Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E06
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    27   0.12 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   4.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.8  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 81  QPVSRTYQYRKVMKPMLERKRRARINRCLDELKELM 188
           +P ++  Q  +     LE+ RRA +  CL++LK L+
Sbjct: 40  RPKTKKSQGSRTTHNELEKNRRAHLRNCLEKLKVLV 75


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 568  FKPVHLWTAQPTLPSP 615
            F P + W   P +PSP
Sbjct: 1158 FTPFNFWNPPPFMPSP 1173


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 597 LCSPEVYRFELASEKLAATV 538
           +CSP++  F+L + KL   V
Sbjct: 155 MCSPKLLTFDLKTSKLVKQV 174


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 597 LCSPEVYRFELASEKLAATV 538
           +CSP+++ F+L + +L   V
Sbjct: 154 MCSPKLFAFDLNTSQLLKQV 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,629
Number of Sequences: 438
Number of extensions: 3578
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)