Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E18
         (476 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21859| Best HMM Match : Aminotran_4 (HMM E-Value=4.5e-31)           30   1.1  
SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.1  
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)                     27   6.0  
SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012)               27   7.9  

>SB_21859| Best HMM Match : Aminotran_4 (HMM E-Value=4.5e-31)
          Length = 215

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 385 QPKPEAKDLGFGKYFTDHML 444
           +PKP+   L FGK FTDH L
Sbjct: 13  KPKPDPNTLVFGKEFTDHAL 32


>SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2324

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/58 (22%), Positives = 29/58 (50%)
 Frame = +1

Query: 166  KWIFENQHKLQTVRWCSSSLRYKELEENAAQTQTEHVLAPTSAPAVKPRPHITSEVSF 339
            +++ + QH +QT+  C + L +++ E    Q Q + +    S    +P P +  + S+
Sbjct: 946  RFLADQQHLMQTLNQCYNQLNHQQQELGFLQNQFQQLFPSASPEPRQPSPMMGFQPSY 1003


>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
          Length = 991

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 234 GTGRKRGANSNRTRVSP-HERARSQATPTH 320
           GTG +   N NRTR+ P H   R++  P H
Sbjct: 893 GTGIEPEHNMNRTRIKPEHNMNRTRIEPEH 922


>SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012)
          Length = 1119

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 223 LRYKELEENAAQTQTEHVLAPTSAPA 300
           LR KELE  A +T  E + APT A A
Sbjct: 893 LRQKELEIQARRTMLEKMAAPTIASA 918


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,913,304
Number of Sequences: 59808
Number of extensions: 271602
Number of successful extensions: 623
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)