--GKTDFCISHGGGRRCEFLEGCDKAARGRSGLCIKHGG-GK 255
Query: 141 RC 136
RC
Sbjct: 256 RC 257
>At3g15820.1 68416.m02002 phosphatidic acid phosphatase-related /
PAP2-related contains Pfam profile PF01569: PAP2
superfamily
Length = 301
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 147 SEHLENGMAESLDERRFQEAERARVSEILN 236
S H+ M SLD RR Q A V +ILN
Sbjct: 214 SGHVAGSMIASLDMRRMQRLRLAMVFDILN 243
>At2g32660.1 68415.m03992 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4
[Lycopersicon hirsutum] gi|2808683|emb|CAA05268
Length = 589
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 56 PKTSSTPSALTYDDYGAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG*ESSCLRD 229
P+ S L Y D + G P+G +G P+ G G +P E SCLR+
Sbjct: 472 PQELGRLSYLAYIDVSDNQLTGKIPQGTQIIGQPKSSFEGNSGLCGLP--LEESCLRE 527
>At1g11340.1 68414.m01302 S-locus lectin protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains S-locus glycoprotein family domain,
Pfam:PF00954
Length = 901
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -3
Query: 568 SLTFRSRCTPAFPCKFP*YSICTWWYCAPRHSSEWSRQRQRCRYTSQSDDQVSLK 404
S TF C P F KFP + W+ R SS +++R S+ D V LK
Sbjct: 369 SKTFECTCLPGFEPKFPRH-----WFL--RDSSGGCTKKKRASICSEKDGFVKLK 416
>At5g64550.1 68418.m08112 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 634
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +3
Query: 267 NLDDPCMKVHC---SAGRVCEINEHGEAICNCIKECP 368
N D + + C SAGR+ + H +C+ + CP
Sbjct: 21 NFGDTALSLKCLGSSAGRLIGSSHHNHKLCSDVSNCP 57
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 120 GLPRGDISESEHLENG----MAESLDERRFQEAERARVSEIL-NESRDAPDNEINLD 275
G ISESE LENG ++ D+ + Q+ +R + +L N D P+ E N D
Sbjct: 1100 GKENNSISESEALENGENSQESDEKDKGQQQQVLASRGAMLLQNALADKPEEETNDD 1156
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,364,676
Number of Sequences: 28952
Number of extensions: 236745
Number of successful extensions: 895
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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