Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_E02
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88308-2|AAM15557.1|  313|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U88308-1|AAB42324.2|  461|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical ...    29   1.7  
AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical ...    29   1.7  
AF003130-14|AAB54129.1|  892|Caenorhabditis elegans Hypothetical...    28   3.9  
Z96048-3|CAB09418.1|  733|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U29244-5|AAC71090.1|  378|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AL021474-1|CAA16308.1|  343|Caenorhabditis elegans Hypothetical ...    27   9.1  

>U88308-2|AAM15557.1|  313|Caenorhabditis elegans Hypothetical
           protein C32E8.6b protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/63 (22%), Positives = 30/63 (47%)
 Frame = -1

Query: 420 CSPSLSEFDSSFKYCPNCLFHNFKVRPLVPPMRDYFPRHSITLPFVFVTVRTSIAISVCT 241
           C+  ++E  +  ++  NC  +   V  LVPP+ ++F  H +   +    ++T    +  +
Sbjct: 217 CTVLINERWNEHEFLANCQNYKVSVLFLVPPVLNFFANHPLVSSYDLSALKTIYVGAAAS 276

Query: 240 PFE 232
           P E
Sbjct: 277 PPE 279


>U88308-1|AAB42324.2|  461|Caenorhabditis elegans Hypothetical
           protein C32E8.6a protein.
          Length = 461

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/63 (22%), Positives = 30/63 (47%)
 Frame = -1

Query: 420 CSPSLSEFDSSFKYCPNCLFHNFKVRPLVPPMRDYFPRHSITLPFVFVTVRTSIAISVCT 241
           C+  ++E  +  ++  NC  +   V  LVPP+ ++F  H +   +    ++T    +  +
Sbjct: 217 CTVLINERWNEHEFLANCQNYKVSVLFLVPPVLNFFANHPLVSSYDLSALKTIYVGAAAS 276

Query: 240 PFE 232
           P E
Sbjct: 277 PPE 279


>AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2b protein.
          Length = 700

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 474 WKYHRCLHVSCSCPPNALCSPSL 406
           WK  +C H+   CPP  LC P+L
Sbjct: 281 WKCAKCAHMGTPCPPCVLC-PAL 302


>AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2a protein.
          Length = 741

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 474 WKYHRCLHVSCSCPPNALCSPSL 406
           WK  +C H+   CPP  LC P+L
Sbjct: 322 WKCAKCAHMGTPCPPCVLC-PAL 343


>AF003130-14|AAB54129.1|  892|Caenorhabditis elegans Hypothetical
           protein F55A12.1 protein.
          Length = 892

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/73 (24%), Positives = 35/73 (47%)
 Frame = +2

Query: 227 LNSNGVQTEMAIEVRTVTKTNGRVIECLGK*SLIGGTRGRTLKLWNKQFGQYLKLESNSD 406
           +N++ ++T   I +      N  +   L   +L   T  + +++ N+++ Q+L+L  N  
Sbjct: 154 INNDDLKTLPCISLEIYAPRNNSIT--LSAENLSKRTADQNIEVNNREYTQFLELALNQH 211

Query: 407 SDGEHKAFGGHEH 445
              E K FG  EH
Sbjct: 212 CVRETKRFGCFEH 224


>Z96048-3|CAB09418.1|  733|Caenorhabditis elegans Hypothetical
           protein F57A10.3 protein.
          Length = 733

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +1

Query: 46  VIRLVVNKLLAESKRNVVDYAYKL 117
           ++R+ +NKLLA SK+ V+  A++L
Sbjct: 659 LVRIALNKLLANSKQTVMIIAHRL 682


>U29244-5|AAC71090.1|  378|Caenorhabditis elegans Hypothetical
           protein ZK1248.9 protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 335 TRGRTLKLWNKQFGQYLKLESNSDSDGEHKAFGGHEH 445
           T  + +++ N+++ Q+L+L  N     E K FG  EH
Sbjct: 198 TADQNIEVNNREYTQFLELALNQHCTRETKRFGCFEH 234


>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical protein
            F26C11.3 protein.
          Length = 1317

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/53 (20%), Positives = 27/53 (50%)
 Frame = -2

Query: 548  TQASTPGCSFC*K*RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLIL 390
            T +   GC      +TP+    P GG+T  +    + + ++L  +++C ++++
Sbjct: 1058 TTSDAQGCKATSTTQTPTTFNWPTGGTTRTLPSGEIILSESLIAYKNCTTVLM 1110


>AL021474-1|CAA16308.1|  343|Caenorhabditis elegans Hypothetical
           protein Y32F6A.1 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/56 (21%), Positives = 28/56 (50%)
 Frame = -1

Query: 366 LFHNFKVRPLVPPMRDYFPRHSITLPFVFVTVRTSIAISVCTPFEFKSICISEIDK 199
           + HN +++  +   R+      +TLP  + +  +S  I    P++  ++CI E ++
Sbjct: 275 VIHNQRMQLFISAQRNILMGEELTLPHDYDSNYSSKVIQCAHPYQPHNVCIHEKER 330


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,884,729
Number of Sequences: 27780
Number of extensions: 274108
Number of successful extensions: 911
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)