Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_E20
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_1017 + 21747044-21748051 40 0.002
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 38 0.008
03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906 36 0.025
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 36 0.033
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 33 0.17
08_01_1010 - 10215625-10216335,10216372-10216473 32 0.40
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 31 0.70
07_03_0380 + 17460078-17460782,17461194-17461252,17461388-174614... 30 1.2
12_02_0216 + 15804110-15804284,15804341-15804351 30 1.6
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 29 2.2
06_02_0109 - 11919279-11920109 29 2.8
09_06_0343 - 22415525-22415833,22415999-22416134,22416593-224166... 28 5.0
03_05_0517 - 25118232-25118730,25119002-25119273 28 5.0
03_02_0269 + 7001891-7002212,7003598-7004037 28 5.0
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 6.6
12_02_0219 + 15822050-15824896 27 8.7
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608... 27 8.7
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420... 27 8.7
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 27 8.7
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 27 8.7
>04_03_1017 + 21747044-21748051
Length = 335
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+PDY+P +PDY P +PDY+P +PDY P +PDY
Sbjct: 89 SPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAASPDY 148
Query: 279 NP-GQVHVVDNSGVPSDGNSDHVVIANPD--PFFSQPSNGPSGNYEPISTGP---AFVDF 440
P + S ++PD P S +Y P ST P A D+
Sbjct: 149 TPESPPRRAASPDYTPASPSRRAAASSPDYTPESPPRRRAASPDYSP-STPPRRAASPDY 207
Query: 441 NHPNYPPKRYDNP 479
+ P+ PP+R +P
Sbjct: 208 S-PSTPPRRAASP 219
Score = 35.9 bits (79), Expect = 0.025
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+PDY+P +PDY+P +PDY+P +PDY P +PDY
Sbjct: 190 SPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDY 249
Query: 279 NPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD-FNHPNY 455
Q+ + P D+ P P + P PS P S P+ + F P
Sbjct: 250 T--QMTPPRRAASP-----DYTPSTPPPPRAASPDYTPS--TPPSSPLPSAAESFTVP-- 298
Query: 456 PPKRY 470
PP+RY
Sbjct: 299 PPRRY 303
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Frame = -2
Query: 360 PGSQ*QRGHYCRPMEHHYCPPREPGL--DYSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQ 187
P S +R P PPR DYS RA D S RA DYS
Sbjct: 164 PASPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSP 223
Query: 186 GCDRLRAPGLDYSQGCN*LRAPGLDYNQ 103
RA DY+ RA DY Q
Sbjct: 224 STPPRRAASPDYTPMSPPRRAASPDYTQ 251
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/72 (31%), Positives = 25/72 (34%)
Frame = -2
Query: 303 PPREPGLDYSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQGCN*LRA 124
P R DYS RA D S RA DY+ RA DY+Q RA
Sbjct: 199 PRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRA 258
Query: 123 PGLDYNQGYDRP 88
DY P
Sbjct: 259 ASPDYTPSTPPP 270
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 37.5 bits (83), Expect = 0.008
Identities = 36/146 (24%), Positives = 53/146 (36%), Gaps = 15/146 (10%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+P Y+P +P Y+P +P Y+P +P Y P + +P Y
Sbjct: 1687 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSY 1746
Query: 279 NPGQV-----HVVDNSG---VPSDGNSDHVVIANP-----DPFFSQPSNGPSGNYEPIST 419
NP H S P S + +P P +SQPS S ++
Sbjct: 1747 NPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTS 1806
Query: 420 GPAFVDFN--HPNYPPKRYDNPLARG 491
G D++ PNY P +P A G
Sbjct: 1807 GGPSPDYSPTSPNYSPSGSYSPTAPG 1832
Score = 35.9 bits (79), Expect = 0.025
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+P Y+P +P Y PG +P Y+P +P Y P +P Y
Sbjct: 1568 SPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1627
Query: 279 NPGQVHVVDNSGVPSDGNSDHVVIANPDPFFS--QPSNGP-SGNYEPISTGPAFVDFNHP 449
+P S PS + V + P +S P+ P S +Y P T P++ P
Sbjct: 1628 SPTSPSYSPTS--PSYSPTS-PVYSPTSPAYSPTSPAYSPTSPSYSP--TSPSYSP-TSP 1681
Query: 450 NYPP 461
+Y P
Sbjct: 1682 SYSP 1685
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+P Y+P +P Y+P +P Y+P +P Y P +P+Y
Sbjct: 1680 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNY 1739
Query: 279 NPGQVHVVDNSGVPSDGNSDHVVIANPDPFF-SQPSNGP-SGNYEPISTGPAFVDFNHPN 452
+P +S S ++ P+ + P+ P S Y P T P++ P+
Sbjct: 1740 SPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSP--TSPSYSQ-PSPS 1796
Query: 453 YPP 461
Y P
Sbjct: 1797 YSP 1799
Score = 32.3 bits (70), Expect = 0.31
Identities = 29/121 (23%), Positives = 41/121 (33%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1666 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 1725
Query: 279 NPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYP 458
+P S P+ N +P S PS Y P S + PNY
Sbjct: 1726 SP-----TSPSYSPTSPNYSP---TSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYS 1777
Query: 459 P 461
P
Sbjct: 1778 P 1778
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/66 (24%), Positives = 24/66 (36%)
Frame = +3
Query: 87 VVDHNPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDH 266
V P Y+P +P Y+P +P Y+P +P Y P
Sbjct: 1557 VYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPT 1616
Query: 267 NPDYNP 284
+P Y+P
Sbjct: 1617 SPSYSP 1622
Score = 31.1 bits (67), Expect = 0.70
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 2/129 (1%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1638 SPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1697
Query: 279 NPGQVHVVDNSGVPS-DGNSDHVVIANPDPFFSQPSNGP-SGNYEPISTGPAFVDFNHPN 452
+P S PS S +P + PS P S NY P T P++ + +
Sbjct: 1698 SPTSPSYSPTS--PSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSP--TSPSY-NPSSAK 1752
Query: 453 YPPKRYDNP 479
Y P +P
Sbjct: 1753 YSPSHAYSP 1761
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/121 (23%), Positives = 44/121 (36%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1631 SPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1690
Query: 279 NPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYP 458
+P S S + + + P +S S G Y P T P++ PNY
Sbjct: 1691 SPTSPSYSPTSPSYSPTSPSY---SPTSPAYSPTSPG----YSP--TSPSYSP-TSPNYS 1740
Query: 459 P 461
P
Sbjct: 1741 P 1741
>03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906
Length = 190
Score = 35.9 bits (79), Expect = 0.025
Identities = 29/87 (33%), Positives = 39/87 (44%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
NP ++PG H V N D + V NP ++PG H N V NP +
Sbjct: 88 NPGHSPGIGHHVAINGDVDDDDVRPT--NPGHSPGIGHHAIVNGADDADDVRPT--NPGH 143
Query: 279 NPGQVHVVDNSGVPSDGNSDHVVIANP 359
+PG H V NS +D ++D V NP
Sbjct: 144 SPGIGHAVVNS---ADDDADDVRPTNP 167
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 35.5 bits (78), Expect = 0.033
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 278
+P Y+P +P Y+P + Y+P +P Y P +P Y
Sbjct: 1749 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSY 1808
Query: 279 NPGQV-HVVDNSGVPSDGN---SDHVVIANPDPFFSQPSNGPSGNYEPIS 416
NP V + ++ PS N S + P +SQPS PS Y P S
Sbjct: 1809 NPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPS--PS--YSPTS 1854
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Frame = +3
Query: 141 NPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDYNPGQVHVVDNSGVP 320
+P Y+P + Y+P +P Y P +P YNP + P
Sbjct: 1652 SPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSP 1711
Query: 321 SDGNSDHVVIANP-DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 461
S + +P P +S S PS NY P T P++ P+Y P
Sbjct: 1712 SYSPTSPSYSYSPTSPSYSPTS--PSYNYSP--TSPSYSP-TSPSYSP 1754
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 243 GQVHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNG 389
G V+ V + +PG +++N+G S GN ++ N PFF SNG
Sbjct: 39 GMVYDVTSYVEEHPGGDEILNNAGATSKGNYALILPVNEFPFFLVYSNG 87
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 31.9 bits (69), Expect = 0.40
Identities = 34/131 (25%), Positives = 46/131 (35%), Gaps = 4/131 (3%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDH--NPDYNPGQVHVVDH--NPDYYPGQVHVVDH 266
+PDY P +PDY P +PDY P +PDY P
Sbjct: 70 SPDYTPSTPPRRAASPDYTPSTPTTPRRAASPDYTPSTPTPPRRAASPDYTPSTPPPRAA 129
Query: 267 NPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNH 446
+PDY P P S + + P + P PS P A +D+
Sbjct: 130 SPDYTP------STPTPPRRAASPNYTPSTPQRHAASPDYTPSTPTPP--RRAASLDYT- 180
Query: 447 PNYPPKRYDNP 479
P+ PP R +P
Sbjct: 181 PSTPPPRAASP 191
Score = 28.3 bits (60), Expect = 5.0
Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 3/135 (2%)
Frame = +3
Query: 99 NPDYNPGQVHVVNYNPDYNPGQVHVVDH--NPDYNPGQVHVVDHNPDYYPGQVHVVDHNP 272
+PDY P +PDY P +P+Y P +PDY P P
Sbjct: 116 SPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAASPDYTPS-----TPTP 170
Query: 273 DYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDF-NHP 449
+ ++ P + D+ + +P P + P PS P S P+ + P
Sbjct: 171 PRRAASLDYTPSTPPPRAASPDYTPL-SPPPRAASPEYSPS--TPPPSPVPSDAESGTSP 227
Query: 450 NYPPKRYDNPLARGG 494
+ +R +P R G
Sbjct: 228 LWRRRRRHHPYQRRG 242
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = +3
Query: 102 PDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDYN 281
P Y P P Y P + P+Y+P V P Y P V P+Y
Sbjct: 655 PSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYA 714
Query: 282 P 284
P
Sbjct: 715 P 715
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/101 (24%), Positives = 32/101 (31%), Gaps = 2/101 (1%)
Frame = +3
Query: 102 PDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDYN 281
P Y P + P+Y+P V P Y P V P+Y P + P
Sbjct: 669 PVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGIT 728
Query: 282 PGQVHVVDN--SGVPSDGNSDHVVIANPDPFFSQPSNGPSG 398
P G P G + P P+ S GP G
Sbjct: 729 PSPPEYAPEPPPGPPGGGGGYLPPVVFPPPY---ASRGPPG 766
>07_03_0380 +
17460078-17460782,17461194-17461252,17461388-17461492,
17461732-17461867,17461919-17461939
Length = 341
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 234 YYPGQV-HVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIA 353
Y PG++ H+V+ P + G+ V + VP DG +H+V++
Sbjct: 275 YAPGRLYHIVERKP-FRCGRYPPVVRTAVPVDGRFEHIVLS 314
>12_02_0216 + 15804110-15804284,15804341-15804351
Length = 61
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 309 SGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAF 431
SG P+ +H V FF+ SN SGNY + G F
Sbjct: 12 SGSPAPPYKNHTVAGADGWFFNATSNTTSGNYSDWAAGETF 52
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/66 (22%), Positives = 28/66 (42%)
Frame = +3
Query: 219 DHNPDYYPGQVHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSG 398
D P P + + D P+ G + + N+G+P +S N +P + +
Sbjct: 329 DDEPTSIPKDILIKDE-PNTQDGNNNTIQNTGIPIIASSSEFTPMNVEPSIASSNEFTPM 387
Query: 399 NYEPIS 416
N EP++
Sbjct: 388 NVEPLN 393
>06_02_0109 - 11919279-11920109
Length = 276
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 159 GQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDH 266
G + + +PD PG++H +DH Q H +H
Sbjct: 68 GALDDISRSPDKKPGELHALDHRISSILQQYHHYNH 103
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 117 GQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDH 224
G + ++ +PD PG++H +DH Q H +H
Sbjct: 68 GALDDISRSPDKKPGELHALDHRISSILQQYHHYNH 103
>09_06_0343 -
22415525-22415833,22415999-22416134,22416593-22416697,
22417696-22418291
Length = 381
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 234 YYPGQVHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIA 353
Y PG+++ + + G+ V + VP DG +H+V++
Sbjct: 219 YAPGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIVLS 258
>03_05_0517 - 25118232-25118730,25119002-25119273
Length = 256
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 360 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRY 470
D FF++ P GN T P VD P P + +
Sbjct: 37 DWFFTRKGESPQGNISKEETAPTGVDVTDPGRPGRAF 73
>03_02_0269 + 7001891-7002212,7003598-7004037
Length = 253
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 495 SHHGREGCRIAWVDNWDD*NRR 430
+ H R+ R+AW D W D +R+
Sbjct: 62 TEHARQRMRVAWADGWVDGSRK 83
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 279 YSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQGCN*LRAPGLDYNQG 100
YS+ D+ R+ G D G L + S+ R R+ +S+ + R+P ++
Sbjct: 1216 YSRSPDRGRSRGYDRRSGSRSLSSRSRSRSRSWSRSRSRSRSWSRSRSRSRSPSRSRSRS 1275
Query: 99 YDR 91
YD+
Sbjct: 1276 YDQ 1278
>12_02_0219 + 15822050-15824896
Length = 948
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 1 DNSDTIRQ*KLSC-FSSSPYWPWLPQTECTWSIITLIII 114
D D +R+ ++ C F+ P WPWL +++ +++
Sbjct: 269 DFGDPLRKHEMHCRFTQGPPWPWLAVASSYGTLVISLLV 307
>11_04_0321 -
16359390-16359539,16359674-16359746,16360448-16360845,
16360919-16362673,16362751-16362861,16363745-16363962,
16364088-16364196
Length = 937
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 453 YPPKRYDNPLARGGK 497
YPPKRY NP+ G+
Sbjct: 859 YPPKRYSNPVGPAGR 873
>11_01_0532 +
4201374-4201401,4201475-4202652,4204316-4204670,
4204791-4204864,4206965-4207056,4207500-4207573,
4207680-4207822,4207889-4207909
Length = 654
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 261 DHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGP 425
DH+ D + V+ D+S VP D + D + DP + EP+S P
Sbjct: 40 DHSDDSDSAAVNEDDDSAVPEDAD-DETLAGAEDPVLDLREAEVLPSAEPVSAFP 93
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +3
Query: 237 YPGQVHVVDHNPDYNPGQVHVVDNSGVPSDG---NSDHVVIANPDPFFSQPSNGPSGNYE 407
Y + H Y PG V+ + GVP G S V I P P S+ P+ Y+
Sbjct: 74 YGAPMPAAHHQGAYQPGGVYRAPSPGVPVIGGYARSTPVTIRAPPP---SHSSAPA-PYQ 129
Query: 408 PISTGPA 428
P + PA
Sbjct: 130 PAAAAPA 136
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 235 IIQARCTWLITTLTIIQARFTW 300
++Q RC W+I +T + R TW
Sbjct: 551 VVQTRCRWIIGDVTEVLDRNTW 572
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,903,659
Number of Sequences: 37544
Number of extensions: 397634
Number of successful extensions: 1105
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -