Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E05
         (574 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g14520.1 68414.m01721 oxygenase-related similar to myo-inosit...   137   4e-33
At5g56640.1 68418.m07071 expressed protein similar to myo-inosit...   125   2e-29
At2g19800.1 68415.m02313 expressed protein similar to myo-inosit...   124   4e-29
At4g26260.1 68417.m03779 expressed protein similar to myo-inosit...   122   1e-28
At1g11280.3 68414.m01295 S-locus protein kinase, putative simila...    30   1.3  
At2g19190.1 68415.m02239 light-responsive receptor protein kinas...    29   1.7  
At1g61380.1 68414.m06917 S-locus protein kinase, putative simila...    28   3.8  
At1g03760.1 68414.m00356 prefoldin subunit family protein contai...    28   3.8  
At5g21900.1 68418.m02539 expressed protein                             28   5.1  
At2g42955.1 68415.m05326 hypothetical protein                          28   5.1  
At1g29470.1 68414.m03605 dehydration-responsive protein-related ...    28   5.1  
At5g08240.1 68418.m00967 expressed protein                             27   6.7  
At2g04660.1 68415.m00475 E3 ubiquitin ligase, putative E3, ubiqu...    27   6.7  
At1g61390.1 68414.m06918 S-locus protein kinase, putative contai...    27   8.9  

>At1g14520.1 68414.m01721 oxygenase-related similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 311

 Score =  137 bits (332), Expect = 4e-33
 Identities = 71/145 (48%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
 Frame = +2

Query: 122 FRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLV 301
           FRDY  D     +  V + Y   H   TVDFV+   + + K N  + +I +    LN+ +
Sbjct: 51  FRDY--DAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFI 108

Query: 302 DESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVM---AFYEEPQWCVVG 472
           DESDPD + P I H  QTAE IR+D+PD+DW HL GLIHDLGKV+   +F E PQW VVG
Sbjct: 109 DESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVG 168

Query: 473 DTFAVGCKWGKSIVYGDDSFKYNPD 547
           DTF VGC + +SIV+    FK NPD
Sbjct: 169 DTFPVGCAFDESIVH-HKYFKENPD 192


>At5g56640.1 68418.m07071 expressed protein similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 314

 Score =  125 bits (301), Expect = 2e-29
 Identities = 74/176 (42%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
 Frame = +2

Query: 41  PESPVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVK 220
           P S +S  D  + L PE     +    FRDYT D N   +  V   Y   HTN T+DFV+
Sbjct: 30  PMSKIS-SDDEVFLAPEMNAFGRQ---FRDYT-DTNSERQKSVEHFYATQHTNQTLDFVQ 84

Query: 221 GKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFH 400
                + K +     I +      ++VDESDPD + P I H  Q+AE IR+D+P++DW H
Sbjct: 85  KMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLH 144

Query: 401 LIGLIHDLGKVMA---FYEEPQWCVVGDTFAVGCKWGKSIVYGDDSFKYNPDTYYP 559
           L  LIHDLGKV+    F   PQW VVGDTF VGC + +S V+    F  NPD   P
Sbjct: 145 LTALIHDLGKVLTLPQFGGLPQWAVVGDTFPVGCAFDESNVH-HKYFMENPDFNNP 199


>At2g19800.1 68415.m02313 expressed protein similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 317

 Score =  124 bits (299), Expect = 4e-29
 Identities = 67/150 (44%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
 Frame = +2

Query: 119 AFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDL 298
           +FRDY   E++  +  V + Y   H + T DFVK     + K N  + +I +    LN++
Sbjct: 55  SFRDYENGESER-QQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNV 113

Query: 299 VDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMAFYE---EPQWCVV 469
           VDESDPD + P I H  QTAE IR D+PD+DW HL  LIHDLGKV+   E    PQW VV
Sbjct: 114 VDESDPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVV 173

Query: 470 GDTFAVGCKWGKSIVYGDDSFKYNPDTYYP 559
           GDTF VGC +  + ++    FK N D   P
Sbjct: 174 GDTFPVGCTFDSANIH-HKYFKGNHDINNP 202


>At4g26260.1 68417.m03779 expressed protein similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 317

 Score =  122 bits (295), Expect = 1e-28
 Identities = 67/145 (46%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
 Frame = +2

Query: 122 FRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLV 301
           FRDY V+     +  V + Y   H N TVDFVK     + K +    +I +    LN++V
Sbjct: 57  FRDYDVESER--QKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVV 114

Query: 302 DESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMA---FYEEPQWCVVG 472
           DESDPD + P I H  Q+AE IR+D+P++DW HL  LIHDLGKV+    F   PQW VVG
Sbjct: 115 DESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVG 174

Query: 473 DTFAVGCKWGKSIVYGDDSFKYNPD 547
           DTF VGC + +S V+    F  NPD
Sbjct: 175 DTFPVGCAFDESNVH-HKYFVENPD 198


>At1g11280.3 68414.m01295 S-locus protein kinase, putative similar
           to receptor protein kinase [Ipomoea trifida]
           gi|836954|gb|AAC23542; contains protein kinase domain,
           Pfam:PF00069; contains S-locus glycoprotein family
           domain, Pfam:PF00954
          Length = 808

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +3

Query: 348 SRQRSGSVRTILTMIGSTSLDSFTI----SERLWPSTRSRNGAWSVTHSPSDVNGVNLLX 515
           S + +GS RT + ++GS SL  F I    S + W     +N +W     P +++G+    
Sbjct: 424 SSELAGSRRTKI-IVGSISLSIFVILAFGSYKYWRYRAKQNDSWKNGLEPQEISGLTFFE 482

Query: 516 TETTASNT 539
             T  + T
Sbjct: 483 MNTIRAAT 490


>At2g19190.1 68415.m02239 light-responsive receptor protein kinase /
           senescence-responsive receptor-like serine/threonine
           kinase, putative (SIRK) similar to light repressible
           receptor protein kinase [Arabidopsis thaliana]
           gi|1321686|emb|CAA66376; contains Pfam profiles PF00069:
           Protein kinase domain and PF00560: Leucine Rich Repeat
          Length = 876

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -1

Query: 571 VLYLRVIGVRIVFEAVVSVXNRFTPFTSDGECVTDHAPLRLLVEGHNLSEIVNESNEVEP 392
           ++ L V+G+ +V    +++  RF      G     + PL+        SE+VN +N  E 
Sbjct: 519 IIPLVVVGIIVVLLTALALFRRFKKKQQRGTLGERNGPLKTAKRYFKYSEVVNITNNFER 578

Query: 391 II 386
           +I
Sbjct: 579 VI 580


>At1g61380.1 68414.m06917 S-locus protein kinase, putative similar
           to KI domain interacting kinase 1 [Zea mays]
           gi|2735017|gb|AAB93834; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 805

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +3

Query: 348 SRQRSGSVRTILTMIGSTSLDSFTI----SERLWPSTRSRNGAWSVTHSPSDVNGVNLLX 515
           S + +GS R  + +  + SL  F I    +  LW     +N AW       DV+GVN   
Sbjct: 418 SSELAGSSRRKIIVGTTVSLSIFLILVFAAIMLWRYRAKQNDAWKNGFERQDVSGVNFFE 477

Query: 516 TET--TASN 536
             T  TA+N
Sbjct: 478 MHTIRTATN 486


>At1g03760.1 68414.m00356 prefoldin subunit family protein contains
           similarity to Swiss-Prot:O94763 RNA polymerase II
           subunit 5-mediating protein (RPB5-mediating protein)
           [Homo sapiens]; contains Pfam profile PF02996: Prefoldin
           subunit
          Length = 391

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +2

Query: 89  EEKYEDKPLEAFR-DYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKM 229
           EEK  +K +E  R    VDEND +   V+K    +H N+ V F  GKM
Sbjct: 27  EEKIGEKRVEMNRLQQYVDENDNLINLVKKLPDQLHHNVMVPF--GKM 72


>At5g21900.1 68418.m02539 expressed protein
          Length = 544

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 324 LVSGSDSSTKSFSLMRASFIVDLKWLNFNQLS 229
           LVS +D   +SF + R+S + DL   N N+++
Sbjct: 345 LVSVNDGVVRSFFMFRSSILTDLSLANCNEVT 376


>At2g42955.1 68415.m05326 hypothetical protein
          Length = 213

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 349 ESVHNVRQVSVRIGFIDQIVQLDESILYCRLEVVEFQPI 233
           +  HNVR       + DQ+V LD+ IL  +   V F+P+
Sbjct: 78  QEFHNVRSRPTHATYADQLVNLDDQILPWK---VHFRPV 113


>At1g29470.1 68414.m03605 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 770

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
 Frame = +2

Query: 41  PES-PVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVD-- 211
           PES P  V      L  +E    KP +   D+T D ++  K  V K+Y +    M +D  
Sbjct: 563 PESWPERVETVPQWLDSQEGVYGKPAQ--EDFTAD-HERWKTIVSKSYLN---GMGIDWS 616

Query: 212 FVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNI 337
           +V+  MD    +  F + +KD  + + ++V    PDT LP I
Sbjct: 617 YVRNVMDMRAVYGGFAAALKDLKLWVMNVVPIDSPDT-LPII 657


>At5g08240.1 68418.m00967 expressed protein 
          Length = 258

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 8   SKWTRENMKIKPESPVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDENDPI 157
           SK+  +N +IKP        P+  +  E   + KPL   R  T  +N P+
Sbjct: 58  SKFRLKNSEIKPSPIEETEKPTSRVEDETDDKQKPLSVIRRITDRKNIPV 107


>At2g04660.1 68415.m00475 E3 ubiquitin ligase, putative E3,
           ubiquitin ligase; contains similarity to
           anaphase-promoting complex subunit 2 GI:6180009 from
           [Homo sapiens]
          Length = 865

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +2

Query: 167 VRKTYYDMHTNM-TVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVH 343
           + KT YD+ T + TV+         LK +  +++++   I LNDL+D    +T   NI  
Sbjct: 566 LNKTDYDIDTEIRTVEL--------LKIHFGEASMQRCEIMLNDLIDSKRVNT---NIKK 614

Query: 344 AFQTAERIRED 376
           A QT   +RE+
Sbjct: 615 ASQTGAELREN 625


>At1g61390.1 68414.m06918 S-locus protein kinase, putative contains
           protein kinase domain, Pfam:PF00069; contains S-locus
           glycoprotein family domain, Pfam:PF00954
          Length = 831

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +3

Query: 450 SRNGAWSVTHSPSDVNGVNLLXTET--TASN 536
           S   AW+    P DV+GVNL    T  TA+N
Sbjct: 488 SSQDAWAKDMEPQDVSGVNLFDMHTIRTATN 518


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,108,389
Number of Sequences: 28952
Number of extensions: 279584
Number of successful extensions: 837
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)