Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D22
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.11 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   7.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -3

Query: 268 FYFNY*IILTHF*RCSYIFII*YCNRFYILANVYLKLYTYFNFLLMFLTIVK*YLHLV 95
           FY  + I   HF  C+Y F       F IL  VY   Y +  F +  L ++  Y  +V
Sbjct: 85  FYCPFIIFTVHFLLCTYYFYY----AFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138



 Score = 25.4 bits (53), Expect = 0.20
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 179 CKCLFKTVHIF*LFINVFDYCEIIFAPCIY 90
           C  +  T+H+  L    + YC +I   CIY
Sbjct: 270 CAFIIFTMHLLFLLCIYYFYCALIILLCIY 299



 Score = 25.0 bits (52), Expect = 0.26
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 179 CKCLFKTVHIF*LFINVFDY--CEIIFAPCIY 90
           C  +F  +H+  LF+   DY    ++F PCIY
Sbjct: 184 CAFIFFNMHL--LFLLCLDYFTLHLLFLPCIY 213



 Score = 23.0 bits (47), Expect = 1.0
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = -3

Query: 295 CVIVMLIK*FYFNY*IILTHF*RCSYIFII*YCNRFYILANVYLKLYTYFNFLLMFLTIV 116
           CV+++L+  +YF Y  IL       ++ ++     FY +  ++   +  F   L+FL  +
Sbjct: 230 CVLIILLCIYYFYYAFILF----TVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCI 285



 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 173 CLFKTVHIF*LF-INVFDYCEIIFAPCIY 90
           C++     F +F I++  YC +I   CIY
Sbjct: 211 CIYYFYSAFIIFTIHLLFYCVLIILLCIY 239


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 77 HAPKNFIYLKYL 42
          H+ KNF YLK L
Sbjct: 15 HSMKNFKYLKVL 26


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 240 HIFKGVVIYSLF 205
           H+F G+V YSL+
Sbjct: 508 HLFNGLVDYSLW 519


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,015
Number of Sequences: 336
Number of extensions: 1788
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)