Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E16
         (565 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    31   0.76 
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    31   0.76 

>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 76  SSRVVNTIPFIVDRPFYYTLKYKQNFLFNGVY 171
           S+R+   + FI D PF++T+ +  + +F GV+
Sbjct: 329 SARMEQPVNFIADHPFFFTITFLNHPIFVGVF 360


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 76  SSRVVNTIPFIVDRPFYYTLKYKQNFLFNGVY 171
           S+R+   + FI D PF++T+ +  + +F GV+
Sbjct: 329 SARMEQPVNFIADHPFFFTITFLNHPIFVGVF 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,347,569
Number of Sequences: 27780
Number of extensions: 208020
Number of successful extensions: 390
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)