Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_E14
(556 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 59 2e-09
11_02_0012 - 7346282-7347136,7347234-7347593 58 5e-09
11_02_0011 - 7337618-7338496,7338596-7338991 57 8e-09
05_06_0044 - 25150322-25151260 52 2e-07
04_04_0619 + 26652923-26653267,26653440-26654273 52 4e-07
04_04_0620 + 26656072-26656417,26656585-26657396 50 9e-07
01_06_0824 - 32243495-32244319,32244449-32244859 48 5e-06
11_01_0771 + 6453130-6454488 46 3e-05
01_01_1152 + 9170628-9171899 46 3e-05
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 45 4e-05
11_01_0750 - 6315126-6315896,6316371-6316784 44 8e-05
11_01_0767 + 6438648-6438809,6439146-6440000 43 2e-04
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 27 7.6
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKA-GEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLM 379
F M +LLP+ DGL S+ +K E +E+ +RP + + ++PKF+I L+
Sbjct: 565 FSMYILLPEAQDGLWSLAEKLNSEPEFMENHIPMRPVH-VGQFKLPKFKISFGFGASGLL 623
Query: 378 PKFGVSKIFNEPAPNIVKGDS-----VVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPYSS 214
G+ +F I DS + VS F ++FI+V+EE
Sbjct: 624 KGLGLPLLFGSEVDLIEMVDSPGAQNLFVSSVFHKSFIEVNEEGTEATAAVMVS----ME 679
Query: 213 HSRPRQPLVFKVDHPFAYFILYED 142
HSRPR+ L F DHPF F++ ED
Sbjct: 680 HSRPRR-LNFVADHPF-MFLIRED 701
Score = 46.4 bits (105), Expect = 2e-05
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKA-GEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLM 379
F M +LLP+ DGL S+ +K E LE R + ++PKF+I + L+
Sbjct: 313 FSMYILLPEAQDGLWSLAEKLNSEPEFLEKHIPTRQVT-VGQFKLPKFKISFGFEASDLL 371
Query: 378 PKFGVSKIFNEPAP-----NIVKGDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPYSS 214
G+ F+ A + +G ++ VS F ++F++V+EE +
Sbjct: 372 KSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEVNEEGTEAAAATAAV---ITL 428
Query: 213 HSRPRQPLVFKVDHPFAYFILYEDK---IIFAG 124
S P F DHPF F++ ED ++F G
Sbjct: 429 RSAPIAE-DFVADHPF-LFLIQEDMTGVVLFVG 459
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 58.0 bits (134), Expect = 5e-09
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Frame = -2
Query: 549 MLVLLPDKLDGLSSVLDK--AGEKGLLEDVFRL--RPTNRKVK---LEMPKFEIKSKLDL 391
M + LPD DGL +++DK G F RP R++K L +P+F++ ++
Sbjct: 244 MYIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRFKVSFYSEM 303
Query: 390 KPLMPKFGVSKIFNEPAPNI---VKGDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPY 220
++ G+ F+ ++ + G+ VVV + A ++V+EE
Sbjct: 304 NEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEEGTEAAAATACTMKFL 363
Query: 219 SSHSRPRQPLVFKVDHPFAYFILYE--DKIIFAG 124
P+ F DHPFA+F++ E D ++FAG
Sbjct: 364 CLTLT--SPVDFVADHPFAFFVVEEKSDAVLFAG 395
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 57.2 bits (132), Expect = 8e-09
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = -2
Query: 549 MLVLLPDKLDGLSSVLDKAGEKGLLEDVFR-LRPTNRKV--KLEMPKFEIKSKLDLKPLM 379
M + LPD+ DGL +++DK R RPT R+ L +P+F++ + ++
Sbjct: 264 MYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYSQINGVL 323
Query: 378 PKFGVSKIFNEPAPNI--------VKGDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVP 223
GV+ F+ ++ +G +VV E F A ++V+EE
Sbjct: 324 QGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAASTACTIR- 382
Query: 222 YSSHSRPRQPLVFKVDHPFAYFILYEDK--IIFAG 124
S S P F DHPFA+F++ E ++FAG
Sbjct: 383 LLSMSYPED---FVADHPFAFFVVEETSGAVLFAG 414
>05_06_0044 - 25150322-25151260
Length = 312
Score = 52.4 bits (120), Expect = 2e-07
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKAGEKG---LLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKP 385
F M + LPD DGL + K L + +P +L++PKFE+ K++
Sbjct: 153 FAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPV-AVGELKIPKFEVSLKVEASR 211
Query: 384 LMPKFGVSKIFNEPAPNIVKG------DSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVP 223
L+ +FG+ F A N G VS + F+ V+EE +
Sbjct: 212 LLREFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAAGTVGEIMG 271
Query: 222 YSSHSRPRQPLV-FKVDHPFAYFILYE--DKIIFAG 124
+ + P +V F DHPF +FI+ E ++FAG
Sbjct: 272 F---AMPDDQIVDFVADHPFLFFIVEEVSGLVVFAG 304
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 51.6 bits (118), Expect = 4e-07
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFRLRPTNRK--VKLEMPKFEIKSKLDLKPL 382
F MLV LP K DGL +L A + + V R P + + +PKF+ S+LD +
Sbjct: 228 FCMLVFLPIKRDGLRHLLRMAVTEP--DFVMRCVPRSEQEVSPCMVPKFKFSSELDARGA 285
Query: 381 MPKFGVSKIFNEPAPNIVK--------GDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXV 226
+ K G+ F+ A ++ + + + VS Q+ ++VDEE
Sbjct: 286 LAKLGLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVDEEGTTAVEATYSCCS 345
Query: 225 P-YSSHSRPR-QPLVFKVDHPFAYFIL-YED-KIIFAG 124
P YS P+ +P+ F +HPF + I+ YE +++F G
Sbjct: 346 PTYSGPESPKPRPMSFVAEHPFMFAIVEYEKAQVLFLG 383
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 50.4 bits (115), Expect = 9e-07
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFRLRPTNRKV--KLEMPKFEIKSKLDLKPL 382
F MLV LP K DGL +L A + + V R P +R++ ++PKF+ S+LD
Sbjct: 221 FCMLVFLPIKRDGLRHLLRMAVTEP--DFVTRCVPRSRQIVTPCKVPKFKFSSQLDAGGA 278
Query: 381 MPKFGVSKIFNEPAPNIVK------GDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVP- 223
+ + G+ F+ A ++ + + VS Q+ ++VDEE P
Sbjct: 279 LAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVDEEGTTAVEAMYSPSSPG 338
Query: 222 YS-SHSRPR-QPLVFKVDHPFAYFILYEDK--IIFAG 124
YS + PR P+ F +HPF + I+ K ++F G
Sbjct: 339 YSPGYQPPRPPPMSFVAEHPFMFAIVEYKKAQVLFLG 375
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 48.0 bits (109), Expect = 5e-06
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDK--AGEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPL 382
F M + LPD+ GL +L K + L+E L +P+F + K +
Sbjct: 247 FSMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAAET 306
Query: 381 MPKFGVSKIFNEPAPNIVK-------GDSVVVSEAFQEAFIKVDEE-XXXXXXXXXXXXV 226
+ + G+ F P ++ + + +VVS + E+F++V+EE +
Sbjct: 307 LRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHESFVEVNEEGTEAAAATAVVMTL 366
Query: 225 PYSSHSRPRQPLVFKVDHPFAYFILYED---KIIFAGTYTH 112
++ S P + F DHPF F++ ED ++FAG T+
Sbjct: 367 GCAAPSAPVHVVDFVADHPF-MFLIKEDLTGVVVFAGQVTN 406
>11_01_0771 + 6453130-6454488
Length = 452
Score = 45.6 bits (103), Expect = 3e-05
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDK-AGEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLM 379
+ M + LPD DGL ++++ A G L + + +PKF++ + +
Sbjct: 294 YAMAIFLPDARDGLRGLVERMASRPGFLHEHMPAAWPVPVGEFRVPKFKVSCGGSVVGAL 353
Query: 378 PKFGVSKIFNEPAPNI---VKGDS----VVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPY 220
+ G+ F+ ++ V+ D + V + +A I+V+EE +P
Sbjct: 354 EQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRMLPS 413
Query: 219 SSHSRPRQPLVFKVDHPFAYFILYE--DKIIFAG 124
P P+ F +HPFAYFI+ E ++FAG
Sbjct: 414 GV---PPPPVDFVAEHPFAYFIVEEMSSAVVFAG 444
>01_01_1152 + 9170628-9171899
Length = 423
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFRLRPTNRKV---KLEMPKFEIKSKLDLKP 385
F ML+LLPD DG + D + + + +L +PKF+ K + K
Sbjct: 269 FYMLLLLPDG-DGALKLADLYDMAVTTPEFIKKHTPAAEAPVRRLMVPKFKFSFKFEAKS 327
Query: 384 LMPKFGVSKIF--NEPAPNIVKGDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPYSSH 211
M K GV++ F + + + GD + ++E + +A I+VDE + S
Sbjct: 328 DMRKLGVTRAFAGGDFSGMVTGGDGLFIAEVYHQATIEVDELGTVAAASTAVVMMQKGS- 386
Query: 210 SRPRQPLVFKVDHPFAYFILYE--DKIIFAG 124
S P P+ F D PF + ++ E ++F G
Sbjct: 387 SLP--PVDFVADRPFLFAVVEELTGAVLFLG 415
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 45.2 bits (102), Expect = 4e-05
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKA-GEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLM 379
F M +LLP+ DGL S+ K E LE R K ++PKF+I + L+
Sbjct: 105 FSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVT-VGKFKLPKFKISFGFEASDLL 163
Query: 378 PKFGVSKIFNEPAP-----NIVKGDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPYSS 214
G+ F+ A + ++ VS F ++F++VDEE S
Sbjct: 164 KILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGTEAAAASAAV---VSF 220
Query: 213 HSRPRQPLVFKVDHPFAYFILYED 142
S P + F DHPF F++ ED
Sbjct: 221 RSAP-VTVDFVADHPF-LFLIRED 242
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.0 bits (99), Expect = 8e-05
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 10/154 (6%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKA-GEKGLLEDVFRLRPTNR-KVKLEMPKFEIKSKLDLKPL 382
F M + LPD DGL + K E LE PT + V + +P F+I ++D+K
Sbjct: 242 FSMYIFLPDDHDGLFELTQKIFSEPMFLEQHL---PTEKCHVGISVPNFKISFQIDVKDF 298
Query: 381 MPKFGVSKIFNEPA--PNIVKGDS----VVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPY 220
+ G+ F A +++K D + +S+ +A ++VD++ P
Sbjct: 299 LKDMGLELPFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLEVDQKGIEETSVSMGLGKPL 358
Query: 219 SSHSRPRQPLVFKVDHPFAYFILYE--DKIIFAG 124
P Q FK DHPF + I E +IF G
Sbjct: 359 -----PAQH--FKADHPFFFMIREEVSGTVIFMG 385
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 42.7 bits (96), Expect = 2e-04
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Frame = -2
Query: 555 FRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFRLRPTNRKV-KLEMPKFEIK-SKLDLKPL 382
F MLV LPD DGL +LD+ D L P V + +PKF++ + +
Sbjct: 169 FAMLVFLPDDRDGLPGLLDRITASPEFVDE-HLPPGCVPVGRFRVPKFKLAFCHYGIADV 227
Query: 381 MPKFGVSKIFN----EPAPNIVKGD----SVVVSEAFQEAFIKVDEEXXXXXXXXXXXXV 226
+ G+ F+ E + V+GD ++ VS + ++V+EE
Sbjct: 228 LRGLGLRLPFDMFAAEMSGIAVEGDGEDAAMFVSSVIHKVVVEVNEEGSEAAAYTEESDD 287
Query: 225 P-----YSSHSRPRQPLV-FKVDHPFAYFILYE--DKIIFAG 124
Y P LV F DHPFA+FI+ E I+FAG
Sbjct: 288 DLGCSLYDDDYTPPPKLVDFVADHPFAFFIVEERSQAIVFAG 329
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 23 CKQTFISIINKK-NVYDCFKINDSVSKVL 106
CKQTF+ + KK + Y FKI+D +V+
Sbjct: 20 CKQTFLELQRKKSHRYVIFKIDDKCKEVV 48
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,990,982
Number of Sequences: 37544
Number of extensions: 274481
Number of successful extensions: 725
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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