Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D18
(336 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 53 1e-08
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 49 2e-07
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 38 5e-04
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 37 0.001
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 35 0.003
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 35 0.004
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 29 0.19
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 25 2.3
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 25 3.1
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 25 3.1
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 3.1
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 4.1
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 24 5.4
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 24 5.4
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 24 7.1
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 24 7.1
SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual 24 7.1
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 24 7.1
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 23 9.4
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 23 9.4
SPAC4G9.13c |vps26|pep8|retromer complex subunit Vps26|Schizosac... 23 9.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 23 9.4
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 52.8 bits (121), Expect = 1e-08
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 72 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMAN 200
+ D + K+ + + DKLVV+DF ATWCGPCK I PK ++ +N
Sbjct: 5 VSDSSEFKSIVCQ--DKLVVVDFFATWCGPCKAIAPKFEQFSN 45
Score = 37.5 bits (83), Expect = 5e-04
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +1
Query: 160 PAR*SGPNSTRWLTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
P + P ++ SD+ + KVDVD+ +IAAE ++AMP+F K ++ ++
Sbjct: 32 PCKAIAPKFEQFSNTYSDATFI-KVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIEEIV 88
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 49.2 bits (112), Expect = 2e-07
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3
Query: 72 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
++ F D TR+S DK+ V+DF A WCGPCK + P L++++ +
Sbjct: 22 VESFGDYNTRIS--ADKVTVVDFYADWCGPCKYLKPFLEKLSEQ 63
Score = 28.3 bits (60), Expect = 0.33
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 196 LTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
L++ + + V+ D+ DIA + + A+PT V + QE R++
Sbjct: 60 LSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIV 105
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 37.5 bits (83), Expect = 5e-04
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
DK++++ F A WCG CK + P+ + A+E+
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADEL 68
Score = 35.9 bits (79), Expect = 0.002
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 78 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
+FDD+ + E D V+++F A WCG CK + P +++A E
Sbjct: 364 NFDDIV--MDETKD--VLVEFYAPWCGHCKNLAPTYEKLAEE 401
Score = 27.9 bits (59), Expect = 0.44
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 211 DSIVVLKVDVDECEDIAAEYNINAMPTF-VYVKGDQ 315
D I +++VD E D+ +EY+I PT V+ G Q
Sbjct: 71 DGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQ 106
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 36.7 bits (81), Expect = 0.001
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 66 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEM 194
+ ++ ++L+ + A K +I+F ATWCG CK + P +E+
Sbjct: 23 VELQSLNELENTI-RASKKGALIEFYATWCGHCKSLAPVYEEL 64
Score = 30.3 bits (65), Expect = 0.082
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEM 194
K V+++F A WCG CK + P + +
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETL 183
Score = 29.5 bits (63), Expect = 0.14
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 211 DSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGD 312
+ +++ K+D D D+A +Y+I PT ++ D
Sbjct: 72 NDVLIGKIDADTHSDVADKYHITGFPTLIWFPPD 105
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.1 bits (77), Expect = 0.003
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 66 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
I I+ + + + ++G + +D A WCGPCK I P ++A++
Sbjct: 4 IEIRSYQHWISTIPKSG--YLAVDCYADWCGPCKAISPLFSQLASK 47
Score = 33.1 bits (72), Expect = 0.012
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 208 SDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQE 318
S V KV+VDE IA+ + AMPTFV+ + ++
Sbjct: 50 SPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQ 86
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 34.7 bits (76), Expect = 0.004
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 60 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
MS+ I + + L +++++++F A W PCK + D+ A +
Sbjct: 1 MSVEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKD 48
Score = 34.7 bits (76), Expect = 0.004
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 202 KLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRV 330
K + + V LK++ ++ DIA +++NA+P FV + G + R+
Sbjct: 47 KDTKNAVFLKIEAEKFSDIAESFDVNAVPLFVLIHGAKVLARI 89
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 29.1 bits (62), Expect = 0.19
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 114 GDKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
G LVV F A WCG CK + P ++A+ +
Sbjct: 49 GPSLVV--FYAPWCGYCKKLVPTYQKLASNL 77
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 25.4 bits (53), Expect = 2.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 152 PSRHEVNHDELVARLRQPGLQVIEVLDVDRHFVPLNRKTIK 30
PS + D++VA LRQ + + RH + ++R K
Sbjct: 335 PSSQNDSFDDVVACLRQKSTPYLSFIKKARHLIQVSRDKYK 375
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 25.0 bits (52), Expect = 3.1
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 105 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
SE I + CG CK +GP D M +
Sbjct: 38 SEVSKGTWFIKYYLPSCGACKRLGPMWDNMVEK 70
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 25.0 bits (52), Expect = 3.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 178 PNSTRWLTKLSDSIVVLKVDVDECE 252
PN T WL+ SD+ L D+DE +
Sbjct: 295 PNVTAWLSYNSDASYDLGPDIDEID 319
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -2
Query: 146 RHEVNHDELVARLRQPGLQVIEVLDVDRHFVPLNR 42
+H+++HDE R + +I+ + D + LNR
Sbjct: 641 KHDIHHDEKERRTTVDNVSIIDFNEEDTVYKMLNR 675
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 24.6 bits (51), Expect = 4.1
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = -2
Query: 149 SRHEVNHDELVARLRQPGLQVIEVLDVDRHFVPLNR 42
S++ NHD+ + + + + +++ +HF P+ R
Sbjct: 317 SKNNENHDQSENKEEEEDMMLTRPIEIPQHFSPIAR 352
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 24.2 bits (50), Expect = 5.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -1
Query: 135 QSRRACRPPPTAWSSSHRSP*C-GSTFCTFK*ENNKIDR 22
QS R CR PP +S + P G C + N +I R
Sbjct: 418 QSTRICRIPPETMASLYCGPEADGKYVCLYNGCNKRIAR 456
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 24.2 bits (50), Expect = 5.4
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 218 LLFLRSTLTNAKTSPPNITSTRCRLSCMLKATKK 319
LL L STL N + S N +RC S +LK+T K
Sbjct: 81 LLQLLSTLENLQLSQVNRIKSRCG-SKVLKSTTK 113
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 23.8 bits (49), Expect = 7.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 84 DDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMAN 200
D + RL EAG + +A CGPC + + D++A+
Sbjct: 433 DGITERLEEAGATV-----LANACGPCIGMWKRTDDIAS 466
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 23.8 bits (49), Expect = 7.1
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 194 HLVEFGP-DHLAGSAPSRHEVNHDELVARLRQPGLQVIEVLD 72
H E G DHLA + H +NH L+ ++ P LQ + LD
Sbjct: 602 HCGEAGDTDHLASAFLLSHGINHGILLRKV--PFLQYLWYLD 641
>SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 366
Score = 23.8 bits (49), Expect = 7.1
Identities = 6/26 (23%), Positives = 18/26 (69%)
Frame = +1
Query: 205 LSDSIVVLKVDVDECEDIAAEYNINA 282
+++++ + +D+DE + +EY +N+
Sbjct: 190 ITNTVPLTHIDLDEIRAVCSEYRVNS 215
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 81 FDDLKTRLSEAGDKL 125
+DDL +L+EAGD+L
Sbjct: 33 YDDLGNQLNEAGDEL 47
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 23.4 bits (48), Expect = 9.4
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -1
Query: 120 CRPPPTAWSSSHRSP*CGSTFC 55
CR P T + H CG FC
Sbjct: 179 CRTPFTFTNRKHHCRNCGGVFC 200
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 23.4 bits (48), Expect = 9.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 51 RYKMSIHIKDFDDLKTRLSEAGDKL 125
+YK+ H D + + RL+E D+L
Sbjct: 762 KYKLEKHEMDANQVNARLTEVQDRL 786
>SPAC4G9.13c |vps26|pep8|retromer complex subunit
Vps26|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 23.4 bits (48), Expect = 9.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 208 SDSIVVLKVDVDECEDIAAEYNIN 279
++S++ + V +DEC I EY+ N
Sbjct: 156 TNSLIRMDVGIDECLHIEFEYSKN 179
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 23.4 bits (48), Expect = 9.4
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = -3
Query: 214 SRTISLAISSSLGPIILQGPHQVAMKSITTSLS----PASDSLVFKSSK 80
S IS ISSS I++ P S TT+++ PA+++++ +SSK
Sbjct: 304 SPQISSTISSS--SFIVESPSVALSTSSTTTITNASTPAANTIISRSSK 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,341,879
Number of Sequences: 5004
Number of extensions: 23400
Number of successful extensions: 86
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 95984434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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