Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E18
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    25   0.27 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   4.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   4.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.7  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 25.4 bits (53), Expect = 0.27
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 256 QTQTEHVLAPTSAPAVKPRPHITSEVSFKYDDLQVRLAAPY 378
           Q  +EH  +P S  +  P P    EV+ + ++L  + A PY
Sbjct: 212 QLVSEHPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPY 252


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -2

Query: 217 SCTIAPFVTYAGFQISI*LNPYCDE*PFSLHKC 119
           +C   PF+T     +   L  +    PF  +KC
Sbjct: 232 TCPKCPFITEYKHHLEYHLRNHAGSKPFQCNKC 264


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -1

Query: 425 YLPKPRSFASGFGCSW*GAASLTCRSSYLND 333
           Y+P    F     C+W    + T +SS   D
Sbjct: 5   YVPNNPQFGLQLECNWSSGPNATLQSSACTD 35


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 241 EENAAQTQTEHVLA 282
           EEN A T TEH L+
Sbjct: 465 EENLALTSTEHSLS 478


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 241 EENAAQTQTEHVLA 282
           EEN A T TEH L+
Sbjct: 290 EENLALTSTEHSLS 303


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 200 VCNLCWFSNIHLTKPVL 150
           +C L WF     T P+L
Sbjct: 190 ICLLAWFIAALFTSPIL 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,212
Number of Sequences: 336
Number of extensions: 2271
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)