Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E24
         (537 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical p...   235   1e-62
Z83106-5|CAB05492.1|  392|Caenorhabditis elegans Hypothetical pr...   231   2e-61
Z81467-4|CAB03873.2|  451|Caenorhabditis elegans Hypothetical pr...   124   3e-29

>U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical
           protein ZK1127.10 protein.
          Length = 392

 Score =  235 bits (576), Expect = 1e-62
 Identities = 110/179 (61%), Positives = 141/179 (78%)
 Frame = +1

Query: 1   YMNGHSDVIMGAAIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKKS 180
           Y+NGHSDV+MGA I ++      L F+Q A+G VPSP DC+LVNR LKTL IRM  H ++
Sbjct: 204 YINGHSDVVMGAVITDNDEFQQHLFFMQLAVGAVPSPFDCFLVNRGLKTLHIRMRAHYEN 263

Query: 181 SLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSSL 360
           +L +A +L  + +++ VL+P LPSHPQHE+ +KQT G SG+ SF   G L+ES  FLS+L
Sbjct: 264 ALAVAKYLEANDRIESVLYPALPSHPQHEVHEKQTKGMSGMISFYLKGELQESRAFLSAL 323

Query: 361 KIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDTEDLIADLE 537
           K+FTLAESLGGYESLAELPS+MTHASVPAE R  LGITD+L+R+SVG+ED +DL+ADL+
Sbjct: 324 KVFTLAESLGGYESLAELPSIMTHASVPAETRIVLGITDNLIRISVGIEDLDDLVADLD 382


>Z83106-5|CAB05492.1|  392|Caenorhabditis elegans Hypothetical
           protein F22B8.6 protein.
          Length = 392

 Score =  231 bits (565), Expect = 2e-61
 Identities = 110/179 (61%), Positives = 139/179 (77%)
 Frame = +1

Query: 1   YMNGHSDVIMGAAIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKKS 180
           Y+NGHSD+IMGAAI N+      L F+Q A+G VPSP DC+LVNR LKTL +RM+ H ++
Sbjct: 204 YINGHSDIIMGAAITNNDEFQQHLHFMQRAIGGVPSPFDCFLVNRGLKTLHVRMKAHFEN 263

Query: 181 SLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSSL 360
           +L IA +L  H  ++ VL+P LPSHPQH +  KQT G SG+ SF   G L +S  FLS+L
Sbjct: 264 ALAIAKFLEAHDCIESVLYPALPSHPQHTVHVKQTKGMSGMISFYLKGELCQSRAFLSAL 323

Query: 361 KIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDTEDLIADLE 537
           K+FTLAESLGG ESLAELPS+MTHASVP+  RA+LGITD+L+R+SVG+ED +DLIADL+
Sbjct: 324 KVFTLAESLGGCESLAELPSIMTHASVPSATRAELGITDNLIRISVGIEDLDDLIADLD 382


>Z81467-4|CAB03873.2|  451|Caenorhabditis elegans Hypothetical
           protein C12C8.2a protein.
          Length = 451

 Score =  124 bits (300), Expect = 3e-29
 Identities = 70/178 (39%), Positives = 100/178 (56%)
 Frame = +1

Query: 1   YMNGHSDVIMGAAIVNDGVIAAKLRFLQNAMGIVPSPMDCYLVNRSLKTLAIRMEQHKKS 180
           Y+ GH+DVI G   V+      KL+  Q   G   SP D  L+ R LKTL +R+++  ++
Sbjct: 268 YIGGHTDVIAGVVTVSSYDNWKKLKLQQLTTGSSLSPYDAALLTRGLKTLGLRVDRISEN 327

Query: 181 SLIIANWLLKHPKVKDVLHPGLPSHPQHEITKKQTSGHSGVFSFVHVGGLKESNKFLSSL 360
           +   A +L  HPKV+ V +PGLPSHPQH+  K+     +G+ +F  VG  + + K + SL
Sbjct: 328 AQKTAEFLESHPKVERVFYPGLPSHPQHQYAKQVMKQFAGMIAF-DVGTAENAIKLVESL 386

Query: 361 KIFTLAESLGGYESLAELPSVMTHASVPAEQRAQLGITDSLVRLSVGLEDTEDLIADL 534
           K+   A SLGG ESL E P  M+H            +   L+R SVG+E+ ED+I DL
Sbjct: 387 KLIIHAVSLGGTESLIEHPLSMSHGKHLLRYLDGPTVAPGLLRFSVGIENVEDIIGDL 444


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,773,684
Number of Sequences: 27780
Number of extensions: 229051
Number of successful extensions: 566
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)