Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D18
(336 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 52 7e-08
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 49 7e-07
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 48 2e-06
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 47 3e-06
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 46 8e-06
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 45 1e-05
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 45 1e-05
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 44 2e-05
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 44 3e-05
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 44 3e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 44 3e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 44 3e-05
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 44 3e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 44 3e-05
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 43 4e-05
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 43 4e-05
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 42 8e-05
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 42 1e-04
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 42 1e-04
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 42 1e-04
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 42 1e-04
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 42 1e-04
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 41 2e-04
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 40 3e-04
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 38 0.001
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 38 0.002
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 38 0.002
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 37 0.004
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 36 0.005
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 36 0.009
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 36 0.009
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 36 0.009
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 35 0.012
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 35 0.012
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 35 0.016
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 35 0.016
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 35 0.016
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 33 0.047
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 33 0.047
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 33 0.047
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 33 0.047
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 32 0.083
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 32 0.083
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 31 0.14
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 31 0.14
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 31 0.19
At4g12170.1 68417.m01934 thioredoxin family protein similar to S... 30 0.44
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 29 0.58
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 29 1.0
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 29 1.0
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 29 1.0
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 29 1.0
At4g31240.2 68417.m04435 expressed protein 28 1.8
At4g31240.1 68417.m04434 expressed protein 28 1.8
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 27 2.4
At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-l... 27 3.1
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 27 3.1
At5g48120.1 68418.m05944 expressed protein low similarity to MMS... 27 4.1
At5g13390.1 68418.m01542 expressed protein 27 4.1
At4g27060.1 68417.m03891 expressed protein 27 4.1
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 27 4.1
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 27 4.1
At5g40150.1 68418.m04872 peroxidase, putative identical to perox... 26 5.4
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 26 5.4
At5g24190.1 68418.m02846 hypothetical protein 26 5.4
At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to cyto... 26 7.2
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 26 7.2
At2g28600.1 68415.m03476 expressed protein 26 7.2
At1g74360.1 68414.m08615 leucine-rich repeat transmembrane prote... 26 7.2
At1g29640.1 68414.m03623 expressed protein contains Pfam profile... 26 7.2
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 25 9.5
At3g03860.1 68416.m00398 expressed protein 25 9.5
At1g77670.1 68414.m09043 aminotransferase class I and II family ... 25 9.5
At1g69050.1 68414.m07901 expressed protein 25 9.5
At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containi... 25 9.5
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 52.4 bits (120), Expect = 7e-08
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +3
Query: 66 IHIKDFDDLKTRLSEAGD--KLVVIDFMATWCGPCKMIGPKLDEMA 197
+ IK+ + K+RL+ D KL+VI+F A WCGPCK + PKL+E+A
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELA 85
Score = 30.3 bits (65), Expect = 0.33
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 160 PAR*SGPNSTRWLTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
P + P K +D + +K+DVD + E+N++ +P V++K +E V+
Sbjct: 73 PCKTLEPKLEELAAKYTD-VEFVKIDVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVV 129
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 49.2 bits (112), Expect = 7e-07
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 66 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
I I + L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 96 IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 48.0 bits (109), Expect = 2e-06
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 78 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
D D + AGDK+VV+D WCGPCK+I PK E++ +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEK 125
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 47.2 bits (107), Expect = 3e-06
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +1
Query: 160 PAR*SGPNSTRWLTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
P R P K +D + +K+DVDE D+A E+N+ AMPTFV VK +E R++
Sbjct: 61 PCRMIEPAIHAMADKFND-VDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERII 117
Score = 45.2 bits (102), Expect = 1e-05
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEMANE 203
+KL+V+DF A+WCGPC+MI P + MA++
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAMADK 75
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 45.6 bits (103), Expect = 8e-06
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1
Query: 160 PAR*SGPNSTRWLTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
P R P + T+ S +V LKVD+D+ D+AA +NI+++PTF +++ +E +V+
Sbjct: 306 PCRYMSPLYSNLATQHS-RVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVV 362
Score = 44.4 bits (100), Expect = 2e-05
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +3
Query: 60 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEIVRL 215
+SIH + KT+ ++ +L+++ F ATWCGPC+ + P +A + R+
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRV 324
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 78 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPK---LDEMANEIVRL 215
D D + AG+KLVV+D WCGPCK+I PK L E +++V L
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFL 122
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 45.2 bits (102), Expect = 1e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 69 HIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEIV 209
H D ++ ++ +KL+VIDF A+WC PC+MI P +++A + +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFM 58
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +1
Query: 160 PAR*SGPNSTRWLTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQ 315
P R P K S + KVDVDE + +A E+ + AMPTFV++K +
Sbjct: 42 PCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGE 93
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 44.4 bits (100), Expect = 2e-05
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +3
Query: 108 EAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
+ +KL+VIDF A WCGPCK + P++ E+A++
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASK 71
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 160 PAR*SGPNSTRWLTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
P + P +K S+++ +VDVD D+A Y +P FV+VK +E RV+
Sbjct: 57 PCKAMEPRVREIASKYSEAVFA-RVDVDRLMDVAGTYRAITLPAFVFVKRGEEIDRVV 113
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 87 DLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
DL L AGDKLVV+DF + CG CK + PK+ ++A +
Sbjct: 103 DLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEK 141
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 81 FDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
FDDL + DK V++DF ATWCGPC+++ P L+E++ +
Sbjct: 68 FDDLL----QNSDKPVLVDFYATWCGPCQLMVPILNEVSETL 105
Score = 35.1 bits (77), Expect = 0.012
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 205 LSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVK 306
L D I V+K+D ++ +A +Y I A+PTF+ K
Sbjct: 105 LKDIIAVVKIDTEKYPSLANKYQIEALPTFILFK 138
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 43.6 bits (98), Expect = 3e-05
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 66 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
+ I ++ + LS AG++LV+++F TWC C+ + PKL + A E
Sbjct: 106 VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVE 151
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 43.6 bits (98), Expect = 3e-05
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 66 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
+ I ++ + LS AG++LV+++F TWC C+ + PKL + A E
Sbjct: 106 VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVE 151
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 60 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEIVRL 215
++ H + + K + + KL+VIDF A+WC PC+ I P EMA + +
Sbjct: 8 IACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNV 59
Score = 42.3 bits (95), Expect = 8e-05
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 196 LTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
+ K ++V K+DVDE + +A E+ + AMPTFV++K RV+
Sbjct: 52 MAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVV 97
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 43.6 bits (98), Expect = 3e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 72 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMA 197
I +L L+ AGDKLVV+DF + CG CK + PK+ + A
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFA 143
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 43.2 bits (97), Expect = 4e-05
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 72 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
++D+ + K + + KL+VIDF ATWC PC+ I P ++A +
Sbjct: 13 VEDWTE-KLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKK 55
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 196 LTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVK 306
L K +V KVDVDE +A E+ + AMPTF+++K
Sbjct: 52 LAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMK 88
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 43.2 bits (97), Expect = 4e-05
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEMANE 203
D+ V +DF A WCGPCKMI P ++E+A +
Sbjct: 92 DEPVFVDFWAPWCGPCKMIDPIVNELAQK 120
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 42.3 bits (95), Expect = 8e-05
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMA 197
VV+DF A WCGPCKMI P ++++A
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLA 124
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 66 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
I K+ D K ++ K+VV +F ATWCGPCK++ P E++ +
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEK 73
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 196 LTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
L++ S++ L VDVDE D ++ ++I A PTF ++K Q+ +++
Sbjct: 70 LSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLV 115
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 41.5 bits (93), Expect = 1e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 66 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMA 197
+ I+ + L L AGD+LVV+DF + CG CK + PK+ ++A
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLA 131
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = +3
Query: 93 KTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
+T++ E+ D V+++F A WCGPC+MI P +D++A +
Sbjct: 97 QTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKD 132
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 81 FDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
FD + L + DK V++D+ ATWCGPC+ + P L+E++ +
Sbjct: 70 FDSFEDLLVNS-DKPVLVDYYATWCGPCQFMVPILNEVSETL 110
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 205 LSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRR 327
L D I V+K+D ++ IA +Y I A+PTF+ K + R
Sbjct: 110 LKDKIQVVKIDTEKYPSIANKYKIEALPTFILFKDGEPCDR 150
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 41.5 bits (93), Expect = 1e-04
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANE 203
V+++F+ATWCGPCK+I P ++ ++ E
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQE 115
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +1
Query: 211 DSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQE 318
D + ++K+D D + AE+ + +P F+ K +E
Sbjct: 118 DKLTIVKIDHDANPKLIAEFKVYGLPHFILFKDGKE 153
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 41.1 bits (92), Expect = 2e-04
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 123 LVVIDFMATWCGPCKMIGPKLDEMANEI 206
LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 30 LVVVDFTASWCGPCRFIAPFFADLAKKL 57
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +1
Query: 196 LTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVK 306
L K +++ LKVD DE + +A+++ I AMPTF+++K
Sbjct: 53 LAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLK 89
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 15 VLPGRFYCFPI*RYKMSIHIKDFDDLKTRLSEAGDKLV--VIDFMATWCGPCKMIGPKLD 188
+L R +CF + +K + + LS+A D + V F A WCGPC++I P +
Sbjct: 35 LLNRRSFCFAEGDRSSFVVLKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVIL 94
Query: 189 EMANE 203
E++N+
Sbjct: 95 ELSNK 99
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 38.3 bits (85), Expect = 0.001
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANEIV-RLHC 221
V+++F +WCGPC+M+ +DE+A + +L+C
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNC 119
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 60 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
+ ++ +FD+L T E L +++F A WCG CK + P+ + AN +
Sbjct: 166 VELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNL 210
Score = 31.1 bits (67), Expect = 0.19
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +3
Query: 123 LVVIDFMATWCGPCKMIGPKLDEMANEI 206
+V+++F A WCG C+ + P +++A+ +
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTL 75
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +3
Query: 114 GDKLV--VIDFMATWCGPCKMIGPKLDEMANE 203
GD+ V ++DF ATWCGPC ++ +L+ +A E
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVE 122
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = +1
Query: 220 VVLKVDVDECEDIAAEYNINAMPTFVYVKGD 312
+++KVD D+ + A + + +PT ++ D
Sbjct: 128 IIVKVDTDDEYEFARDMQVRGLPTLFFISPD 158
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 36.7 bits (81), Expect = 0.004
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANEIVRL 215
+ +DF A WCG CK + P+LD A + +L
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKL 81
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 36.3 bits (80), Expect = 0.005
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEMA 197
K V+I+F A WCG C+ + P LDE+A
Sbjct: 391 KNVLIEFYAPWCGHCQKLAPILDEVA 416
Score = 34.7 bits (76), Expect = 0.016
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANEI 206
+V++F A WCG C+ + P+ ++ A+E+
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASEL 75
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 35.5 bits (78), Expect = 0.009
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 84 DDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
D K +S+ K +++ F A WC PC+ PKL E+ +I
Sbjct: 352 DGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEVYKQI 392
Score = 35.1 bits (77), Expect = 0.012
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEMANEI 206
K + + F A WCGPC+ P+L E+ NE+
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 35.5 bits (78), Expect = 0.009
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEMA 197
K V+++F A WCG C+ + P LDE+A
Sbjct: 393 KNVLLEFYAPWCGHCQKLAPILDEVA 418
Score = 34.3 bits (75), Expect = 0.021
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANEI 206
+V++F A WCG CK + P+ ++ A+ +
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASAL 76
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 35.5 bits (78), Expect = 0.009
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEMA 197
K V+++F A WCG C+ + P LDE+A
Sbjct: 393 KNVLLEFYAPWCGHCQKLAPILDEVA 418
Score = 34.3 bits (75), Expect = 0.021
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANEI 206
+V++F A WCG CK + P+ ++ A+ +
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASAL 76
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 35.1 bits (77), Expect = 0.012
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 60 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
+ ++ +FDDL +E L +++F A WCG CK + P+ A +
Sbjct: 165 VELNASNFDDLVIESNE----LWIVEFFAPWCGHCKKLAPEWKRAAKNL 209
Score = 34.3 bits (75), Expect = 0.021
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 123 LVVIDFMATWCGPCKMIGPKLDEMAN 200
+V+++F A WCG CK + P +++AN
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVAN 75
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 35.1 bits (77), Expect = 0.012
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 226 LKVDVDECEDIAAEYNINAMPTFVYVK 306
L VDVDE +++A++ + AMPTF+++K
Sbjct: 59 LIVDVDEVKEVASQLEVKAMPTFLFLK 85
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 34.7 bits (76), Expect = 0.016
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +3
Query: 72 IKDFDDLKTRLSEAGD--KLVVIDFMATWCGPCKMIGPKLDEMANE 203
I + ++L LS A + ++I++MA+WC C + PKL+++A E
Sbjct: 101 INNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAE 146
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 34.7 bits (76), Expect = 0.016
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 81 FDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
FD + + G+ +V++ +MA WC C + PKL+++A E
Sbjct: 87 FDQVMEDAQKLGESVVIV-WMAAWCRKCIYLKPKLEKLAAE 126
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 34.7 bits (76), Expect = 0.016
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 72 IKDFDDLKTRLSEAGDKLV--VIDFMATWCGPCKMIGPKLDEMANE 203
+K ++ +S+A D + V F A WCGPC+ I P + E++ +
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQ 134
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 33.1 bits (72), Expect = 0.047
Identities = 12/40 (30%), Positives = 27/40 (67%)
Frame = +1
Query: 214 SIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
S++ + VDV+E + + E+N+ A PT V++K ++ +++
Sbjct: 39 SMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQMDKLV 78
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 144 ATWCGPCKMIGPKLDEMAN 200
A WC PCK I P ++A+
Sbjct: 17 APWCVPCKKIEPVFRDLAS 35
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 33.1 bits (72), Expect = 0.047
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEM 194
DK +++F A WCG CK + P+ +++
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKL 65
Score = 33.1 bits (72), Expect = 0.047
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEMA 197
+K V+++F A WCG CK + P +++A
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVA 185
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 202 KLSDSIVVLKVDVDECEDIAAEYNINAMPTFV-YVKGDQETRR 327
K + S+++ KVD DE + + +Y ++ PT + KG E ++
Sbjct: 70 KKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQK 112
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 33.1 bits (72), Expect = 0.047
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEM 194
DK +++F A WCG CK + P+ +++
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKL 65
Score = 33.1 bits (72), Expect = 0.047
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEMA 197
+K V+++F A WCG CK + P +++A
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVA 185
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 202 KLSDSIVVLKVDVDECEDIAAEYNINAMPTFV-YVKGDQETRR 327
K + S+++ KVD DE + + +Y ++ PT + KG E ++
Sbjct: 70 KKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQK 112
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 33.1 bits (72), Expect = 0.047
Identities = 11/40 (27%), Positives = 28/40 (70%)
Frame = +1
Query: 214 SIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
S++ + +DV+E + + E+N++A PT V++K ++ +++
Sbjct: 93 SMIFVTIDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLV 132
Score = 32.3 bits (70), Expect = 0.083
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 57 KMSIH-IKDFDDLKTRLSEAGD--KLVVIDFMATWCGPCKMIGPKLDEMAN 200
K +H + + + +++EA K++V++F A+WC P K I P E+A+
Sbjct: 39 KGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELAS 89
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 32.3 bits (70), Expect = 0.083
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 84 DDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEIVRL 215
DD+K+ S A VI++ A+WCG C I P +++N +L
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFSKL 75
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 32.3 bits (70), Expect = 0.083
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANE 203
V++ F A WCGPC+ + P L++M +E
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSE 255
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 31.5 bits (68), Expect = 0.14
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
++ V+++F A WCG C+ + P+ A E+
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATEL 149
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 DSIVVLKVDVDECEDIAAEYNINAMPTFV-YVKGDQE 318
D +V+ K+D E ++A EY + PT + +V G+ +
Sbjct: 152 DGVVLAKIDATEENELAQEYRVQGFPTLLFFVDGEHK 188
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEMANEI 206
K V+++ A WCG C+ + P +++A +
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHL 488
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 31.5 bits (68), Expect = 0.14
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
++ V+++F A WCG C+ + P+ A E+
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATEL 149
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 DSIVVLKVDVDECEDIAAEYNINAMPTFV-YVKGDQE 318
D +V+ K+D E ++A EY + PT + +V G+ +
Sbjct: 152 DGVVLAKIDATEENELAQEYRVQGFPTLLFFVDGEHK 188
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEMANEI 206
K V+++ A WCG C+ + P +++A +
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHL 488
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 31.1 bits (67), Expect = 0.19
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 214 SIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
SI LKVD+D+C I N+ +PT K + ++
Sbjct: 644 SIHFLKVDIDKCPSIGNAENVRVVPTVKIYKNGSRVKEIV 683
>At4g12170.1 68417.m01934 thioredoxin family protein similar to
SP|Q9SEU6 Thioredoxin M-type 4, chloroplast precursor
(TRX-M4) {Arabidopsis thaliana}; contains Pfam profile:
PF00085 Thioredoxin
Length = 128
Score = 29.9 bits (64), Expect = 0.44
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 232 VDVDECEDIAAEYNINAMPTFVYVKGDQETRRVL 333
VD DE ++A +Y I P + KG +E RVL
Sbjct: 80 VDTDEELELAKDYRIEYHPITIVFKGGEEKERVL 113
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 29.5 bits (63), Expect = 0.58
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
+ +++F A WCG C+ + P+ A E+
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATEL 145
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 199 TKLSDSIVVLKVDVDECEDIAAEYNINAMPT-FVYVKGD 312
T+L + K+D E D+A +Y I PT F++V G+
Sbjct: 143 TELKGLAALAKIDATEEGDLAQKYEIQGFPTVFLFVDGE 181
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 196 LTKLSDSIVVLKVDVDECEDIAAEYNINAMPT-FVYVKGDQET 321
L ++ S+++ K+D D IA+E I PT ++V G T
Sbjct: 123 LKEIGSSVLMAKIDGDRYSKIASELEIKGFPTLLLFVNGTSLT 165
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 105 SEAGDKLVVIDFMATWCGPCKMI 173
S+ + LVV+DF T CG CK I
Sbjct: 116 SKETNSLVVVDFYRTACGSCKYI 138
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 105 SEAGDKLVVIDFMATWCGPCKMI 173
S+ + LVV+DF T CG CK I
Sbjct: 103 SKETNSLVVVDFYRTACGSCKYI 125
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 105 SEAGDKLVVIDFMATWCGPCKMI 173
S+ + LVV+DF T CG CK I
Sbjct: 103 SKETNSLVVVDFYRTACGSCKYI 125
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKL 185
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKL 185
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 105 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
+ G KL+V+D CGPC + P + +++ +
Sbjct: 203 NRTGGKLIVLDVGLKHCGPCVKVYPTVLKLSRSM 236
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 PNSTRWLTKLSDSIVVLKVDVDE---CEDIAAEYNINAMPTFVYVKGDQETR 324
P + +S+++V +++ DE C + + N+ +PTF++++ D E R
Sbjct: 227 PTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNVIEVPTFLFIR-DGEIR 277
>At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-like
SR protein (SRZ22) identical to RSZp22 protein
[Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like
SR protein [Arabidopsis thaliana] GI:3435094; contains
Pfam profiles PF00076: RNA recognition motif. (a.k.a.
RRM, RBD, or RNP domain) and PF00098: Zinc knuckle;
identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093
Length = 200
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 180 WARSSCRVRTKSP*SQSRRACRPPPTAWSSSHRSP 76
+ R S R +SP RR+ PPP S RSP
Sbjct: 141 YGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSP 175
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 27.1 bits (57), Expect = 3.1
Identities = 8/35 (22%), Positives = 22/35 (62%)
Frame = +3
Query: 99 RLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE 203
+L +++++ + + CGPC+ + P L+++ +E
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDE 470
>At5g48120.1 68418.m05944 expressed protein low similarity to MMS19
[Mus musculus] GI:14029390
Length = 1152
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 196 LTKLSDSIVVLKVDVDEC-EDIAAEYNINAM 285
L KLS S+ V KVD +C +D A +Y ++ M
Sbjct: 272 LEKLSSSLPVAKVDSLKCLKDCALKYGVDRM 302
>At5g13390.1 68418.m01542 expressed protein
Length = 1123
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -3
Query: 154 HQVAMKS--ITTSLSPASDSLVFKSSKSLMWIDILYL 50
H++ K+ I T L A +++F SSKS++W+ L
Sbjct: 551 HRIGQKAVWILTCLYSAKLAMLFLSSKSIVWVSAALL 587
>At4g27060.1 68417.m03891 expressed protein
Length = 864
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 63 SIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEI 206
S+ + D D + AGD+ +VI M GP LD+M+NEI
Sbjct: 732 SLRVGDIDAAYAEVLCAGDQHLVIKLM-------DKTGPSLDQMSNEI 772
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANEIVRLH 218
VV+ F A+WC K + +A + R H
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAH 54
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 229 KVDVDECEDIAAEYNINAMPTF-VYVKGDQ 315
KVDV+E +A +I +PTF +Y KG++
Sbjct: 632 KVDVEESLALAKAESIKKIPTFKIYKKGEK 661
>At5g40150.1 68418.m04872 peroxidase, putative identical to
peroxidase ATP26a {Arabidopsis thaliana}
GP|1890317|emb|CAA72487
Length = 328
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 200 RNCPTPLLFLRSTLTNAKTSPPNITSTRCRL 292
++CP L +R T+TN + S P + RL
Sbjct: 39 KSCPKFLDIIRETITNKQISTPTTAAAALRL 69
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2
Query: 140 EVNHDELVARLRQPGLQVIEVL 75
EVN DE+++R R+ GL +E+L
Sbjct: 85 EVNEDEILSRRRRSGLGDLELL 106
>At5g24190.1 68418.m02846 hypothetical protein
Length = 245
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = -3
Query: 205 ISLAISSSLGPIILQGPHQVA---MKSITTSLSPA-SDSLVFKSSKSLMWIDILYL 50
IS+ + G ++L+G ++ +K+ +++ A +D V + SK+ +WI LY+
Sbjct: 76 ISIPLEQLPGGVLLKGVFRITESLVKATAATVTMALTDQRVQEDSKTALWIPYLYV 131
>At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to
cytochrome P450 71B10 (SP:Q9LVD2) [Arabidopsis thaliana]
Length = 1483
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 2 IIAACSTRSILLFSYLKVQNVD 67
++ T S LL SY+KVQN+D
Sbjct: 920 VVGDVITYSTLLDSYIKVQNID 941
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/43 (23%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 196 LTKLSDSIVVLKVDVDECEDIAAEYNINAMPT-FVYVKGDQET 321
L ++ S+++ K+D + +A++ I PT ++V G ++
Sbjct: 121 LKEIGSSVLMAKIDGERYSKVASQLEIKGFPTLLLFVNGTSQS 163
>At2g28600.1 68415.m03476 expressed protein
Length = 502
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -3
Query: 205 ISLAISSSLGPIILQGPHQVAMKSITTSLSPASDSLVFKSSKSLMWIDILYL*IGKQ*NR 26
+SL + LG + G + A+KSI ++S ++VF +S S I + +G NR
Sbjct: 271 VSLLVIDELGSLC-SGGYLNAVKSIKQAISSKHQTIVFNNSFSASIIPAVQSFLGGSVNR 329
>At1g74360.1 68414.m08615 leucine-rich repeat transmembrane protein
kinase, putative similar to brassinosteroid insensitive
1 GB:AAC49810 (putative receptor protein kinase);
contains Pfam profiles: PF00560 Leucine Rich Repeat (17
repeats), PF00069 Eukaryotic protein kinase domain
Length = 1106
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 176 PDHLAGSAPSRH-EVNHDELVARLRQPGLQVIEVLDV 69
PD L+ +H ++H+ L L PGL +EVLD+
Sbjct: 128 PDDLSRCHNLKHLNLSHNILEGELSLPGLSNLEVLDL 164
>At1g29640.1 68414.m03623 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 140
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 228 KNNNGVGQFR*PSRRVWARSSCRVRT 151
K NN FR S RVW +SS R +T
Sbjct: 28 KENNRPVDFRENSERVWNKSSRRSKT 53
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEMANEIVRLH 218
+V+ F A+WC K + +A + R H
Sbjct: 24 LVLHFWASWCDASKQMDQVFSHLATDFPRAH 54
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 78 DFDDL-KTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMAN 200
D D L + S+ G+ + + F A+WC + + PK D +++
Sbjct: 60 DGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSS 101
>At1g77670.1 68414.m09043 aminotransferase class I and II family
protein similar to kynurenine aminotransferase
/glutamine transaminase K GI:1030066 [Rattus norvegicus]
Length = 440
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 178 PNSTRWLTKLSDSIVVLKVDVDECEDIAAEYNINAMPTFVYVKGDQETRRVLR 336
P+S + + ++ DV CE + E + A+PT V+ +E + ++R
Sbjct: 363 PSSGTYFVVADHTPFGMENDVAFCEYLIEEVGVVAIPTSVFYLNPEEGKNLVR 415
>At1g69050.1 68414.m07901 expressed protein
Length = 94
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 183 VWARS-SCRVRTKSP*SQSRRACRPPPTAWSSSHRSP*CGSTFC 55
V+ RS SCR++ ++P RPPP+A + S + STFC
Sbjct: 24 VFRRSLSCRLQRRAP-CPLLLPPRPPPSAEAPSTTTGVSTSTFC 66
>At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain;
similar to infertility-related sperm protein [Homo
sapiens] GI:10863768, TPR-containing protein involved in
spermatogenesis TPIS [Mus musculus] GI:6272680
Length = 272
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 179 QTRRDG*RNCPTPLLFLRSTLTNAKTSPPNITSTRCRLSCMLK 307
Q RDG LLF LT AK P I R +C LK
Sbjct: 16 QLYRDG--KYKEALLFYTEALTAAKAKPQKIALHSNRAACYLK 56
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,265,822
Number of Sequences: 28952
Number of extensions: 133148
Number of successful extensions: 544
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 389454624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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