Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_E03
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 58 4e-09
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049... 58 4e-09
10_08_0304 - 16640937-16642877 45 3e-05
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 44 5e-05
03_01_0298 + 2318836-2319051,2321238-2323106 44 7e-05
08_01_0178 - 1509100-1511214 44 9e-05
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653... 44 9e-05
04_04_0463 - 25397837-25399693,25402136-25402405 43 1e-04
10_08_0303 - 16638379-16640199 43 2e-04
10_08_0302 - 16626622-16626624,16626809-16628761,16631452-16631655 43 2e-04
02_05_1148 - 34458732-34460627,34462299-34462547 40 0.001
03_04_0007 + 16265360-16266982 36 0.024
08_01_0177 + 1504472-1505033,1505035-1506647 35 0.042
04_01_0006 - 112476-114182,114627-114676,115289-115463 34 0.056
11_04_0297 + 16050333-16050348,16050564-16052518 34 0.074
01_06_0025 - 25716563-25718332 33 0.097
03_06_0411 + 33741903-33742163,33742990-33743168,33743342-337434... 31 0.52
09_02_0168 - 5253588-5254688 31 0.69
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 4.8
06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053... 27 6.4
03_01_0510 + 3841630-3844089,3844235-3844358,3844641-3844786,384... 27 6.4
11_06_0168 + 20868696-20870072 27 8.5
05_02_0156 + 7163756-7163834,7165447-7166225 27 8.5
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 58.0 bits (134), Expect = 4e-09
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +1
Query: 349 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 477
K VVFV+DTSGSM G +E +K AM T L+EL GDYF+II F
Sbjct: 333 KAVVFVIDTSGSMQGHPLENVKNAMSTALSELTEGDYFNIITF 375
>03_04_0020 -
16504322-16504654,16504758-16504785,16504937-16504989,
16505377-16505463,16505636-16505704,16506071-16506145,
16507040-16507210,16507693-16507793,16508062-16508139,
16508492-16508648,16508737-16509006,16509369-16509485,
16510250-16510339,16510417-16510629,16510742-16510891,
16511929-16512342
Length = 801
Score = 58.0 bits (134), Expect = 4e-09
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +1
Query: 358 VFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 477
VF++DTSGSM G+ +E +K AMYT L+EL GDYF+II F
Sbjct: 335 VFIIDTSGSMQGKPLESVKNAMYTTLSELVQGDYFNIITF 374
>10_08_0304 - 16640937-16642877
Length = 646
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
+V VLD SGSM G K+ LK+AM +++ L PGD +I F S
Sbjct: 176 LVTVLDVSGSMVGNKLALLKQAMGFVIDNLGPGDRLCVISFSS 218
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
+V V+D SGSM G K+E +K+A+ ++ +L P D SI+ FES
Sbjct: 63 LVAVVDVSGSMRGHKIESVKKALQFVIMKLTPVDRLSIVTFES 105
>03_01_0298 + 2318836-2319051,2321238-2323106
Length = 694
Score = 44.0 bits (99), Expect = 7e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
+V VLD SGSMSG K+ LK AM ++ L P D S++ F S
Sbjct: 248 LVTVLDVSGSMSGIKLSLLKRAMSFVIQTLGPNDRLSVVAFSS 290
>08_01_0178 - 1509100-1511214
Length = 704
Score = 43.6 bits (98), Expect = 9e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 477
+V VLD SGSM G K+ LK AM ++++L PGD +++ F
Sbjct: 233 LVTVLDVSGSMEGYKLTLLKRAMGFVIDKLGPGDRLAVVSF 273
>02_04_0640 -
24664841-24664855,24664895-24664978,24665232-24665319,
24665457-24667318
Length = 682
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
+V VLD SGSM+G K+ LK AM ++ L P D S+I F S
Sbjct: 179 LVTVLDVSGSMAGTKLALLKRAMGFVIQHLGPSDRLSVIAFSS 221
>04_04_0463 - 25397837-25399693,25402136-25402405
Length = 708
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
+V VLD SGSM+G K+ LK AM ++ L P D S+I F S
Sbjct: 276 LVTVLDVSGSMAGTKLALLKRAMGFVVQHLGPSDRLSVIAFSS 318
>10_08_0303 - 16638379-16640199
Length = 606
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
+V VLD SGSM+GRK+ +K+AM +++ L P D ++ F +
Sbjct: 145 LVTVLDVSGSMAGRKLALVKKAMGFVIDNLGPADRLCVVSFST 187
>10_08_0302 - 16626622-16626624,16626809-16628761,16631452-16631655
Length = 719
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
+V VLD S SM+G K+ LK AM ++ L PGD S++ F S
Sbjct: 262 LVTVLDVSWSMAGTKLALLKRAMSFVIQALGPGDRLSVVTFSS 304
>02_05_1148 - 34458732-34460627,34462299-34462547
Length = 714
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
++ VLD SGSM+G K+ LK AM ++ L D S+I F S
Sbjct: 274 LITVLDVSGSMAGTKLALLKRAMGFVIQNLGSSDRLSVIAFSS 316
>03_04_0007 + 16265360-16266982
Length = 540
Score = 35.5 bits (78), Expect = 0.024
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 483
++ VLD S SM+G K++++K A+ ++ +L D SI+ F +
Sbjct: 71 LIAVLDVSTSMAGNKLDRMKAALLFVIRKLADVDRLSIVTFSN 113
>08_01_0177 + 1504472-1505033,1505035-1506647
Length = 724
Score = 34.7 bits (76), Expect = 0.042
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 477
+V VLD SGSM G K+ LK AM L PGD +++ F
Sbjct: 292 LVTVLDVSGSMEGYKLALLKRAM----GLLGPGDRLAVVSF 328
>04_01_0006 - 112476-114182,114627-114676,115289-115463
Length = 643
Score = 34.3 bits (75), Expect = 0.056
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 477
+V VLD S M G K+ LK M ++ L P D +I+ F
Sbjct: 234 LVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAF 274
>11_04_0297 + 16050333-16050348,16050564-16052518
Length = 656
Score = 33.9 bits (74), Expect = 0.074
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Frame = +1
Query: 190 EKSKESATGENAGEGVLGQ---FVVQYDVDRPKDGQILVNDGYFVHFFAPDLPPLNKY-- 354
EK K N EG LG+ F ++Y +D P V G H F PD + Y
Sbjct: 413 EKKKMQQMRSNGWEGFLGKVTSFCIKYSIDIPAMDAKYVPHGRS-HRFYPDQTIDDHYRR 471
Query: 355 --VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESII 489
+ V+D + +++ A+ ++ NP D F+ D + I+
Sbjct: 472 EVYIGVIDRIHQELENRFDEVSMALLLCMSAFNPTDSFASFDAQKIL 518
>01_06_0025 - 25716563-25718332
Length = 589
Score = 33.5 bits (73), Expect = 0.097
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDF 477
+V V+D SGSM G +++++K A+ ++ +L+ D I+ F
Sbjct: 70 LVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTF 110
>03_06_0411 +
33741903-33742163,33742990-33743168,33743342-33743426,
33743506-33743822,33743983-33744106,33744810-33744902,
33745296-33745364,33745654-33745704,33745705-33745854,
33745904-33746125,33746413-33746568,33746716-33746823,
33746992-33747126,33747209-33747364,33747544-33747664,
33748182-33748267
Length = 770
Score = 31.1 bits (67), Expect = 0.52
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 355 VVFVLDTSGSMSGRKMEQLKEAMYTILNE-LNPGDYFSIIDF 477
V+FV+D SGSM+ +M+ K A +L E D SII F
Sbjct: 570 VIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQVSIIPF 611
>09_02_0168 - 5253588-5254688
Length = 366
Score = 30.7 bits (66), Expect = 0.69
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Frame = +1
Query: 172 LMHVYAEKSKESATGENAGEGVLGQFVVQYDVDRP----KDGQILV-----NDGYFVHFF 324
++ + K+ E ATGE E + Q VVQ +RP K+ + +G VH
Sbjct: 197 MLSLMKRKALEVATGEVTTEEIGSQEVVQEVAERPAAKEKEPEFAAFGAREEEGSEVH-- 254
Query: 325 APDLPPLNKYVVFVLDTSGSMSGRKMEQLKEAM 423
+P L + V++ +G + G + E++KE++
Sbjct: 255 SPQEEQLEEMPADVMEGNGGLGGGRQERIKESL 287
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 443 SSFNIVYIASFNCSILRPDMDPDVSRTKTTYLLSGGRSGA 324
+S N+V +A NC IL D+ P + + LS G S A
Sbjct: 485 NSNNLVVLAKSNCDILANDIGPSSCAIENSVHLSVGTSHA 524
>06_03_0507 +
21603472-21603750,21604371-21604463,21605046-21605372,
21605588-21605863,21606095-21607114
Length = 664
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 174 DARICGEIERICYRGKCGRRCFRSICCTI 260
D ++C + E+ R +CG C RS C +
Sbjct: 268 DQKMCSDQEKCLRRSECGPYCPRSQCAPV 296
>03_01_0510 +
3841630-3844089,3844235-3844358,3844641-3844786,
3844861-3844958,3845313-3845502
Length = 1005
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 46 EIRTGNEVDATKDDAQMSNVIIQREGTSAV 135
E TGN+++ T D+ Q ++ ++EGT A+
Sbjct: 474 ERATGNQLEPTGDEDQEGMILDKKEGTVAI 503
>11_06_0168 + 20868696-20870072
Length = 458
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 68 TSFPVLISGTRNSEIFAVSLI 6
T FP L+S T+N+ IF V +
Sbjct: 338 TGFPALVSNTQNTRIFRVDTV 358
>05_02_0156 + 7163756-7163834,7165447-7166225
Length = 285
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = -1
Query: 379 RTCPGRRRRIC*AA--VGQERRNGRNIHRSLEFVHLSV---DLHHIVQQID 242
R PGRRR C AA G+ ++ ++ +EF S+ D+H + ++D
Sbjct: 131 RRLPGRRRHECEAAPLAGEAKQCATSLESMVEFAASSLGTRDVHAVSTEVD 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.134 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,923,235
Number of Sequences: 37544
Number of extensions: 265605
Number of successful extensions: 735
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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