Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E19
         (324 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85116-1|CAA59436.1|  288|Homo sapiens stomatin protein.               30   1.4  
X60067-1|CAA42671.1|  288|Homo sapiens erythrocyte band 7 integr...    30   1.4  
U33931-1|AAC50296.1|  296|Homo sapiens band 7.2b stomatin protein.     30   1.4  
M81635-1|AAA58432.1|  288|Homo sapiens stomatin peptide protein.       30   1.4  
CR542100-1|CAG46897.1|  288|Homo sapiens STOM protein.                 30   1.4  
BC010703-1|AAH10703.1|  288|Homo sapiens stomatin protein.             30   1.4  
AL359644-2|CAH70728.1|  288|Homo sapiens stomatin protein.             30   1.4  
AL161784-2|CAH72707.1|  288|Homo sapiens stomatin protein.             30   1.4  
BC142624-1|AAI42625.1|  955|Homo sapiens von Willebrand factor C...    29   3.2  
BC077719-1|AAH77719.1|  219|Homo sapiens VWCE protein protein.         29   3.2  
BC052564-1|AAH52564.1|  219|Homo sapiens VWCE protein protein.         29   3.2  
BC042143-1|AAH42143.1|  237|Homo sapiens VWCE protein protein.         29   3.2  
AK056571-1|BAB71219.1|  955|Homo sapiens protein ( Homo sapiens ...    29   3.2  
BC142632-1|AAI42633.1|  470|Homo sapiens angiopoietin-like 6 pro...    27   9.8  
AY358276-1|AAQ88643.1|  470|Homo sapiens NL8 protein.                  27   9.8  
AF230330-1|AAK06404.1|  470|Homo sapiens angiopoietin-related pr...    27   9.8  
AB054064-1|BAB91248.1|  470|Homo sapiens AGF protein.                  27   9.8  

>X85116-1|CAA59436.1|  288|Homo sapiens stomatin protein.
          Length = 288

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 292 GLYF*IPCTERFVQGKRRQVWFSIP 218
           GL+F +PCT+ F++   R + F IP
Sbjct: 80  GLFFILPCTDSFIKVDMRTISFDIP 104


>X60067-1|CAA42671.1|  288|Homo sapiens erythrocyte band 7 integral
           membrane  protein protein.
          Length = 288

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 292 GLYF*IPCTERFVQGKRRQVWFSIP 218
           GL+F +PCT+ F++   R + F IP
Sbjct: 80  GLFFILPCTDSFIKVDMRTISFDIP 104


>U33931-1|AAC50296.1|  296|Homo sapiens band 7.2b stomatin protein.
          Length = 296

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 292 GLYF*IPCTERFVQGKRRQVWFSIP 218
           GL+F +PCT+ F++   R + F IP
Sbjct: 88  GLFFILPCTDSFIKVDMRTISFDIP 112


>M81635-1|AAA58432.1|  288|Homo sapiens stomatin peptide protein.
          Length = 288

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 292 GLYF*IPCTERFVQGKRRQVWFSIP 218
           GL+F +PCT+ F++   R + F IP
Sbjct: 80  GLFFILPCTDSFIKVDMRTISFDIP 104


>CR542100-1|CAG46897.1|  288|Homo sapiens STOM protein.
          Length = 288

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 292 GLYF*IPCTERFVQGKRRQVWFSIP 218
           GL+F +PCT+ F++   R + F IP
Sbjct: 80  GLFFILPCTDSFIKVDMRTISFDIP 104


>BC010703-1|AAH10703.1|  288|Homo sapiens stomatin protein.
          Length = 288

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 292 GLYF*IPCTERFVQGKRRQVWFSIP 218
           GL+F +PCT+ F++   R + F IP
Sbjct: 80  GLFFILPCTDSFIKVDMRTISFDIP 104


>AL359644-2|CAH70728.1|  288|Homo sapiens stomatin protein.
          Length = 288

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 292 GLYF*IPCTERFVQGKRRQVWFSIP 218
           GL+F +PCT+ F++   R + F IP
Sbjct: 80  GLFFILPCTDSFIKVDMRTISFDIP 104


>AL161784-2|CAH72707.1|  288|Homo sapiens stomatin protein.
          Length = 288

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 292 GLYF*IPCTERFVQGKRRQVWFSIP 218
           GL+F +PCT+ F++   R + F IP
Sbjct: 80  GLFFILPCTDSFIKVDMRTISFDIP 104


>BC142624-1|AAI42625.1|  955|Homo sapiens von Willebrand factor C
           and EGF domains protein.
          Length = 955

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 CLRLPCTKRSVHGIQKYRPSIHTAYHQH 320
           CL  PC +R  + I  Y+ S  T +H H
Sbjct: 185 CLGTPCQQRCKNSIGSYKCSCRTGFHLH 212


>BC077719-1|AAH77719.1|  219|Homo sapiens VWCE protein protein.
          Length = 219

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 CLRLPCTKRSVHGIQKYRPSIHTAYHQH 320
           CL  PC +R  + I  Y+ S  T +H H
Sbjct: 185 CLGTPCQQRCKNSIGSYKCSCRTGFHLH 212


>BC052564-1|AAH52564.1|  219|Homo sapiens VWCE protein protein.
          Length = 219

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 CLRLPCTKRSVHGIQKYRPSIHTAYHQH 320
           CL  PC +R  + I  Y+ S  T +H H
Sbjct: 185 CLGTPCQQRCKNSIGSYKCSCRTGFHLH 212


>BC042143-1|AAH42143.1|  237|Homo sapiens VWCE protein protein.
          Length = 237

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 CLRLPCTKRSVHGIQKYRPSIHTAYHQH 320
           CL  PC +R  + I  Y+ S  T +H H
Sbjct: 203 CLGTPCQQRCKNSIGSYKCSCRTGFHLH 230


>AK056571-1|BAB71219.1|  955|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32009 fis, clone NT2RP7009498, weakly similar to
           FIBULIN-1, ISOFORM A PRECURSOR. ).
          Length = 955

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 CLRLPCTKRSVHGIQKYRPSIHTAYHQH 320
           CL  PC +R  + I  Y+ S  T +H H
Sbjct: 185 CLGTPCQQRCKNSIGSYKCSCRTGFHLH 212


>BC142632-1|AAI42633.1|  470|Homo sapiens angiopoietin-like 6
           protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 KPRGLADRNREPYLSSLALYETFGAW 274
           KP    DR+R+ Y  + ALY+  G W
Sbjct: 394 KPFSTVDRDRDSYSGNCALYQRGGWW 419


>AY358276-1|AAQ88643.1|  470|Homo sapiens NL8 protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 KPRGLADRNREPYLSSLALYETFGAW 274
           KP    DR+R+ Y  + ALY+  G W
Sbjct: 394 KPFSTVDRDRDSYSGNCALYQRGGWW 419


>AF230330-1|AAK06404.1|  470|Homo sapiens angiopoietin-related
           protein 5 protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 KPRGLADRNREPYLSSLALYETFGAW 274
           KP    DR+R+ Y  + ALY+  G W
Sbjct: 394 KPFSTVDRDRDSYSGNCALYQRGGWW 419


>AB054064-1|BAB91248.1|  470|Homo sapiens AGF protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 KPRGLADRNREPYLSSLALYETFGAW 274
           KP    DR+R+ Y  + ALY+  G W
Sbjct: 394 KPFSTVDRDRDSYSGNCALYQRGGWW 419


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,558,804
Number of Sequences: 237096
Number of extensions: 902068
Number of successful extensions: 1777
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1777
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)