Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E03
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.29 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   2.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.6  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 81  FCGVDFISSSNFGHSQFRN 25
           +  +D++SSS   HSQF N
Sbjct: 259 YSNMDYLSSSTMSHSQFGN 277


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 250 QIDLKHLLPHFPL*QILSISPHIRASIVFALLNLART 140
           + DLK L+ +FP         H++ S +F++LN   T
Sbjct: 277 KFDLKTLVLNFPKFTAGGFF-HVKKSTIFSILNTVST 312


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 236 TPSPAFSPVADSFDFSAY 183
           TPSP+ SP+A   +++++
Sbjct: 267 TPSPSASPLAYQHEYNSF 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.134    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,585
Number of Sequences: 336
Number of extensions: 2428
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)