Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_E24
(537 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0537 + 3860277-3860286,3860464-3860576,3861729-3861799,386... 150 6e-37
06_01_0527 + 3822051-3822318,3822408-3822520,3823673-3823743,382... 150 6e-37
03_03_0129 - 14684003-14684123,14684205-14684323,14684406-146845... 138 3e-33
10_07_0106 - 12933918-12934041,12934164-12934486,12934584-129349... 130 7e-31
10_07_0109 + 12952293-12952952,12953049-12953402,12953494-129538... 126 1e-29
10_07_0105 + 12922828-12923448,12923554-12923907,12924008-129243... 101 3e-25
06_01_0963 + 7411944-7412396,7412677-7412736,7412828-7413010,741... 110 6e-25
10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397 68 5e-12
07_03_1157 - 24419157-24419948 29 1.8
05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,375... 29 1.8
06_01_1079 + 8832779-8833960 29 2.3
11_01_0804 - 7137525-7137824,7138207-7139043 28 4.1
04_04_0272 - 24073753-24074802 28 5.4
01_07_0246 + 42253379-42253642,42253846-42254084,42254267-422544... 28 5.4
11_06_0166 + 20851451-20854000 27 7.2
>06_01_0537 +
3860277-3860286,3860464-3860576,3861729-3861799,
3861887-3861978,3862080-3862167,3862264-3862375,
3862503-3862599,3862710-3862791,3863153-3863273,
3863459-3863566,3863717-3863819,3863996-3864171
Length = 390
Score = 150 bits (364), Expect = 6e-37
Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
Frame = +1
Query: 1 YMNGHSDVIMGA-AIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKK 177
++ GHSD++ G A+ + +A ++ FLQNA G +P DC+L R +KT+A+R+E+ +
Sbjct: 204 FIAGHSDLMAGILAVKGESSLAKEIAFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQA 263
Query: 178 SSLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSS 357
++ IA +L HP+VK V + GLP HP + Q G V SF+ G L S + +
Sbjct: 264 NAQKIAEFLASHPRVKKVNYAGLPDHPGRSLHYSQAKGAGSVLSFL-TGSLALSKHVVET 322
Query: 358 LKIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDTEDLIADLE 537
K F + S G +SL LP M+HAS+P+ R + G+TD LVR+SVG+ED +DLIADL+
Sbjct: 323 TKYFNVTVSFGSVKSLISLPCFMSHASIPSAVREERGLTDDLVRISVGIEDADDLIADLD 382
>06_01_0527 +
3822051-3822318,3822408-3822520,3823673-3823743,
3823831-3823922,3824024-3824111,3824208-3824319,
3824447-3824543,3824654-3824735,3825097-3825217,
3825403-3825510,3825661-3825763,3825940-3826115
Length = 476
Score = 150 bits (364), Expect = 6e-37
Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
Frame = +1
Query: 1 YMNGHSDVIMGA-AIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKK 177
++ GHSD++ G A+ + +A ++ FLQNA G +P DC+L R +KT+A+R+E+ +
Sbjct: 290 FIAGHSDLMAGILAVKGESSLAKEIAFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQA 349
Query: 178 SSLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSS 357
++ IA +L HP+VK V + GLP HP + Q G V SF+ G L S + +
Sbjct: 350 NAQKIAEFLASHPRVKKVNYAGLPDHPGRSLHYSQAKGAGSVLSFL-TGSLALSKHVVET 408
Query: 358 LKIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDTEDLIADLE 537
K F + S G +SL LP M+HAS+P+ R + G+TD LVR+SVG+ED +DLIADL+
Sbjct: 409 TKYFNVTVSFGSVKSLISLPCFMSHASIPSAVREERGLTDDLVRISVGIEDADDLIADLD 468
>03_03_0129 -
14684003-14684123,14684205-14684323,14684406-14684501,
14684605-14684712,14684974-14685060,14685135-14685338,
14685429-14685488,14686096-14686264,14686400-14686473,
14686586-14686897,14687054-14687212
Length = 502
Score = 138 bits (334), Expect = 3e-33
Identities = 71/178 (39%), Positives = 110/178 (61%)
Frame = +1
Query: 1 YMNGHSDVIMGAAIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKKS 180
Y+ GH+DVI G D +++ K+R + +G V +P YL+ R +KTL +R++ +
Sbjct: 320 YIAGHNDVIGGCISGRDELVS-KVRIYHHVVGGVLNPNAAYLILRGMKTLHLRVQCQNNT 378
Query: 181 SLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSSL 360
++ +A +L +HPK+ V +PGLPSHP+H I K Q +G GV SF G + +F+ S+
Sbjct: 379 AMRMAQFLEEHPKIARVYYPGLPSHPEHHIAKSQMTGFGGVISFEVAGDFDATRRFIDSV 438
Query: 361 KIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDTEDLIADL 534
KI A S GG ES+ + P++M++ EQR GI D+L+R S+G+ED EDL D+
Sbjct: 439 KIPYHAPSFGGCESIIDQPAIMSYWD-SKEQREIYGIKDNLIRFSIGVEDFEDLKNDV 495
>10_07_0106 -
12933918-12934041,12934164-12934486,12934584-12934937,
12935029-12935646
Length = 472
Score = 130 bits (314), Expect = 7e-31
Identities = 68/178 (38%), Positives = 109/178 (61%)
Frame = +1
Query: 1 YMNGHSDVIMGAAIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKKS 180
Y+ GH DVI G ++ +I+ ++R + +G SP Y++ R LKTLA+R+E ++
Sbjct: 289 YIAGHHDVIAGCVSGSEALIS-RIRAWHHDLGGAISPNAAYMIIRGLKTLALRVEAQNRT 347
Query: 181 SLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSSL 360
+L +A L KHPK++ V +PGL S P H + +Q +G GV SF ++ +F+ +L
Sbjct: 348 ALRMARLLEKHPKIERVYYPGLESSPWHGVATRQMAGAGGVVSFEVASDMRGVMRFVDAL 407
Query: 361 KIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDTEDLIADL 534
++ +A SLGG ESL + P+VM++ E++A+ GI D+ VR S G+E EDL D+
Sbjct: 408 ELPLIATSLGGCESLVQQPAVMSYWGKSEEEKAKNGIKDNFVRFSFGIEKFEDLRDDI 465
>10_07_0109 +
12952293-12952952,12953049-12953402,12953494-12953816,
12953939-12954062
Length = 486
Score = 126 bits (303), Expect = 1e-29
Identities = 67/178 (37%), Positives = 108/178 (60%)
Frame = +1
Query: 1 YMNGHSDVIMGAAIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKKS 180
Y+ GH DVI G ++ +I+ ++R + +G SP Y++ R LKT+A+R+E ++
Sbjct: 303 YIAGHHDVIAGCVSGSEALIS-RIRAWHHDLGGAISPNAAYMIIRGLKTIALRVEAQNRT 361
Query: 181 SLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSSL 360
+L +A L KHPK++ V +PGL S H + +Q +G GV SF L+ +F+ +L
Sbjct: 362 ALRMARLLEKHPKIERVYYPGLESSLWHGVATRQMAGAGGVVSFDVASDLRGVMRFVDAL 421
Query: 361 KIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDTEDLIADL 534
++ +A SLGG ESL + P+VM++ E++A+ GI D+ VR S G+E EDL D+
Sbjct: 422 ELPLIATSLGGCESLVQQPAVMSYWGKSEEEKAKNGIKDNFVRFSFGIEKFEDLRDDI 479
>10_07_0105 +
12922828-12923448,12923554-12923907,12924008-12924330,
12928324-12928401,12928760-12928883
Length = 499
Score = 101 bits (242), Expect(2) = 3e-25
Identities = 49/144 (34%), Positives = 88/144 (61%)
Frame = +1
Query: 1 YMNGHSDVIMGAAIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKKS 180
Y+ GH DVI G ++ +++ ++R + +G SP Y++ R LKTLA+R++ ++
Sbjct: 290 YIAGHHDVIAGCVSGSEALVS-RIRTWHHDLGGAISPNAAYMIIRGLKTLALRVQAQNRT 348
Query: 181 SLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSSL 360
+L +A L KHPK++ V +PGL S P H + +Q +G GV ++ + +F+ +L
Sbjct: 349 ALRMAQLLEKHPKIERVYYPGLESSPWHGVATRQMAGAGGVVGLEVASDMRGAMRFVDAL 408
Query: 361 KIFTLAESLGGYESLAELPSVMTH 432
++ +A SLGG ESL + P++M++
Sbjct: 409 ELPLIATSLGGCESLVQQPAIMSY 432
Score = 31.1 bits (67), Expect(2) = 3e-25
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 448 EQRAQLGITDSLVRLSVGLEDTEDLIADL 534
E++A+ GI D+ VR S G+E EDL D+
Sbjct: 464 EEKAKNGIKDNFVRFSFGIEKFEDLRDDI 492
>06_01_0963 +
7411944-7412396,7412677-7412736,7412828-7413010,
7413259-7413339,7414219-7414541,7414961-7415084
Length = 407
Score = 110 bits (265), Expect = 6e-25
Identities = 54/142 (38%), Positives = 89/142 (62%)
Frame = +1
Query: 109 PMDCYLVNRSLKTLAIRMEQHKKSSLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTS 288
P Y++ R LKT+A+R+E +++L +A L +HPKV+ V +P L S P H + +KQ +
Sbjct: 259 PNAAYMIIRGLKTMALRVEAQNRTALRVARLLERHPKVERVNYPWLESSPWHGVARKQMT 318
Query: 289 GHSGVFSFVHVGGLKESNKFLSSLKIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLG 468
G GV SF ++ + +F+ +L++ +A SLGG ESL + P++M++ ++ + G
Sbjct: 319 GAGGVISFEVASDMRGAMRFVDALELPFIATSLGGCESLVQQPAIMSYWGKSEAEKTENG 378
Query: 469 ITDSLVRLSVGLEDTEDLIADL 534
I D+LVR S G+E EDL D+
Sbjct: 379 IKDNLVRFSFGIEKFEDLKDDI 400
>10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397
Length = 469
Score = 67.7 bits (158), Expect = 5e-12
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Frame = +1
Query: 1 YMNGHSDVIMGAAIVNDGVIAAKLRFLQNAMGIVPSPMDC---YLVNRSLKTLAIRMEQH 171
+++G +D+I GA ++ A + + A+ ++ M+ + ++ L L +RM++H
Sbjct: 253 FISGGADIIAGAICGPASLVNAMMDLQEGALMLLGPTMNAKVAFELSERLPHLPLRMQEH 312
Query: 172 KKSSLIIANWLLKHPKVKDVLHPGLPSHPQH-EITKKQTSGH-SGVFSFVHVGGLKESNK 345
+ + A+ ++ ++ V +PGLP HP H + G+ +G V +G +N+
Sbjct: 313 SRRAAEYAS-RMRRLGLR-VAYPGLPDHPHHARLLAIANPGYGAGGMLCVDMGTEDRANR 370
Query: 346 FLSSLKIFT----LAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDT 513
+ L+ T +A SLG YE+L T + +P E RA+ GI+ LVR+SVG T
Sbjct: 371 LMHHLQNTTRFGLMAVSLGYYETLMSCSGSSTSSEMPPEDRARAGISPGLVRMSVGYNGT 430
>07_03_1157 - 24419157-24419948
Length = 263
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 205 LKHPKVKDVLHPGLPSHPQHE 267
L HP V ++ HP +P P+HE
Sbjct: 146 LPHPAVPEIPHPAVPELPKHE 166
>05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,
3753249-3753310,3753398-3753584,3753692-3753826,
3753872-3753948,3754005-3754076,3754389-3754588,
3754675-3755020,3755463-3755519,3755655-3757433,
3757539-3757720,3757943-3758072
Length = 1111
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 319 VGGLKESNKFLSSLKIFTL--AESLGGYESLAELPSVMTHASVPAEQR 456
+GGL+ S KF+ S++++ + S+ G+ S+ S T A V A R
Sbjct: 1043 IGGLQSSEKFMDSVEVYNVKCGWSVPGFSSIGVRVSQTTGAGVTAPWR 1090
>06_01_1079 + 8832779-8833960
Length = 393
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 49 DGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKKSSLII----ANWLLKHP 216
D + A LR +N IV + + L+ +T +R+ Q + +L + ANWL K+P
Sbjct: 9 DPALEAALR--RNRRWIVNNQIKRLLLRFPSRTAPVRLLQSRFKTLDLLGRAANWLRKYP 66
Query: 217 KVKDVLHPG 243
D+ H G
Sbjct: 67 SCFDLFHGG 75
>11_01_0804 - 7137525-7137824,7138207-7139043
Length = 378
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 352 SSLKIFTLAESLGGYESLAELPSVMTHASVPAEQR 456
+ L I T LGG E+ A LP +M S+PA ++
Sbjct: 40 AKLGIPTAIHRLGGEEAAASLPDLMAALSLPASKQ 74
>04_04_0272 - 24073753-24074802
Length = 349
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 346 FLSSLKIFTLAESLGGYESLAELPSVMTHASVPAEQRAQ 462
+L+ K+ LA G ++ LP+ + AS+P +RAQ
Sbjct: 70 WLAEFKLLLLASGHGPLDTSLPLPAFVAIASLPVRRRAQ 108
>01_07_0246 +
42253379-42253642,42253846-42254084,42254267-42254471,
42254719-42254787,42254869-42255055,42255760-42255926,
42256350-42257045
Length = 608
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 7 NGHSDVIMGAAIVNDGVIAA---KLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKK 177
NGHSD+ + + D + A +LRF+++ +P++ Y N L + R K
Sbjct: 220 NGHSDISLADSYAKDNKVEAREQRLRFVES------NPLNSYSSNEELVMMPKRRGGRDK 273
Query: 178 SSLIIANWL 204
+ + WL
Sbjct: 274 DIISHSEWL 282
>11_06_0166 + 20851451-20854000
Length = 849
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +1
Query: 334 ESNKFLSSLKIFTLAESLGGYESLAELPSVMTHASVPAEQR------AQLGITDSLVRLS 495
+ + + + + +F +A ++ ELP +TH +VP R A +TD LV S
Sbjct: 702 DEHAWAACMSVFKIAPAIAANLPTKELPQFVTHVAVPLAARGVVAHSAYAAVTDLLVESS 761
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,660,264
Number of Sequences: 37544
Number of extensions: 256764
Number of successful extensions: 774
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -