Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D21
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81579-9|CAN99688.1|  225|Caenorhabditis elegans Hypothetical pr...    31   0.64 
AF101305-6|AAF98598.1|  506|Caenorhabditis elegans Udp-glucurono...    28   4.5  
AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical ...    27   7.9  

>Z81579-9|CAN99688.1|  225|Caenorhabditis elegans Hypothetical
           protein R13H4.2a protein.
          Length = 225

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 185 LTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRY 331
           L +D  ++ YYY+   +   ++ S RY    +     Y+N Y    TRY
Sbjct: 71  LYDDYWYDKYYYFSPLYRSTYYPSRRYSYSDYLPNPYYWNNYGSYWTRY 119


>AF101305-6|AAF98598.1|  506|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein63 protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
 Frame = +2

Query: 200 GFNSYYYYF-HSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTN-GLGSI-- 367
           GF+  Y  F  S+LPF   +    N  HR    Y  F   + T Y         L SI  
Sbjct: 175 GFSRNYATFVPSNLPFSMLNYTVSNYYHRVWAAYDWFGSFIFTAYVGNFAQKWALRSIIP 234

Query: 368 -PEFSW--YSPIKTGYYPLMTSYYFPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSPT 538
            P FS+  Y+   +  +  M    FP A R +++        E+ + LD+  KTF++ P 
Sbjct: 235 FPYFSFAEYNRRSSFTFTDMPDSLFPPASRTNDFFSFGAYCKESSKPLDLEFKTFIEHPK 294

Query: 539 ER 544
            +
Sbjct: 295 SK 296


>AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical
           protein K03H6.2 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 233 HLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYY 334
           HLPF +    +  + H R EI+YN    + + Y+
Sbjct: 264 HLPFQYELVDHDKMYHHRTEIWYNNDMSIGSSYH 297


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,828,548
Number of Sequences: 27780
Number of extensions: 290307
Number of successful extensions: 748
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)