Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E21
         (125 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   0.78 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    19   4.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    18   9.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    18   9.6  

>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.8 bits (44), Expect = 0.78
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 122 INSHNWPSITTGLGSDILTL 63
           ++SH+   I TG G  I+T+
Sbjct: 76  VSSHSSNGIHTGFGGSIITI 95


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 47  NKMIAGIALVKVW 9
           +K +AG+ +V VW
Sbjct: 152 SKRLAGLMIVAVW 164


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +3

Query: 27  DSCNHLV 47
           D+CNHL+
Sbjct: 182 DNCNHLM 188


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 124 LSTAITGPVSPRALVVTF*LYY 59
           +S  +TG +SP A+  T   Y+
Sbjct: 101 VSHPLTGDLSPAAVSYTSGFYH 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,247
Number of Sequences: 438
Number of extensions: 380
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 22
effective length of database: 136,707
effective search space used:  2597433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)