Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E08
         (479 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069653-1|AAH69653.1|  605|Homo sapiens solute carrier family 2...    29   6.4  
AK096171-1|BAC04715.1|  352|Homo sapiens protein ( Homo sapiens ...    29   6.4  
AF520706-1|AAM76072.1|  558|Homo sapiens K-dependent Na/Ca excha...    29   6.4  
AF520705-1|AAM76071.1|  586|Homo sapiens K-dependent Na/Ca excha...    29   6.4  
AF520704-1|AAM76070.1|  605|Homo sapiens K-dependent Na/Ca excha...    29   6.4  

>BC069653-1|AAH69653.1|  605|Homo sapiens solute carrier family 24
           (sodium/potassium/calcium exchanger), member 4 protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 142 TLGAVILLTFIYLRDVIIFFSLLLFCNYFFLILFRIPDVKYNV 14
           T+  ++L+ FIY   ++ +  L+L   Y F IL     +KYNV
Sbjct: 194 TISVIVLIVFIYDEQIVWWEGLVLIILYVFYILI----MKYNV 232


>AK096171-1|BAC04715.1|  352|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38852 fis, clone MESAN2010312, weakly similar to
           Homo sapiens sodium/calcium exchanger NCKX3 (SLC24A3)
           mRNA. ).
          Length = 352

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 142 TLGAVILLTFIYLRDVIIFFSLLLFCNYFFLILFRIPDVKYNV 14
           T+  ++L+ FIY   ++ +  L+L   Y F IL     +KYNV
Sbjct: 63  TISVIVLIVFIYDEQIVWWEGLVLIILYVFYILI----MKYNV 101


>AF520706-1|AAM76072.1|  558|Homo sapiens K-dependent Na/Ca
           exchanger NCKX4 protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 142 TLGAVILLTFIYLRDVIIFFSLLLFCNYFFLILFRIPDVKYNV 14
           T+  ++L+ FIY   ++ +  L+L   Y F IL     +KYNV
Sbjct: 147 TISVIVLIVFIYDEQIVWWEGLVLIILYVFYILI----MKYNV 185


>AF520705-1|AAM76071.1|  586|Homo sapiens K-dependent Na/Ca
           exchanger NCKX4 protein.
          Length = 586

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 142 TLGAVILLTFIYLRDVIIFFSLLLFCNYFFLILFRIPDVKYNV 14
           T+  ++L+ FIY   ++ +  L+L   Y F IL     +KYNV
Sbjct: 194 TISVIVLIVFIYDEQIVWWEGLVLIILYVFYILI----MKYNV 232


>AF520704-1|AAM76070.1|  605|Homo sapiens K-dependent Na/Ca
           exchanger NCKX4 protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 142 TLGAVILLTFIYLRDVIIFFSLLLFCNYFFLILFRIPDVKYNV 14
           T+  ++L+ FIY   ++ +  L+L   Y F IL     +KYNV
Sbjct: 194 TISVIVLIVFIYDEQIVWWEGLVLIILYVFYILI----MKYNV 232


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,418,318
Number of Sequences: 237096
Number of extensions: 779157
Number of successful extensions: 1112
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)