Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E21
         (125 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   2.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    18   8.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    18   8.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    18   8.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    18   8.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    18   8.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 110 NWPSITTGLGSDILTLLLFAVNK 42
           NW   T G+G+ +L  + F   K
Sbjct: 154 NWERHTKGIGAKLLLQMGFQPGK 176


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 3   NVPDFDKSDSCNHLVNGKQ 59
           ++P     DSC+++  G+Q
Sbjct: 374 SLPGCHMVDSCSNIQTGEQ 392


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 3   NVPDFDKSDSCNHLVNGKQ 59
           ++P     DSC+++  G+Q
Sbjct: 381 SLPGCHMVDSCSNIQTGEQ 399


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +3

Query: 27  DSCNHLV 47
           D+CNHL+
Sbjct: 204 DNCNHLM 210


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 12  DFDKSDSCNHLVNGKQ**SQN 74
           D DK D  N +++     SQN
Sbjct: 330 DIDKEDERNEVISSALKLSQN 350


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -3

Query: 42  DDCRNRSCQS 13
           DDC+   CQ+
Sbjct: 224 DDCKPNPCQN 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,879
Number of Sequences: 336
Number of extensions: 324
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 22
effective length of database: 115,193
effective search space used:  2188667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)