Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_E02
(555 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023382-1|AAY55798.1| 265|Drosophila melanogaster IP10372p pro... 29 4.2
BT023334-1|AAY55750.1| 265|Drosophila melanogaster IP10172p pro... 29 4.2
AE014297-1054|AAF54463.2| 265|Drosophila melanogaster CG9459-PA... 29 4.2
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 28 9.7
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 28 9.7
BT023753-1|AAZ41761.1| 398|Drosophila melanogaster RE63826p pro... 28 9.7
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 28 9.7
AY052004-1|AAK93428.1| 398|Drosophila melanogaster LD46938p pro... 28 9.7
AY051900-1|AAK93324.1| 661|Drosophila melanogaster LD38872p pro... 28 9.7
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 28 9.7
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 28 9.7
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 28 9.7
AE014297-3222|AAF56052.2| 398|Drosophila melanogaster CG4813-PA... 28 9.7
AE013599-2363|AAM70893.2| 716|Drosophila melanogaster CG8912-PA... 28 9.7
AE013599-2362|AAS64831.1| 797|Drosophila melanogaster CG8912-PC... 28 9.7
AE013599-2361|AAF57942.2| 796|Drosophila melanogaster CG8912-PB... 28 9.7
>BT023382-1|AAY55798.1| 265|Drosophila melanogaster IP10372p
protein.
Length = 265
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 437 HEHDTWR----HLWYFHPVVVGSETVFFIFNRNYNQ 532
HE+ W + ++F+ ++ ETVFFIF + Y Q
Sbjct: 99 HEYKNWERWLSYSYFFNKLMDLLETVFFIFRKKYRQ 134
>BT023334-1|AAY55750.1| 265|Drosophila melanogaster IP10172p
protein.
Length = 265
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 437 HEHDTWR----HLWYFHPVVVGSETVFFIFNRNYNQ 532
HE+ W + ++F+ ++ ETVFFIF + Y Q
Sbjct: 99 HEYKNWERWLSYSYFFNKLMDLLETVFFIFRKKYRQ 134
>AE014297-1054|AAF54463.2| 265|Drosophila melanogaster CG9459-PA
protein.
Length = 265
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 437 HEHDTWR----HLWYFHPVVVGSETVFFIFNRNYNQ 532
HE+ W + ++F+ ++ ETVFFIF + Y Q
Sbjct: 99 HEYKNWERWLSYSYFFNKLMDLLETVFFIFRKKYRQ 134
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 160 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 267
++F LG Q KFI D NA +WG R RG
Sbjct: 135 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 160 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 267
++F LG Q KFI D NA +WG R RG
Sbjct: 19 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 54
>BT023753-1|AAZ41761.1| 398|Drosophila melanogaster RE63826p
protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 441 SCPPNALCSPSLSEFDSSFKYCPNCLFHNF 352
+ PP A +PS++ +SS CP C HNF
Sbjct: 118 AAPPPAAATPSVAAAESSQPTCPVC-NHNF 146
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 160 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 267
++F LG Q KFI D NA +WG R RG
Sbjct: 135 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170
>AY052004-1|AAK93428.1| 398|Drosophila melanogaster LD46938p
protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 441 SCPPNALCSPSLSEFDSSFKYCPNCLFHNF 352
+ PP A +PS++ +SS CP C HNF
Sbjct: 118 AAPPPAAATPSVAAAESSQPTCPVC-NHNF 146
>AY051900-1|AAK93324.1| 661|Drosophila melanogaster LD38872p
protein.
Length = 661
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 314 K*SLIGGTRGRTLKLWNKQFGQYLKLESNSDSDGEHKAF 430
K ++ G G T+KL N+Q G + +++ N+ + K F
Sbjct: 301 KCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLF 339
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 160 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 267
++F LG Q KFI D NA +WG R RG
Sbjct: 135 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 160 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 267
++F LG Q KFI D NA +WG R RG
Sbjct: 97 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 132
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 160 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 267
++F LG Q KFI D NA +WG R RG
Sbjct: 135 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170
>AE014297-3222|AAF56052.2| 398|Drosophila melanogaster CG4813-PA
protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 441 SCPPNALCSPSLSEFDSSFKYCPNCLFHNF 352
+ PP A +PS++ +SS CP C HNF
Sbjct: 118 AAPPPAAATPSVAAAESSQPTCPVC-NHNF 146
>AE013599-2363|AAM70893.2| 716|Drosophila melanogaster CG8912-PA,
isoform A protein.
Length = 716
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 314 K*SLIGGTRGRTLKLWNKQFGQYLKLESNSDSDGEHKAF 430
K ++ G G T+KL N+Q G + +++ N+ + K F
Sbjct: 357 KCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLF 395
>AE013599-2362|AAS64831.1| 797|Drosophila melanogaster CG8912-PC,
isoform C protein.
Length = 797
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 314 K*SLIGGTRGRTLKLWNKQFGQYLKLESNSDSDGEHKAF 430
K ++ G G T+KL N+Q G + +++ N+ + K F
Sbjct: 437 KCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLF 475
>AE013599-2361|AAF57942.2| 796|Drosophila melanogaster CG8912-PB,
isoform B protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 314 K*SLIGGTRGRTLKLWNKQFGQYLKLESNSDSDGEHKAF 430
K ++ G G T+KL N+Q G + +++ N+ + K F
Sbjct: 437 KCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLF 475
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,764,116
Number of Sequences: 53049
Number of extensions: 527071
Number of successful extensions: 1480
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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