Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_E09
(462 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0684 - 5161218-5161427,5161509-5161616,5162217-5162390,516... 52 2e-07
07_01_0686 - 5184061-5184267,5184655-5184762,5185405-5185578,518... 48 5e-06
03_06_0354 - 33333634-33333840,33334106-33334213,33335384-333355... 48 5e-06
03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133... 40 0.001
12_02_0844 - 23609783-23609926,23610014-23610331,23610771-236109... 31 0.45
06_01_0877 + 6728883-6729651,6729989-6730224,6730423-6730704,673... 31 0.45
12_01_0949 - 9434951-9435131,9435555-9435682,9436493-9436666,943... 30 1.0
05_03_0316 + 12242823-12242964,12243032-12243282,12243370-122435... 30 1.0
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 29 1.4
01_04_0083 - 15838922-15839065,15839153-15839443,15839555-158396... 29 1.4
07_01_0559 + 4151054-4151178,4151306-4153018,4153121-4153412,415... 29 1.8
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 29 2.4
12_02_0210 - 15617770-15618453 28 3.2
03_05_0761 - 27515441-27515650,27515967-27516074,27516666-275168... 28 3.2
01_03_0114 - 12649104-12649141,12650137-12650245,12650500-126506... 28 3.2
08_01_0217 + 1738321-1739104,1739683-1739915,1740002-1740292,174... 27 5.6
04_03_0387 - 15251816-15251905,15251999-15252069,15252098-152523... 27 7.3
>07_01_0684 -
5161218-5161427,5161509-5161616,5162217-5162390,
5162515-5162643,5162722-5163009,5163114-5163346,
5164235-5165060
Length = 655
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Frame = +3
Query: 6 SFEDNFDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRA----VSKIDLFI 173
+ ED LN DI + + A P P ++ P R+L S + RA ++LFI
Sbjct: 356 TLEDATGLSLNGDID--IESIFASSLPNSHP-SFAPERYLEMSEQWRAPPLPTEPVELFI 412
Query: 174 AVKSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEFRDII 353
+ SA +F R A+RK++ + N+ FF+ ++G K + + RE F+DI+
Sbjct: 413 GILSAASHFAERMAVRKSWMMYTRKSTNIVARFFVALNG--KKEVNAELKREAEFFQDIV 470
Query: 354 QMDFRD 371
+ F D
Sbjct: 471 IVPFMD 476
>07_01_0686 -
5184061-5184267,5184655-5184762,5185405-5185578,
5185680-5185808,5185891-5186178,5186341-5186570,
5186619-5187516
Length = 677
Score = 47.6 bits (108), Expect = 5e-06
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Frame = +3
Query: 57 VRDVIAGRKPTVDPINYYPYRFLSNSGECRAV----SKIDLFIAVKSAMRNFDHRDAIRK 224
V+ V AG PT P ++ P +L S ++ +D+FI + S+ +F R +RK
Sbjct: 394 VQSVFAGSLPTTHP-SFSPQSYLDMSTVWQSSPLPNEPVDIFIGILSSGNHFAERMGVRK 452
Query: 225 TYGRAKIEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEFRDIIQMDFRDXXXXXXXXXXD 404
T+ A NV FF+ + G + N++ + + E F DI+ + F D D
Sbjct: 453 TWMSAVRNSPNVVARFFVALHGRKEVNVELKKEAEF--FGDIVFVPFLD--------NYD 502
Query: 405 VVPLALRALCRCGFLLV 455
+V L A+C G +V
Sbjct: 503 LVVLKTLAICEYGVHVV 519
>03_06_0354 -
33333634-33333840,33334106-33334213,33335384-33335557,
33335637-33335765,33335858-33336145,33336257-33336489,
33336607-33337435
Length = 655
Score = 47.6 bits (108), Expect = 5e-06
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Frame = +3
Query: 12 EDNFDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRAV----SKIDLFIAV 179
ED LN D+ V+ V AG PT P ++ P + L +A I++FI +
Sbjct: 359 EDATGLSLNGDLD--VQSVFAGTLPTAHP-SFSPQKHLEMLPIWQAPPLPDEPIEIFIGI 415
Query: 180 KSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEFRDIIQM 359
SA +F R A+RKT+ A + NV FF+ ++ + N + + + E F DI+ +
Sbjct: 416 LSAGNHFAERMAVRKTWMSAAQKSSNVVARFFVALNSRKEVNAELKKEAEF--FGDIVIV 473
Query: 360 DFRDXXXXXXXXXXDVVPLALRALCRCGFLLV 455
F D D+V L A+C G +V
Sbjct: 474 PFMD--------SYDLVVLKTVAICEYGVRVV 497
>03_06_0352 -
33312443-33312652,33312747-33312854,33313224-33313397,
33313489-33313695,33313700-33313987,33314087-33314319,
33314450-33315263
Length = 677
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +3
Query: 6 SFEDNFDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRA----VSKIDLFI 173
S ED L D+ + ++AG P P ++ P R+L S + +A ++LFI
Sbjct: 352 SLEDATGLSLKGDLD--IESILAGHLPNSHP-SFAPQRYLEMSEQWKAPPLPTEPVELFI 408
Query: 174 AVKSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGV 284
+ SA +F R A+RK++ + NV FF+ +
Sbjct: 409 GILSAANHFAERMAVRKSWMIDTRKSSNVVARFFVAL 445
>12_02_0844 -
23609783-23609926,23610014-23610331,23610771-23610926,
23611068-23611318,23611384-23611530,23612450-23612501,
23612628-23612763,23613507-23613538
Length = 411
Score = 31.1 bits (67), Expect = 0.45
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 60 RDVIAGRKPTVDPINYYPYRFL--SNSGECRAVSKIDLFIA 176
R + G PT+ P NYY RFL S S E S ++ FI+
Sbjct: 293 RGRVRGMGPTITPTNYYGRRFLNISGSNEGNGSSNVNGFIS 333
>06_01_0877 +
6728883-6729651,6729989-6730224,6730423-6730704,
6731297-6731335,6731719-6731826,6731873-6732220
Length = 593
Score = 31.1 bits (67), Expect = 0.45
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 42 DIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRAVSKIDLFIAVKSAMRNFDHRDAIR 221
DIK L VIA PT + + + + +DLFI + S NF R A+R
Sbjct: 350 DIKLL--SVIASGLPTTEDFEHVTDLEILKAPPVPMDKPLDLFIGIFSTANNFKRRMAVR 407
Query: 222 KTYGR-AKIEGRNVKTLFFLGV 284
+T+ + + FF+G+
Sbjct: 408 RTWMQYDAVRSGKAAVRFFVGL 429
>12_01_0949 -
9434951-9435131,9435555-9435682,9436493-9436666,
9436978-9437193,9437376-9437522
Length = 281
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 159 IDLFIAVKSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGV 284
+D+FI + S+ +F R +RKT+ A NV FF+ +
Sbjct: 80 VDIFIGILSSGNHFAERMGVRKTWMSAVRNSPNVVARFFVAL 121
>05_03_0316 +
12242823-12242964,12243032-12243282,12243370-12243573,
12243660-12243752,12243828-12243926,12244006-12244308
Length = 363
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 69 IAGRKPTVDPINYYPYRFLSNSG 137
+ G PT+ P NYY RFL+ SG
Sbjct: 301 VRGMGPTITPTNYYGGRFLNMSG 323
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 29.5 bits (63), Expect = 1.4
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +3
Query: 54 LVRDVIAGRKPTVDPINYYPYRFLSNSGECRAVSKIDLFIAVKSAMRNFDHRDAIRKTYG 233
LV + +G + D N + L +S +DL I + S NF R AIR+T+
Sbjct: 367 LVSAIASGLPTSEDLENSFDLAMLKSSPIPEG-KDVDLLIGIFSTANNFKRRMAIRRTWM 425
Query: 234 R--AKIEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEFRDIIQMDFRD 371
+ A EG V FF+G+ + K + E + DI + F D
Sbjct: 426 QYDAVREGA-VVVRFFVGL--HTNLIVNKELWNEARTYGDIQVLPFVD 470
>01_04_0083 -
15838922-15839065,15839153-15839443,15839555-15839653,
15839733-15839825,15839913-15840116,15840209-15840459,
15841045-15841096,15841527-15841625,15842222-15842299
Length = 436
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 69 IAGRKPTVDPINYYPYRF--LSNSGECRAVSKIDLFIA 176
+ G PT+ P NYY RF +S S E + S ++ FI+
Sbjct: 321 VRGMGPTITPTNYYGGRFSNISGSSEGSSSSNVNGFIS 358
>07_01_0559 + 4151054-4151178,4151306-4153018,4153121-4153412,
4154327-4154636,4155041-4155261
Length = 886
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = +3
Query: 90 VDPINYYPYRF-----LSNSGECRAVSKIDLFIAVKSAMRNFDHRDAIRKTYGRAKIEGR 254
+DP+ YPYR+ + + E A++++ IA K+ + R A + G R
Sbjct: 800 LDPLRVYPYRYRAAVLMDSHKEKEAIAELTRAIAFKADLHLLHLRAAFHEHIGDVPSALR 859
Query: 255 NVKTLFFLGVDGSPKSNIQKRIDRE 329
+ + L + +QKR++ +
Sbjct: 860 DCRAALSLDPNHQEMLELQKRVNSQ 884
>03_02_0774 + 11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 246 EGRNVKTLFFLGVDG-SPKSNIQKRIDREMGEFRDIIQMD 362
+G V+TL +GV SPK KR+ R + D+I +D
Sbjct: 895 KGAEVRTLDLIGVQPPSPKPKTLKRLRRRLSADTDVINID 934
>12_02_0210 - 15617770-15618453
Length = 227
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 399 CFYSVYYSSYRENPF-VLYP*IRPFPCLY 316
CF S Y SS R NPF V+Y P C Y
Sbjct: 129 CFNSAYRSSLRSNPFQVVYGWPPPTLCCY 157
>03_05_0761 -
27515441-27515650,27515967-27516074,27516666-27516839,
27517185-27517469,27517688-27517920,27519422-27520139
Length = 575
Score = 28.3 bits (60), Expect = 3.2
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Frame = +3
Query: 6 SFEDNFDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRAV----SKIDLFI 173
S ED +N D+ ++ ++AG P P N R L E +A I+LFI
Sbjct: 320 SLEDAAILSVNGDVD--IQSIVAGSLPMAYPRN--AQRNLELLTELKAPPLPEEPIELFI 375
Query: 174 AVKSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGV 284
+ SA +F R A+R+++ + FF+ +
Sbjct: 376 GILSAGSHFTERMAVRRSWMSSVRNSSGAMARFFVAL 412
>01_03_0114 -
12649104-12649141,12650137-12650245,12650500-12650691,
12650797-12650904,12650986-12651162,12652331-12652459,
12653314-12653589,12653667-12653916,12654909-12655561
Length = 643
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 156 KIDLFIAVKSAMRNFDHRDAIRKTYGRAK-IEGRNVKTLFFLGVDGSPKSNIQKRIDREM 332
+I L I V S NF R A+R+T+ + + + V FF G+ + + N++ I +E
Sbjct: 350 RIFLLIGVFSTGNNFKRRMALRRTWMQYEAVRLGEVAVRFFTGLHKNEQVNME--ILKEA 407
Query: 333 GEFRDIIQMDFRD 371
+ DI M F D
Sbjct: 408 QMYGDIQFMPFVD 420
>08_01_0217 +
1738321-1739104,1739683-1739915,1740002-1740292,
1740524-1740616,1740912-1741040,1741522-1741695,
1741883-1741990,1742073-1742279
Length = 672
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 165 LFIAVKSAMRNFDHRDAIRKTYGR-AKIEGRNVKTLFFLGV 284
LFI + SA +F R A+RKT+ + +++ V FF+ +
Sbjct: 396 LFIGILSASNHFAERMAVRKTWMQSSEVRSSKVVARFFVAL 436
>04_03_0387 -
15251816-15251905,15251999-15252069,15252098-15252323,
15252344-15252496,15252570-15252656,15252745-15252948,
15253038-15253159,15253354-15253507,15254329-15254434,
15254507-15254617,15256468-15256622
Length = 492
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 69 IAGRKPTVDPINYYPYRFLSNS 134
+ G PT+ P NYY RFL+ S
Sbjct: 402 VRGMGPTITPTNYYGGRFLNIS 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,125,942
Number of Sequences: 37544
Number of extensions: 181614
Number of successful extensions: 403
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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