Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E05
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   3.8  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   5.0  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   5.0  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   8.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.7  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -1

Query: 448 LVEGHNLSEIVNESNE 401
           ++ G  L+EI+NE++E
Sbjct: 45  IINGKKLTEIINETHE 60


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 235 IIHFTLDEINCHVRVHIIIGFTDSHLDRIVFIHRVIT 125
           I+ F L  I C +       + D  +DRI+   R++T
Sbjct: 5   ILLFVLVTITCVIAEDYTTKYDDMDIDRILQNGRILT 41


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 235 IIHFTLDEINCHVRVHIIIGFTDSHLDRIVFIHRVIT 125
           I+ F L  I C +       + D  +DRI+   R++T
Sbjct: 5   ILLFVLVTITCVIAEDYTTKYDDMDIDRILQNGRILT 41


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 40  TRIPGVRYGPVASTPTRG 93
           T + GV Y PV  TP+ G
Sbjct: 838 TTMAGVIYPPVIGTPSTG 855


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/19 (36%), Positives = 16/19 (84%)
 Frame = +2

Query: 254 FKSTIKDALIKLNDLVDES 310
           FK+  ++ LIK++D+++E+
Sbjct: 221 FKNLPEETLIKISDVLEET 239


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 200 MTVDFVKGKMDN 235
           M+VDF+KG + N
Sbjct: 184 MSVDFIKGSISN 195


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +2

Query: 11  KWTRENMKIKPESPVSVMDPSLLLRPEEKYEDKPLEAFRDYTVD 142
           K   E++    +  +   DP + L  +E  E   L+  ++YT D
Sbjct: 178 KLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTAD 221


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +2

Query: 272  DALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMAFYEE 451
            D   KLN+ +D++D   N P +   F+  +        +D         DL     FYE+
Sbjct: 1383 DVRAKLNEYLDKADVIVNTPIMDAHFKDVKLSDFGFSTEDILDTAD--EDLLINNVFYED 1440

Query: 452  PQWCVVGDTFA 484
               C++  T A
Sbjct: 1441 ETSCMLDKTRA 1451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,318
Number of Sequences: 438
Number of extensions: 3597
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)