Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_E18
(476 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 30 0.048
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 24 2.4
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 24 2.4
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 3.1
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 23 5.5
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 5.5
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 7.2
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 22 9.6
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 22 9.6
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 29.9 bits (64), Expect = 0.048
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 148 RNTGLVKWIFENQHKLQTVRWCSSSLRYKELEENAAQTQTEHVLAPTS 291
RNT L+ IF +QH + + +S ++++ L+ + A+T + P S
Sbjct: 118 RNTFLIGQIFPSQHHIGIISRLNSDVQFRSLDLSKAKTTVRLLKKPPS 165
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 350 TCK*GSLLLTNYNRSLRRKTLVSVNTLLIICLKSIFTEHLV 472
TC L +N ++RRKTL L+I C+ F LV
Sbjct: 220 TCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILV 260
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 24.2 bits (50), Expect = 2.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 383 YNRSLRRKTLVSVNTLLIICLKSIFTEHLV 472
+N +LRRKTL L+I C+ F LV
Sbjct: 231 FNITLRRKTLFYTVNLIIPCVGISFLSVLV 260
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.8 bits (49), Expect = 3.1
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 140 LFVAIRV*LNGYLKTSISYKRCDGAARHCVIRNWKKTRRKLKQNTC*PP 286
LF +R L +KT + + R+ + + WK+T KL PP
Sbjct: 1511 LFAVVRTSLK--IKTEGNIDDANAELRNTIKQIWKRTNPKLLDQVVPPP 1557
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 23.0 bits (47), Expect = 5.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 383 YNRSLRRKTLVSVNTLLIICLKSIFTEHLV 472
+N +LRRKTL L+I C+ + LV
Sbjct: 244 FNITLRRKTLFYTVNLIIPCVGISYLSVLV 273
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.0 bits (47), Expect = 5.5
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +1
Query: 184 QHKLQTVRWCSSSLRYKELEENAAQTQTEHVLAPTSAPAVKPRPHITSEVSFKYDDLQVR 363
QH V +++ +E ++ ++ +Q P +A A P P T + QV
Sbjct: 879 QHHAAMVAAAAAAAASQEQQQRSSSSQQHR--GPGAAAATGPPPP-THRLE---QPPQVV 932
Query: 364 LAAPYQLQPKPEA 402
AAP Q QP P A
Sbjct: 933 AAAPTQQQPLPPA 945
Score = 22.6 bits (46), Expect = 7.2
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = +1
Query: 226 RYKELEENAA-QTQTEHVLAPTSAPAVKPRPHITSEVSFKYDDLQVRLAAPYQLQPKPEA 402
R KE E AA + + E + PH F L L+AP L +P+
Sbjct: 513 REKEREREAARERERERERERERERMMHMMPHSLPRPFFSIPGLPPGLSAPLGLGMRPQG 572
Query: 403 KDLGFGKYFTDH 438
LG + H
Sbjct: 573 GPLGLPSHHPLH 584
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 22.6 bits (46), Expect = 7.2
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 169 WIFENQHKLQTVRWCS-SSLRYKELEEN 249
W+ E K Q + W S SS + K E N
Sbjct: 801 WVHEEDRKFQRILWRSHSSEKIKTYELN 828
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 350 TCK*GSLLLTNYNRSLRRKTLVSVNTLLIICL 445
TC L +N ++RRKTL ++I C+
Sbjct: 224 TCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 255
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 350 TCK*GSLLLTNYNRSLRRKTLVSVNTLLIICL 445
TC L +N ++RRKTL ++I C+
Sbjct: 224 TCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 255
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,017
Number of Sequences: 2352
Number of extensions: 8502
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -