Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E10
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   5.5  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   7.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.5  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +2

Query: 248 YH*NPRHRAPPMFVFVLAVCMCTVLYGFLPERXXXXXXXXXVFGDI 385
           YH +       MF+  LAV    V    LP           +FGD+
Sbjct: 91  YHTSKLRNVTNMFIVSLAVADLMVGLAVLPFSATWEVFKVWIFGDL 136


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +3

Query: 129 GAITSFLITTMNIAPVGPNPANL---VCPSCRATIVTKVNRKATTKTHVIAL 275
           G +TS L      AP G   ANL   + P  R+    K  R+  T+   + L
Sbjct: 234 GVVTSPLSQQQQAAPQGAASANLPSPLYPWMRSQFERKRGRQTYTRYQTLEL 285


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 463 SYNNYKITYKSHEKFI*LNV 404
           +YNNY   Y ++ K +  N+
Sbjct: 93  NYNNYNNNYNNYNKKLYYNI 112


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 337 RTLTITAPTATRIW 378
           RT TITA T  ++W
Sbjct: 176 RTATITAATDCQLW 189


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 376 WGHTNNNSLVRSII 417
           WGHT+ N ++  I+
Sbjct: 297 WGHTSFNGMLSHIL 310


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,372
Number of Sequences: 438
Number of extensions: 3574
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)