Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E14
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.8  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   6.3  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   6.3  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   6.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.4  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 96  LTESLILKQSYTFFLLMME 40
           LT+SLI  Q++ FFL   E
Sbjct: 289 LTDSLIAAQAFVFFLAGFE 307


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = +2

Query: 284 NASWKASDTTTLSPLTMFGAGSLNIFETPNLGIKGLRSN-LLFISNFGISNFT 439
           N+ W AS    L+P +  G   L+  E     ++ L  N L  + N    N T
Sbjct: 127 NSVWGASRFLELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLT 179


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 274 YFDKCLLEGFRHYYTVTL 327
           Y ++CLLE  R Y  V L
Sbjct: 399 YLERCLLETLRMYPPVPL 416


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 401 NWTLNL*CPSLEFRKYSTSLHQTSS 327
           NW L + C S+  +  ++++HQ  S
Sbjct: 3   NWLLLIVCLSIACQDVTSAIHQRKS 27


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 256 CGSFFIYFDKCLL 294
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 256 CGSFFIYFDKCLL 294
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 256 CGSFFIYFDKCLL 294
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 244 ESAGCGSFFIYFDKC 288
           ES      + YFDKC
Sbjct: 454 ESVNIDKLYTYFDKC 468


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 244 ESAGCGSFFIYFDKC 288
           ES      + YFDKC
Sbjct: 454 ESVNIDKLYTYFDKC 468


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 461 LNTSSRRPFSPALSNTDDKPSSLSGS 538
           LN SSRR      +  D+KP  +S +
Sbjct: 246 LNVSSRRSDMNGTTPLDEKPLDVSSN 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,881
Number of Sequences: 438
Number of extensions: 3053
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)