Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E24
         (537 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   0.70 
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         25   1.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   3.7  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   4.9  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 525  NKIFGVF*SYGKSDEGVCDTELSPLL 448
            +K+F  F SY   DE     EL+P+L
Sbjct: 1081 DKLFDAFISYSSKDEAFVAEELAPML 1106


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 158 LIAKVFKLLLTK*QSIGDGTMPIAFCKNLS 69
           + +++F+ LLTK    G GT+ +  C ++S
Sbjct: 38  VFSRIFRRLLTKPYLSGSGTLCVCVCVDVS 67


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 248 RLILNMRSRRNKRVDILVCSV 310
           + ++N +S +NKRV  L CSV
Sbjct: 114 KYLINGKSVQNKRVQDLFCSV 134


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 394 YESLAELPSVMTHASVPAEQRAQLGIT 474
           Y+SLAE  S M  + +PA +   L  T
Sbjct: 385 YKSLAEAASKMARSFIPAREPEDLHTT 411


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,951
Number of Sequences: 2352
Number of extensions: 10499
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)