Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_E09
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68752-6|CAD27607.1| 322|Caenorhabditis elegans Hypothetical pr... 38 0.003
AY038065-1|AAK72094.1| 322|Caenorhabditis elegans beta 1,3-gala... 38 0.003
Z83239-1|CAB05807.1| 325|Caenorhabditis elegans Hypothetical pr... 33 0.13
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 28 2.8
U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer ... 28 2.8
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 28 2.8
AL110485-25|CAB60373.1| 672|Caenorhabditis elegans Hypothetical... 27 4.9
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 27 4.9
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 27 4.9
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 27 4.9
Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z71178-12|CAD44086.1| 342|Caenorhabditis elegans Hypothetical p... 27 6.5
AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical... 27 6.5
Z81564-8|CAB04571.1| 140|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z69661-1|CAA93493.1| 253|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF039053-16|AAC25869.1| 497|Caenorhabditis elegans Cytochrome p... 27 8.6
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 27 8.6
AC006645-5|AAF39839.2| 105|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z68752-6|CAD27607.1| 322|Caenorhabditis elegans Hypothetical
protein T12G3.8 protein.
Length = 322
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 165 LFIAVKSAMRNFDHRDAIRKTYGRAK-IEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEF 341
+ I +KS+ +N R+++RKT+G + I+G V +F +G I +RID E ++
Sbjct: 79 IIIIIKSSAKNGPMRESVRKTWGVFRMIDGVEVMPIFIVG--RVENMEIMRRIDVESEKY 136
Query: 342 RDII 353
+DI+
Sbjct: 137 KDIL 140
>AY038065-1|AAK72094.1| 322|Caenorhabditis elegans beta
1,3-galactosyltransferaseBRE-5 protein.
Length = 322
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 165 LFIAVKSAMRNFDHRDAIRKTYGRAK-IEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEF 341
+ I +KS+ +N R+++RKT+G + I+G V +F +G I +RID E ++
Sbjct: 79 IIIIIKSSAKNGPMRESVRKTWGVFRMIDGVEVMPIFIVG--RVENMEIMRRIDVESEKY 136
Query: 342 RDII 353
+DI+
Sbjct: 137 KDIL 140
>Z83239-1|CAB05807.1| 325|Caenorhabditis elegans Hypothetical
protein T09F5.1 protein.
Length = 325
Score = 32.7 bits (71), Expect = 0.13
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +3
Query: 162 DLFIAVKSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEF 341
++ + S +F R+AIRKT+ K + + F +G+ ++ + RE +
Sbjct: 80 EILLIATSRPDDFSRRNAIRKTWMNQKT--NQITSFFMVGLSSKTDEKVRDIVMREAELY 137
Query: 342 RDIIQMDFRD 371
RDI+ D
Sbjct: 138 RDIVVTSLED 147
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 21 FDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRAVSKIDLF 170
+D P+N +I P + V+ P + P RFL G+ R + + F
Sbjct: 440 YDIPVNTEIIPALGAVLFDPNVFESPKQFKPERFLDEEGKYRVMEEFRPF 489
>U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform a protein.
Length = 572
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 21 FDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRAVSKIDLF 170
+D P+N +I P + V+ P + P RFL G+ R + + F
Sbjct: 455 YDIPVNTEIIPALGAVLFDPNVFESPKQFKPERFLDEEGKYRVMEEFRPF 504
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 21 FDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRAVSKIDLF 170
+D P+N +I P + V+ P + P RFL G+ R + + F
Sbjct: 440 YDIPVNTEIIPALGAVLFDPNVFESPKQFKPERFLDEEGKYRVMEEFRPF 489
>AL110485-25|CAB60373.1| 672|Caenorhabditis elegans Hypothetical
protein Y46G5A.31 protein.
Length = 672
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 177 VKSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGVDGSPKSN 305
+++AM+ F D R YGR IEG LF LG G+ K N
Sbjct: 104 IRAAMKRFQ-ADGFRCMYGRWLIEGYPKVILFDLG-SGAVKMN 144
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 27.5 bits (58), Expect = 4.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 21 FDYPLNIDIKPLVRDVIAGRKPTVDPINY 107
F++ + D++PL++ V+ VD +NY
Sbjct: 538 FEFVRSEDVRPLIKYVVENHMEVVDSVNY 566
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 27.5 bits (58), Expect = 4.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 21 FDYPLNIDIKPLVRDVIAGRKPTVDPINY 107
F++ + D++PL++ V+ VD +NY
Sbjct: 774 FEFVRSEDVRPLIKYVVENHMEVVDSVNY 802
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 27.5 bits (58), Expect = 4.9
Identities = 22/88 (25%), Positives = 37/88 (42%)
Frame = +3
Query: 15 DNFDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRAVSKIDLFIAVKSAMR 194
+NF+ + I++ P+V VI KP D I S +I + VKS +
Sbjct: 859 NNFNLRIGINVGPVVAGVIGSDKPHYD-IWGNSVNVASRMDSGGVAGRIQVTEEVKSILE 917
Query: 195 NFDHRDAIRKTYGRAKIEGRNVKTLFFL 278
+ R G+ ++G+ + FFL
Sbjct: 918 PLGYNFECR---GQINVKGKGMMETFFL 942
>Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 27.1 bits (57), Expect = 6.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 171 IAVKSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEFRDI 350
+ ++S + D+R+ IR+T+ + V+TL + + N +I E ++RDI
Sbjct: 113 LVIRSGPGSLDYRNFIRRTWKQ------QVETLVPVVFVCATSKNDTLKI--EANKYRDI 164
Query: 351 IQMDFRD 371
+Q DF D
Sbjct: 165 LQFDFED 171
>Z71178-12|CAD44086.1| 342|Caenorhabditis elegans Hypothetical
protein B0024.15 protein.
Length = 342
Score = 27.1 bits (57), Expect = 6.5
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +3
Query: 108 YPYRFLS-NSGECRAVSKIDLFIAVKSAMRNFDHRDAIRKTYGRAK----IEGRNVKTLF 272
+ Y+F++ +C +K+ I + S NFD R AIR+T+ + +V+ F
Sbjct: 67 HTYQFITVPKKQCSNNTKLQ--ITILSTAGNFDIRQAIRETWANPNNSEHVANNDVRISF 124
Query: 273 FLGVDGSPKSNIQKRIDREMGEFRDIIQMD 362
+ + N + +E+ +F D+I D
Sbjct: 125 IISKTSNEFLNF--ALQKEIEKFDDMIVTD 152
>AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 27.1 bits (57), Expect = 6.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 171 IAVKSAMRNFDHRDAIRKTYGRAKIEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEFRDI 350
+ ++S + D+R+ IR+T+ + V+TL + + N +I E ++RDI
Sbjct: 113 LVIRSGPGSLDYRNFIRRTWKQ------QVETLVPVVFVCATSKNDTLKI--EANKYRDI 164
Query: 351 IQMDFRD 371
+Q DF D
Sbjct: 165 LQFDFED 171
>Z81564-8|CAB04571.1| 140|Caenorhabditis elegans Hypothetical
protein K05C4.8 protein.
Length = 140
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 248 LNLGAAVSLSYSVSVIKVPHCGFNS 174
LN G+ +SL+ S+S P C FNS
Sbjct: 29 LNCGSPMSLAVSISWAVGPTCAFNS 53
>Z69661-1|CAA93493.1| 253|Caenorhabditis elegans Hypothetical
protein F48F7.3 protein.
Length = 253
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 219 RKTYGRAKIEGRNVKTLFFLGVDGSPKSNIQKRIDREMGEFRDIIQMDFRD 371
R+ +G A + N F +G D I ID E+ + DIIQ+D +
Sbjct: 3 RENFGPAWLNENNAVMYFIVGTD------IDVDIDDEIKTYEDIIQVDINE 47
>AF039053-16|AAC25869.1| 497|Caenorhabditis elegans Cytochrome p450
family protein 33C1 protein.
Length = 497
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +3
Query: 15 DNFDYPLNIDIKPLVRDVIAGRKPTVDPINYYPYRFLSNSGECRAVSKIDLF 170
D F P + + V+ + DP + P RF+ +G+ + V ++ F
Sbjct: 385 DGFKIPKGTGVVAQISTVMNNEEVFPDPYTFNPDRFIDENGKLKKVDELAPF 436
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 417 PTERHHCFYSVYYSSYRENPFVLYP*IRPFP 325
P +RH C SV + +Y + +V+ + P P
Sbjct: 163 PLDRHECGVSVLFHTYFADEYVIKSDMEPLP 193
>AC006645-5|AAF39839.2| 105|Caenorhabditis elegans Hypothetical
protein F56A4.3 protein.
Length = 105
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 327 PCLYVSGY*ISVIRRRLRKIEFLHSYPQSWRGRKSFL*RLCDQSSSL 187
PCL V G I +R + +H Y W G K+ R+ D+SS++
Sbjct: 54 PCLKVDGQEIVQTGAIMRHLGRVHGYWSLWSGNKNG--RMPDRSSAV 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,931,044
Number of Sequences: 27780
Number of extensions: 167556
Number of successful extensions: 435
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -