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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D24
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    43   2e-04
U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    43   2e-04
U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein ...    43   2e-04
AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or cys...    43   2e-04
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    43   2e-04
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    43   2e-04
U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    43   2e-04
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    43   2e-04
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    42   3e-04
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    42   3e-04
AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or cys...    40   0.002
AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin prote...    40   0.002
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    37   0.014
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    37   0.014
U41746-6|AAA83333.1|  388|Caenorhabditis elegans Mediator protei...    31   0.69 
Z83238-11|CAE11318.1|  326|Caenorhabditis elegans Hypothetical p...    29   2.8  
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ...    28   6.4  
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport...    28   6.4  

>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
 Frame = +2

Query: 101 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 277
           L +S  DF  GL+ + N      F  S LS    LS +   A  ET D+I   L +    
Sbjct: 4   LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61

Query: 278 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXX 454
               + + NI   +   + G  ++ +  +F  +   + + +  DV+    +    L +  
Sbjct: 62  EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121

Query: 455 XXXXXXXINDFVRSATHEAFDEIVTPSELDGVLL-VLIDALYFKGHWK 595
                  IN+FVR  T +   +I+    ++  L+ VL +ALYFK  W+
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169


>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
 Frame = +2

Query: 101 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 277
           L +S  DF  GL+ + N      F  S LS    LS +   A  ET D+I   L +    
Sbjct: 4   LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61

Query: 278 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXX 454
               + + NI   +   + G  ++ +  +F  +   + + +  DV+    +    L +  
Sbjct: 62  EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121

Query: 455 XXXXXXXINDFVRSATHEAFDEIVTPSELDGVLL-VLIDALYFKGHWK 595
                  IN+FVR  T +   +I+    ++  L+ VL +ALYFK  W+
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169


>U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein 7,
           isoform c protein.
          Length = 365

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
 Frame = +2

Query: 101 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 277
           L +S  DF  GL+ + N      F  S LS    LS +   A  ET D+I   L +    
Sbjct: 4   LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61

Query: 278 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXX 454
               + + NI   +   + G  ++ +  +F  +   + + +  DV+    +    L +  
Sbjct: 62  EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121

Query: 455 XXXXXXXINDFVRSATHEAFDEIVTPSELDGVLL-VLIDALYFKGHWK 595
                  IN+FVR  T +   +I+    ++  L+ VL +ALYFK  W+
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169


>AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 365

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
 Frame = +2

Query: 101 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 277
           L +S  DF  GL+ + N      F  S LS    LS +   A  ET D+I   L +    
Sbjct: 4   LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61

Query: 278 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXX 454
               + + NI   +   + G  ++ +  +F  +   + + +  DV+    +    L +  
Sbjct: 62  EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121

Query: 455 XXXXXXXINDFVRSATHEAFDEIVTPSELDGVLL-VLIDALYFKGHWK 595
                  IN+FVR  T +   +I+    ++  L+ VL +ALYFK  W+
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
 Frame = +2

Query: 101 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 277
           L +S  DF  GL+ + N      F  S LS    LS +   A  ET D+I   L +    
Sbjct: 4   LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61

Query: 278 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXX 454
               + + NI   +   + G  ++ +  +F  +   + + +  DV+    +    L +  
Sbjct: 62  EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121

Query: 455 XXXXXXXINDFVRSATHEAFDEIVTPSELDGVLL-VLIDALYFKGHWK 595
                  IN+FVR  T +   +I+    ++  L+ VL +ALYFK  W+
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
 Frame = +2

Query: 101 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 277
           L +S  DF  GL+ + N      F  S LS    LS +   A  ET D+I   L +    
Sbjct: 4   LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61

Query: 278 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXX 454
               + + NI   +   + G  ++ +  +F  +   + + +  DV+    +    L +  
Sbjct: 62  EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121

Query: 455 XXXXXXXINDFVRSATHEAFDEIVTPSELDGVLL-VLIDALYFKGHWK 595
                  IN+FVR  T +   +I+    ++  L+ VL +ALYFK  W+
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169


>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
 Frame = +2

Query: 101 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEIN-TVLRLHPH 277
           L  S  DF   L+ + N  TES FV S LS    LS +   A  ET DEI   +L     
Sbjct: 13  LLHSETDFGLSLLRQQNL-TES-FVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATD 70

Query: 278 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXX 454
               + + NI   +   + G  +  +  +F      + + +  DV+    +   +L +  
Sbjct: 71  EELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFED 130

Query: 455 XXXXXXXINDFVRSATHEAFDEIVTPSELDGVLL-VLIDALYFKGHWK 595
                  IN+FV   T     +I+ P  +   L+ VL +A YFK +W+
Sbjct: 131 QEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQ 178


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
 Frame = +2

Query: 101 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEIN-TVLRLHPH 277
           L  S  DF   L+ + N  TES FV S LS    LS +   A  ET DEI   +L     
Sbjct: 13  LLHSETDFGLSLLRQQNL-TES-FVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATD 70

Query: 278 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXX 454
               + + NI   +   + G  +  +  +F      + + +  DV+    +   +L +  
Sbjct: 71  EELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFED 130

Query: 455 XXXXXXXINDFVRSATHEAFDEIVTPSELDGVLL-VLIDALYFKGHWK 595
                  IN+FV   T     +I+ P  +   L+ VL +A YFK +W+
Sbjct: 131 QEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQ 178


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 28/142 (19%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
 Frame = +2

Query: 173 VVSGLSAWAILSTLSFGAAEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDGGV-LEH 349
           V+S LS    L+ +  GA   T  E+  VL          ++  +++ +G  D GV  + 
Sbjct: 26  VLSPLSISLGLALIHAGACGSTQKELEDVLGGSR---IFEEFSGLMEAVGDTDNGVETKI 82

Query: 350 SGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXXXXXXXXXINDFVRSATHEAFDEIVT 529
              +F++    +++ + + V+    +    L +         +N FV + T+    +++ 
Sbjct: 83  VNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIP 142

Query: 530 PSELDGVLLVLIDALYFKGHWK 595
               +     L++A+YFK  W+
Sbjct: 143 ADSANNAFAFLVNAMYFKADWQ 164


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 28/142 (19%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
 Frame = +2

Query: 173 VVSGLSAWAILSTLSFGAAEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDGGV-LEH 349
           V+S LS    L+ +  GA   T  E+  VL          ++  +++ +G  D GV  + 
Sbjct: 26  VLSPLSISLGLALIHAGACGSTQKELEDVLGGSR---IFEEFSGLMEAVGDTDNGVETKI 82

Query: 350 SGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXXXXXXXXXINDFVRSATHEAFDEIVT 529
              +F++    +++ + + V+    +    L +         +N FV + T+    +++ 
Sbjct: 83  VNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIP 142

Query: 530 PSELDGVLLVLIDALYFKGHWK 595
               +     L++A+YFK  W+
Sbjct: 143 ADSANNAFAFLVNAMYFKADWQ 164


>AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 33/161 (20%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
 Frame = +2

Query: 122 FNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCF--NR 292
           F   L++ +  +  +  V S +S    L+ +  GA   T  +I N+V+       F  + 
Sbjct: 15  FGIKLLSDLTSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHF 74

Query: 293 KYFNILKEIGKNDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXXXXXXXX 472
            + N L     ND   L  +  +F+  +  + + F  +++    +E   + +        
Sbjct: 75  SFINKLLNSSVNDVETLI-ANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAK 133

Query: 473 XINDFVRSATHEAFDEIVTPSELDGVLLVLIDALYFKGHWK 595
            +N F+  +T     +++ P  L  V  +LI+A++F+G W+
Sbjct: 134 IMNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWR 174


>AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin protein
           1 protein.
          Length = 366

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 33/161 (20%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
 Frame = +2

Query: 122 FNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCF--NR 292
           F   L++ +  +  +  V S +S    L+ +  GA   T  +I N+V+       F  + 
Sbjct: 15  FGIKLLSDLTSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHF 74

Query: 293 KYFNILKEIGKNDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXXXXXXXX 472
            + N L     ND   L  +  +F+  +  + + F  +++    +E   + +        
Sbjct: 75  SFINKLLNSSVNDVETLI-ANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAK 133

Query: 473 XINDFVRSATHEAFDEIVTPSELDGVLLVLIDALYFKGHWK 595
            +N F+  +T     +++ P  L  V  +LI+A++F+G W+
Sbjct: 134 IMNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWR 174


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
 Frame = +2

Query: 173 VVSGLSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCFNRKYFNILKEIGKNDGGVLEH 349
           V S LS   +LS +  G    + D+I NT+L           +  + KE+     GV  +
Sbjct: 25  VFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKGVEVY 84

Query: 350 -SGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXXXXXXXXXINDFVRSATHEAFDEIV 526
            +  +++     V   F         ++   L           IN FV +AT+     I 
Sbjct: 85  LANKVYLKKGFTVNPTFLSTALKNYGADAKSLD-LTTPAAVQEINSFVNTATNGKIKNIA 143

Query: 527 TPSELDGVLLVLIDALYFKGHW 592
           T   +   + +LI+++YFK  W
Sbjct: 144 TQDSIKDAIALLINSIYFKADW 165


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
 Frame = +2

Query: 173 VVSGLSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCFNRKYFNILKEIGKNDGGVLEH 349
           V S LS   +LS +  G    + D+I NT+L           +  + KE+     GV  +
Sbjct: 25  VFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKGVEVY 84

Query: 350 -SGAMFIDSKINVYEQFKQDVQNTGVSEVYELPWXXXXXXXXXINDFVRSATHEAFDEIV 526
            +  +++     V   F         ++   L           IN FV +AT+     I 
Sbjct: 85  LANKVYLKKGFTVNPTFLSTALKNYGADAKSLD-LTTPAAVQEINSFVNTATNGKIKNIA 143

Query: 527 TPSELDGVLLVLIDALYFKGHW 592
           T   +   + +LI+++YFK  W
Sbjct: 144 TQDSIKDAIALLINSIYFKADW 165


>U41746-6|AAA83333.1|  388|Caenorhabditis elegans Mediator protein
           27 protein.
          Length = 388

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -3

Query: 538 FTRCYYFIKSFVSCRSNEIVYCSRGSRVIVPR*FINFRNSCIL 410
           F +C  +I+S+V+C S +  YC +  R  +P   +   +S I+
Sbjct: 335 FAQCNNYIQSYVNCFSTKCYYCKKHLRQFMPPTVVTRESSPII 377


>Z83238-11|CAE11318.1|  326|Caenorhabditis elegans Hypothetical
           protein T08G3.12 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 19/73 (26%), Positives = 33/73 (45%)
 Frame = -1

Query: 342 KTPPSFLPISFKILKYFLLKHTCGCSLSTVLISSKVSSAAPNDSVDRIAHADSPDTTKWL 163
           KTP +  P+ F IL   +       +LST+ I   + SAA   S   +A+   P + ++ 
Sbjct: 40  KTPKTLQPVKFSILVMHITCFWLDFNLSTLSIPYLIYSAAAGQSFGILAYLKIPMSFQFY 99

Query: 162 SVS*LTLVTSPAL 124
             +    +  PA+
Sbjct: 100 MGATAVFLLGPAI 112


>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
           related protein 2 protein.
          Length = 1272

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 227 AEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDG 334
           AEETF  I TV  L+ H     +++N L E+G+  G
Sbjct: 260 AEETFSSIRTVHSLNGHKRELDRFYNAL-EVGRQTG 294


>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
           PGP-2 protein.
          Length = 1272

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 227 AEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDG 334
           AEETF  I TV  L+ H     +++N L E+G+  G
Sbjct: 260 AEETFSSIRTVHSLNGHKRELDRFYNAL-EVGRQTG 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,447,379
Number of Sequences: 27780
Number of extensions: 264597
Number of successful extensions: 601
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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