Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D23
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   1.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   3.0  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   5.2  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   5.2  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 308 GSSCSNFRWNFVGTS 264
           G+ C N  W FVG S
Sbjct: 410 GTICENSAWGFVGNS 424


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 183 LHDIDCQIRKFN 148
           L D+DC +RK N
Sbjct: 77  LEDLDCSLRKLN 88


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 174 IDCQIRKFNELKEN 133
           I+C ++KFN + EN
Sbjct: 63  IECTMKKFNVVDEN 76


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 174 IDCQIRKFNELKEN 133
           ++C ++KFN + EN
Sbjct: 63  VECMMKKFNVVDEN 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,733
Number of Sequences: 438
Number of extensions: 2556
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)