Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D17
(573 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 7e-25
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 97 7e-21
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 95 3e-20
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 94 8e-20
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 91 8e-19
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 90 1e-18
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 7e-18
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 87 1e-17
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 82 3e-16
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 81 6e-16
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 8e-16
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 81 8e-16
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45) 75 4e-14
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18) 62 2e-10
SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13) 62 2e-10
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 7e-10
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 2e-09
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 59 3e-09
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 59 3e-09
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 58 4e-09
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29) 57 9e-09
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 57 1e-08
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 57 1e-08
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04) 56 2e-08
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 55 5e-08
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10) 53 2e-07
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 52 4e-07
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 50 1e-06
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 50 1e-06
SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 49 2e-06
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 49 2e-06
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07) 48 4e-06
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 47 1e-05
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06) 47 1e-05
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 46 2e-05
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 46 3e-05
SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022) 45 5e-05
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 45 5e-05
SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09) 44 7e-05
SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027) 44 9e-05
SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07) 43 2e-04
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 43 2e-04
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013) 43 2e-04
SB_46026| Best HMM Match : Collagen (HMM E-Value=0.00013) 42 3e-04
SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04) 42 4e-04
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 42 4e-04
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 42 5e-04
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 42 5e-04
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 41 6e-04
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 41 6e-04
SB_36020| Best HMM Match : Collagen (HMM E-Value=0.31) 41 6e-04
SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029) 38 0.004
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078) 37 0.010
SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05) 37 0.010
SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003) 37 0.010
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048) 37 0.010
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036) 37 0.013
SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14) 36 0.031
SB_583| Best HMM Match : Collagen (HMM E-Value=0.0088) 35 0.041
SB_47682| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.041
SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8) 35 0.054
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 34 0.072
SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035) 34 0.072
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_11354| Best HMM Match : Collagen (HMM E-Value=0.09) 34 0.095
SB_10146| Best HMM Match : Collagen (HMM E-Value=0.09) 34 0.095
SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 34 0.095
SB_25787| Best HMM Match : Asparaginase_2 (HMM E-Value=0.097) 33 0.13
SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01) 33 0.13
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 33 0.13
SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_18205| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 33 0.17
SB_50127| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_4883| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 32 0.29
SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 32 0.29
SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018) 32 0.29
SB_33143| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042) 32 0.38
SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_17162| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_24333| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.55
SB_36926| Best HMM Match : Flocculin (HMM E-Value=0.93) 31 0.67
SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 31 0.88
SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031) 31 0.88
SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031) 31 0.88
SB_33012| Best HMM Match : DUF1388 (HMM E-Value=2.6e-18) 30 1.2
SB_18132| Best HMM Match : Collagen (HMM E-Value=1.2) 30 1.2
SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11) 30 1.2
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 30 1.2
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_46511| Best HMM Match : DUF776 (HMM E-Value=3.7) 30 1.5
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 30 1.5
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 30 1.5
SB_29605| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 2.0
SB_56589| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.1) 29 2.0
SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22) 29 2.0
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56) 29 2.7
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_53555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18) 29 2.7
SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_53235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35) 29 3.6
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_56576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 28 4.7
SB_31470| Best HMM Match : SAND (HMM E-Value=5e-37) 28 4.7
SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 4.7
SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_51462| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-15) 28 4.7
SB_19556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2) 28 6.2
SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 28 6.2
SB_30795| Best HMM Match : Epimerase (HMM E-Value=0) 28 6.2
SB_19090| Best HMM Match : Collagen (HMM E-Value=0.1) 28 6.2
SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31) 28 6.2
SB_165| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_36778| Best HMM Match : Collagen (HMM E-Value=0.96) 28 6.2
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 28 6.2
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 27 8.2
SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59) 27 8.2
SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 27 8.2
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 23 8.5
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 110 bits (265), Expect = 7e-25
Identities = 67/155 (43%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTG---FPGITGEKGDKGDQGPVGYGLPGEXXXXX 179
G+KG G G G GQPG G +GP G FPG G +G+KG GP G PG
Sbjct: 1046 GEKGLDGPSGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEKGRMGPPGTSEPGNVPGPK 1105
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD---KG 350
G G+DG PG +G G GEKGD G PG+ GLTG PG G KG
Sbjct: 1106 GDPGPAGPRGPA--GRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKG 1163
Query: 351 EPAAVVY----GQKGEPGP---RGVPGIDGLPGSD 434
EP G+KGEPGP G+ G+DG PG D
Sbjct: 1164 EPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPD 1198
Score = 105 bits (252), Expect = 3e-23
Identities = 63/143 (44%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGN--DGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
G +G KGE G +G+ G+ G DG GP G PG+TGE+G KGD GP G PG
Sbjct: 820 GVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTGEQGVKGDTGPSGE--PGPAGPPGP 877
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G G GR G G G G KGD G GR GL GEPG +GD G
Sbjct: 878 LGTPGTQGAKGEPGPLGTPGRQGLAGPPGRDGMKGDPGPRGRDGLPGEPGARGDIGS--- 934
Query: 363 VVYGQKGEPGPRGVPGIDGLPGS 431
G GE GPRG PGI G+ G+
Sbjct: 935 --RGLPGEDGPRGPPGIQGMKGA 955
Score = 98.3 bits (234), Expect = 4e-21
Identities = 63/150 (42%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY----GLPGEXXXX 176
GQ G KGE G G+ G G G+ G G PG G +G KGDQGP G G PG
Sbjct: 1322 GQAGPKGETGLPGMPGLDGEKGSAGVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVDGPT 1381
Query: 177 XXXXXXXXXXXXXXRGERGLDGR--PGGQ----GAIGMSGEKGDRGFPGRSGLTGEPGYK 338
+GE GL GR P G+ G G+ G+KGDRG PG SG GE G +
Sbjct: 1382 GPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSGLRGDKGDRGLPGPSGPPGEEGAR 1441
Query: 339 GDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G G P + G KGE G G GI G G
Sbjct: 1442 GSDGFPG--IPGSKGERGLIGPKGIKGERG 1469
Score = 96.3 bits (229), Expect = 2e-20
Identities = 65/166 (39%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGP------------------TGFPGITGEKGDKGD 131
+G+KG G G G G+ G DG GP GFPG G +G+KG
Sbjct: 1030 IGEKGYAGLPGPRGETGEKGLDGPSGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEKGR 1089
Query: 132 QGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRS 311
GP G PG G G+DG PG +G G GEKGD G PG+
Sbjct: 1090 MGPPGTSEPGNVPGPKGDPGPAGPRGPA--GRNGIDGLPGTKGEPGSLGEKGDAGIPGQR 1147
Query: 312 GLTGEPGY---KGDKGEPAAVVY----GQKGEPGPRGVPGIDGLPG 428
GLTG PG +G KGEP G+KGEPGP G GI+GL G
Sbjct: 1148 GLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGINGLDG 1193
Score = 95.9 bits (228), Expect = 2e-20
Identities = 65/156 (41%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G+ G KGE GR+G+ GQ G G GP G G G G G GPVG G PGE
Sbjct: 974 GRPGLKGERGRDGLDGQNGLPGIPGPKGDTGPVGPPGRPGLPGPVGKEGPPGEDGNIGEK 1033
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG----- 350
GE+GLDG G G G G G RG GR G G G +G+KG
Sbjct: 1034 GYAGLPGPRGETGEKGLDGPSGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEKGRMGPP 1093
Query: 351 ---EPAAVVYGQKGEPGPRGV------PGIDGLPGS 431
EP V G KG+PGP G GIDGLPG+
Sbjct: 1094 GTSEPGNVP-GPKGDPGPAGPRGPAGRNGIDGLPGT 1128
Score = 93.9 bits (223), Expect = 8e-20
Identities = 61/149 (40%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G +G KGE GR+G G PG G GP G GI G G G GP G G+ G+
Sbjct: 1157 GAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGVQGVKGDPGVGQPG 1216
Query: 186 XXXXXXXXXXXRGERGLDGRPG--G-QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE- 353
+GERG++G PG G QG G+ G G G PG+ G TG G KGD+GE
Sbjct: 1217 LPGPAGP----KGERGVNGFPGIKGIQGVQGLEGPPGPPGPPGQIGFTGAKGSKGDQGEL 1272
Query: 354 ----PAAVVYGQKGEPGPRGVPGIDGLPG 428
A G G G RG+PG++GL G
Sbjct: 1273 VIERGAPGPRGNTGAKGDRGIPGLNGLSG 1301
Score = 93.9 bits (223), Expect = 8e-20
Identities = 59/173 (34%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY----GLPGEXXXX 176
G KG +G G G++G PG G GP G PG+ G G G +G G GL GE
Sbjct: 1286 GAKGDRGIPGLNGLSGIPGERGPVGPAGPPGLPGRAGQAGPKGETGLPGMPGLDGEKGSA 1345
Query: 177 XXXXXXXXXXXXXXRGER---GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGY---- 335
+G++ GL+G PG G G +G KG+ G G G GEPG
Sbjct: 1346 GVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVDGPTGPKGESGIAGLDGPKGEPGLPGRD 1405
Query: 336 --KGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGDR 488
G+KG P + G +G+ G RG+PG G PG + KG+R
Sbjct: 1406 GPAGEKGSPG--LSGLRGDKGDRGLPGPSGPPGEEGARGSDGFPGIPGSKGER 1456
Score = 92.3 bits (219), Expect = 3e-19
Identities = 61/152 (40%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
GQ G G++G +G G PG G G G PG G KG G GPVG G PGE
Sbjct: 543 GQIGDPGKMGPQGFKGDPGPPGPPGEVGVPGAPGMKGPIGKPGPVGDAGAPGE-KGARGL 601
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
RG RG G G G G G+ D G PG GL G G GD+G P +
Sbjct: 602 SIQGTPGMDGKRGPRGPIGEKGPTGFPGPPGD-SDYGPPGDKGLKGNTGPPGDEGVPGPI 660
Query: 366 VYGQKGE---------PGPRGVPGIDGLPGSD 434
G KG+ PGP G PG GLPG D
Sbjct: 661 --GPKGDKCEACPKPPPGPAGEPGSPGLPGED 690
Score = 90.2 bits (214), Expect = 1e-18
Identities = 59/149 (39%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQ---GPTGFPGITGEKGDKGDQGPVGYGLPGEXXX 173
A G+ G G GR+G+AG PG DG + GP G G+ GE G +GD G GLPGE
Sbjct: 886 AKGEPGPLGTPGRQGLAGPPGRDGMKGDPGPRGRDGLPGEPGARGDIG--SRGLPGEDGP 943
Query: 174 XX--XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDK 347
G G G PG G G+ GE+G G G++GL G PG KGD
Sbjct: 944 RGPPGIQGMKGAKGDAITGPTGPPGPPGLPGRPGLKGERGRDGLDGQNGLPGIPGPKGDT 1003
Query: 348 GEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
G G G PG G G +G PG D
Sbjct: 1004 GP-----VGPPGRPGLPGPVGKEGPPGED 1027
Score = 89.0 bits (211), Expect = 2e-18
Identities = 54/145 (37%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY----GLPGEXXXXXX 182
K G G G G PG DGA G G PG +GE G G G G GLPG
Sbjct: 672 KPPPGPAGEPGSPGLPGEDGAIGSRGLPGPSGEPGKPGPAGRAGLAGQDGLPGTPGTKGE 731
Query: 183 XX-XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+GE+G G+ GG G G G +GD G PG G TG PG G
Sbjct: 732 PGPTGEKGEVFRIKGEKGAKGQQGGIGNPGPPGLRGDVGPPGEQGPTGVPGESWTSGGVG 791
Query: 360 AVVYGQKGEPGPRGVPGIDGLPGSD 434
+ G G+PG G G+ G PG D
Sbjct: 792 QIKQGPPGDPGNPGTDGLPGAPGRD 816
Score = 87.8 bits (208), Expect = 5e-18
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G KG G +G+ G+ G G G +G GFPGI G +G +G +GP G G PG+
Sbjct: 1205 GVKGDPG-VGQPGLPGPAGPKGERGVNGFPGIKGIQGVQGLEGPPGPPGPPGQIGFTGAK 1263
Query: 186 XXXXXXXXXXXRGERG-LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
+G++G L G G G +G KGDRG PG +GL+G PG +G G PA
Sbjct: 1264 GS---------KGDQGELVIERGAPGPRGNTGAKGDRGIPGLNGLSGIPGERGPVG-PAG 1313
Query: 363 V--VYGQKGEPGPRGVPGIDGLPGSD 434
+ G+ G+ GP+G G+ G+PG D
Sbjct: 1314 PPGLPGRAGQAGPKGETGLPGMPGLD 1339
Score = 87.4 bits (207), Expect = 7e-18
Identities = 59/144 (40%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
LG G +G G G G PG G GP PG G KGD G +G GLPGE
Sbjct: 878 LGTPGTQGAKGEPGPLGTPGRQGLAGP---PGRDGMKGDPGPRG--RDGLPGEPGARGDI 932
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQG-AI-GMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
RG G+ G G +G AI G +G G G PGR GL GE G G G+
Sbjct: 933 GSRGLPGEDGPRGPPGIQGMKGAKGDAITGPTGPPGPPGLPGRPGLKGERGRDGLDGQNG 992
Query: 360 AV-VYGQKGEPGPRGVPGIDGLPG 428
+ G KG+ GP G PG GLPG
Sbjct: 993 LPGIPGPKGDTGPVGPPGRPGLPG 1016
Score = 87.0 bits (206), Expect = 1e-17
Identities = 58/150 (38%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTG---FPGITGEKGDKGDQG-PVGYGLPGEXXXX 176
G KG+ G G +G G+PG G GP G PG++G +GDKGD+G P G PGE
Sbjct: 1382 GPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSGLRGDKGDRGLPGPSGPPGEEGAR 1441
Query: 177 XXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGF----PGRSGLTGEPGYKGD 344
G G+ G G +G IG G KG+RG+ PG G G+ G+ G
Sbjct: 1442 GSD------------GFPGIPGSKGERGLIGPKGIKGERGYGKGIPGPRGEKGDSGFPGI 1489
Query: 345 KGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
G P GQ+G G RG PG G G D
Sbjct: 1490 NGPPGPP--GQRGYEGARGPPGAKGQAGED 1517
Score = 86.6 bits (205), Expect = 1e-17
Identities = 57/153 (37%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPG----ITGEKGDKGDQGPVGY----GLPGE 164
G G+ G G++G+ G PG G GPTG G I GEKG KG QG +G GL G+
Sbjct: 709 GPAGRAGLAGQDGLPGTPGTKGEPGPTGEKGEVFRIKGEKGAKGQQGGIGNPGPPGLRGD 768
Query: 165 XXXXXXXXXXXXXXXXXXRG-----ERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP 329
G ++G G PG G G+ G G G G G GEP
Sbjct: 769 VGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPGNPGTDGLPGAPGRDGIDGVRGPKGEP 828
Query: 330 GYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G G KGE + G G PGP GV G G+ G
Sbjct: 829 GSDGMKGEAGVGIDGPPGPPGPPGVTGEQGVKG 861
Score = 86.6 bits (205), Expect = 1e-17
Identities = 58/137 (42%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G +G KG+ G G +G PG +GA+G GFPGI G KG++G GP G
Sbjct: 1418 GLRGDKGDRGLPGPSGPPGEEGARGSDGFPGIPGSKGERGLIGPKG-------------- 1463
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP---GYKGDKGEPA 359
+GERG G+G G GEKGD GFPG +G G P GY+G +G P
Sbjct: 1464 ---------IKGERGY-----GKGIPGPRGEKGDSGFPGINGPPGPPGQRGYEGARGPPG 1509
Query: 360 AVVYGQKGEPGPRGVPG 410
A GQ GE G GVPG
Sbjct: 1510 A--KGQAGEDGRPGVPG 1524
Score = 85.4 bits (202), Expect = 3e-17
Identities = 58/156 (37%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Frame = +3
Query: 9 GQKGQKGELGR-----EGIAGQPGNDGAQGP------TGFPGITGEKGDKGDQGPVGYGL 155
G G KGE GR +G+ G+PG +G QGP TGFPG+ G +G G +GP G
Sbjct: 253 GVPGPKGEPGRAPTLLKGVKGEPGPEGPQGPPGVRGDTGFPGLNGTQGLPGPKGPPGPTG 312
Query: 156 PGEXXXXXXXXXXXXXXXXXXRGERGLDGRP-GGQGAIGMSGEKGDRGFPGRSGLTGEPG 332
P +G +G G P GG G G +G +G PG G GEPG
Sbjct: 313 PEGPKGNMGISFKGPQGMKGDKGTKGARGPPGGGSGGSGCNGTTIFKGPPGAPGEKGEPG 372
Query: 333 YKGDKGEPAAV----VYGQKGEPGPRGVPGIDGLPG 428
+G+KGE G +G G RG PG GL G
Sbjct: 373 KQGEKGEEGRPGLPGAQGIEGPKGERGEPGNQGLKG 408
Score = 85.0 bits (201), Expect = 4e-17
Identities = 50/140 (35%), Positives = 62/140 (44%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G KG G G G AG+ G DG G G PG GEKGD G +PG+
Sbjct: 1103 GPKGDPGPAGPRGPAGRNGIDGLPGTKGEPGSLGEKGDAG--------IPGQRGLTGNPG 1154
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
G G +G PG +G G +G+ G G G G G G +G KG+P
Sbjct: 1155 LPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGVQGVKGDPGVGQ 1214
Query: 369 YGQKGEPGPRGVPGIDGLPG 428
G G GP+G G++G PG
Sbjct: 1215 PGLPGPAGPKGERGVNGFPG 1234
Score = 79.8 bits (188), Expect = 1e-15
Identities = 60/167 (35%), Positives = 68/167 (40%), Gaps = 6/167 (3%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A GQ+G G G G+ G G G QGPTG PG E G G + G PG+
Sbjct: 750 AKGQQGGIGNPGPPGLRGDVGPPGEQGPTGVPG---ESWTSGGVGQIKQGPPGDPGNPGT 806
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGE--KGDRGFPGRSGLTGEPGYKGD---K 347
G RG G PG G G +G G G PG G+TGE G KGD
Sbjct: 807 DGLPGAPGRDGIDGVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTGEQGVKGDTGPS 866
Query: 348 GEPA-AVVYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGD 485
GEP A G G PG +G G G G+ MKGD
Sbjct: 867 GEPGPAGPPGPLGTPGTQGAKGEPGPLGTPGRQGLAGPPGRDGMKGD 913
Score = 78.6 bits (185), Expect = 3e-15
Identities = 57/149 (38%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGF---PGITGEKGDKGDQGPVG----YGLPGEX 167
G G +G G G G GN G GP G PG G +G KGD GP G G+PG
Sbjct: 516 GPDGDRGPQGPTGFPGTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGPPGPPGEVGVPGAP 575
Query: 168 XXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDK 347
GE+G G QG GM G++G RG G G TG PG GD
Sbjct: 576 GMKGPIGKPGPVGDAGAPGEKGARGL-SIQGTPGMDGKRGPRGPIGEKGPTGFPGPPGDS 634
Query: 348 --GEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G P G KG G G PG +G+PG
Sbjct: 635 DYGPP-----GDKGLKGNTGPPGDEGVPG 658
Score = 77.8 bits (183), Expect = 6e-15
Identities = 57/155 (36%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGND---GAQGPTGFPGITGEKGDKGDQGPVG----YGLPGE 164
+G G+ G G G G PG D G +G G PG GE G+KG GP G G PG
Sbjct: 1006 VGPPGRPGLPGPVGKEGPPGEDGNIGEKGYAGLPGPRGETGEKGLDGPSGPPGTPGQPGP 1065
Query: 165 XXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGD------RGFPGRSGLTGE 326
+GE+G G PG + G KGD RG GR+G+ G
Sbjct: 1066 PGPRGPEGRQGFPGFKGNQGEKGRMGPPGTSEPGNVPGPKGDPGPAGPRGPAGRNGIDGL 1125
Query: 327 PGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
PG KG+ G G G PG RG+ G GLPG+
Sbjct: 1126 PGTKGEPGSLGE--KGDAGIPGQRGLTGNPGLPGA 1158
Score = 74.9 bits (176), Expect = 4e-14
Identities = 57/151 (37%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPT--GFPGITGEKGDKG---DQGPVGY-GLPGE 164
A G KG G+ G G AG PG GA+G + G PG+ G++G +G ++GP G+ G PG+
Sbjct: 574 APGMKGPIGKPGPVGDAGAPGEKGARGLSIQGTPGMDGKRGPRGPIGEKGPTGFPGPPGD 633
Query: 165 XXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDR--GFPGRS-GLTGEPGY 335
+G +G G PG +G G G KGD+ P G GEPG
Sbjct: 634 SDYGPPGD----------KGLKGNTGPPGDEGVPGPIGPKGDKCEACPKPPPGPAGEPGS 683
Query: 336 KGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G GE A+ G +G PGP G PG G G
Sbjct: 684 PGLPGEDGAI--GSRGLPGPSGEPGKPGPAG 712
Score = 73.7 bits (173), Expect = 1e-13
Identities = 52/137 (37%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGIT--GEKGDKGDQGPVGY-GLPGEXXXXX 179
G G G G G G PG G +GP G GI+ G +G KGD+G G G PG
Sbjct: 291 GFPGLNGTQGLPGPKGPPGPTGPEGPKGNMGISFKGPQGMKGDKGTKGARGPPGGGSGGS 350
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+G G PG +G G GEKG+ G PG G G G KG++GEP
Sbjct: 351 GCNGTTIF--------KGPPGAPGEKGEPGKQGEKGEEGRPGLPGAQGIEGPKGERGEPG 402
Query: 360 AVVYGQKGEPGPRGVPG 410
G KG+ G G PG
Sbjct: 403 N--QGLKGDRGVDGNPG 417
Score = 69.7 bits (163), Expect = 2e-12
Identities = 51/132 (38%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXX 212
G GI G PG DG +GP G G G KG++G GP G G PG+
Sbjct: 508 GLPGI-GPPGPDGDRGPQGPTGFPGTKGNQGIAGPPGQIGDPGKMGPQGF---------- 556
Query: 213 XXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 392
+G+ G G PG G G G KG G PG G G PG KG +G G G+ G
Sbjct: 557 --KGDPGPPGPPGEVGVPGAPGMKGPIGKPGPVGDAGAPGEKGARGLSIQGTPGMDGKRG 614
Query: 393 PRGVPGIDGLPG 428
PRG G G G
Sbjct: 615 PRGPIGEKGPTG 626
Score = 62.1 bits (144), Expect = 3e-10
Identities = 53/146 (36%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Frame = +3
Query: 63 GNDGAQGPTGFP--------GITGEKGDKGDQGPVGY----GLPGEXXXXXXXXXXXXXX 206
G DG GP G P G+ GE G +G QGP G G PG
Sbjct: 250 GQDGVPGPKGEPGRAPTLLKGVKGEPGPEGPQGPPGVRGDTGFPGLNGTQGLPGPKGPPG 309
Query: 207 XXXXRGERGLDG--RPGGQGAIGMSGEKGDRGFPGR-------SGLT---GEPGYKGDKG 350
G +G G G QG G G KG RG PG +G T G PG G+KG
Sbjct: 310 PTGPEGPKGNMGISFKGPQGMKGDKGTKGARGPPGGGSGGSGCNGTTIFKGPPGAPGEKG 369
Query: 351 EPAAVVYGQKGEPGPRGVPGIDGLPG 428
EP G+KGE G G+PG G+ G
Sbjct: 370 EPGK--QGEKGEEGRPGLPGAQGIEG 393
Score = 58.4 bits (135), Expect = 4e-09
Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQ-------PGNDGAQGPTGFPGITGEKGDKGDQGPVGY----GL 155
G KG++G +G +GI G+ PG G +G +GFPGI G G G +G G G
Sbjct: 1451 GSKGERGLIGPKGIKGERGYGKGIPGPRGEKGDSGFPGINGPPGPPGQRGYEGARGPPGA 1510
Query: 156 PGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGY 335
G+ + DG PG +G +G G G G G G+ G PGY
Sbjct: 1511 KGQAGEDGRPGVPGRRFVLVKTVKGREDGFPGIEGPLGEKGATGLPGLTGSIGVPGPPGY 1570
Score = 55.2 bits (127), Expect = 4e-08
Identities = 53/161 (32%), Positives = 62/161 (38%), Gaps = 20/161 (12%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGN----DGAQGPTGF---PGITGEKGDKGDQGPVGY----GL 155
G +G KG+ G +G G PG G G T F PG GEKG+ G QG G GL
Sbjct: 326 GPQGMKGDKGTKGARGPPGGGSGGSGCNGTTIFKGPPGAPGEKGEPGKQGEKGEEGRPGL 385
Query: 156 PGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPG-----RSGLT 320
PG +G+RG+DG PG G + + R R L
Sbjct: 386 PGAQGIEGPKGERGEPGNQGLKGDRGVDGNPGPIGPLVSKDRRVLRLTQLLLNRLRDNLR 445
Query: 321 GEPGY----KGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
E K GEP G G PG G PG G GS
Sbjct: 446 WETQVTKVTKAPPGEP-----GASGRPGIPGRPGTQGAKGS 481
Score = 53.2 bits (122), Expect = 1e-07
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXX 179
A G+KG+ G+ G +G G+PG GAQG G G GE G++G +G G G PG
Sbjct: 364 APGEKGEPGKQGEKGEEGRPGLPGAQGIEGPKGERGEPGNQGLKGDRGVDGNPGPIGPLV 423
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
+ R Q G+ G GR G+ G PG +G KG
Sbjct: 424 SKDRRVLRLTQLLLNRLRDNLRWETQVTKVTKAPPGEPGASGRPGIPGRPGTQGAKG 480
Score = 35.9 bits (79), Expect = 0.023
Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPT------GFPGITGEKGDKGDQGPVG----YG 152
A G G KG+ G +G G PG T GFPGI G G+KG G G G
Sbjct: 1504 ARGPPGAKGQAGEDGRPGVPGRRFVLVKTVKGREDGFPGIEGPLGEKGATGLPGLTGSIG 1563
Query: 153 LPG 161
+PG
Sbjct: 1564 VPG 1566
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 36 GRE-GIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYG 152
GRE G G G G +G TG PG+TG G G G +G
Sbjct: 1535 GREDGFPGIEGPLGEKGATGLPGLTGSIGVPGPPGYSDFG 1574
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 97.5 bits (232), Expect = 7e-21
Identities = 55/143 (38%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G G+ GE G G G G G QGP G PG TGE G +G++G G G GE
Sbjct: 426 GNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGET 485
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G+RG +G G G G G K G PGR G+ G G +G G +
Sbjct: 486 GPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPGASGRRGAPGAKGS- 544
Query: 366 VYGQKGEPGPRGVPGIDGLPGSD 434
G++G GP G+ G DG PGSD
Sbjct: 545 -RGERGRVGPPGIDGKDGAPGSD 566
Score = 95.5 bits (227), Expect = 3e-20
Identities = 59/150 (39%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFP------GITGEKGDKGDQGPVG-YGLPGE 164
+G G+ G G G G+PG DGA G G P G+TG+ G +G GP G G+ G
Sbjct: 116 VGLPGESGSAGMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGA 175
Query: 165 XXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD 344
RG G G PG QG G SG +G +G G G GEPG GD
Sbjct: 176 PGNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGD 235
Query: 345 KGEPAAV-VYGQKGEPGPRGVPGIDGLPGS 431
KG GQ G GP G PGI G PG+
Sbjct: 236 KGAMGGPGPAGQPGIRGPSGAPGITGNPGA 265
Score = 91.5 bits (217), Expect = 4e-19
Identities = 54/141 (38%), Positives = 65/141 (46%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G+ G G G G+AG+ GN G G G G G +G G QGP GLPG+
Sbjct: 408 GESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPP--GLPGKTGESGPRG 465
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
GERG G G G G +G+ GDRG G G GEPG +G K +P
Sbjct: 466 ERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTP- 524
Query: 369 YGQKGEPGPRGVPGIDGLPGS 431
G++G PG G G G GS
Sbjct: 525 -GRQGMPGASGRRGAPGAKGS 544
Score = 90.2 bits (214), Expect = 1e-18
Identities = 52/140 (37%), Positives = 65/140 (46%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G +G G G +G+ G PGN+GA+G G PG+ G++G G +G G G
Sbjct: 159 GPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPGN--QGPQGPSGPQG 216
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
GE GL G G G G +G+ G RG G G+TG PG G G+
Sbjct: 217 SKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGD----- 271
Query: 369 YGQKGEPGPRGVPGIDGLPG 428
G G PGPRG PG G G
Sbjct: 272 RGPNGSPGPRGAPGPPGKRG 291
Score = 86.6 bits (205), Expect = 1e-17
Identities = 53/149 (35%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQ---PGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXX 170
A G +G++G +G GI G+ PG+DG GP G G GEKG+ G G G+ G G+
Sbjct: 541 AKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGDQG 600
Query: 171 XXXXXXXXXXXXXXXXRGERGL---DGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG 341
+G +G+ GRPG G +G G G +G G G G PG G
Sbjct: 601 ASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSG 660
Query: 342 DKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G P G G PGP G G +G G
Sbjct: 661 PPGRPGPP--GPPGPPGPSGPSGSNGRNG 687
Score = 85.4 bits (202), Expect = 3e-17
Identities = 51/131 (38%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXRG 224
I G+PG +G G G PG+ GE+G G+ G G G PG RG
Sbjct: 784 IQGKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGPSGPLGANGEPGVQGAKGARG 843
Query: 225 ERGLDGR--PGG-QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP 395
+ G DG+ P G QG G G+KG+RG G G G PG G G P G G GP
Sbjct: 844 DDGKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGEQGPPGVAGTDGPPGP--RGNVGPMGP 901
Query: 396 RGVPGIDGLPG 428
G PG+ G PG
Sbjct: 902 MGDPGLPGPPG 912
Score = 84.6 bits (200), Expect = 5e-17
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Frame = +3
Query: 3 ALGQKGQKGELGREGI---AGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXX 170
A+G++G +GE G G+ G+PG+ G+ G G PG G +G K G G G+PG
Sbjct: 475 AMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPGASG 534
Query: 171 XXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
G G+DG+ G G+ G++G G +G G G G+PG G G
Sbjct: 535 RRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGEAGQPGTNGFNG 594
Query: 351 EPA-AVVYGQKGEPGPRGVPGIDGLPG 428
+ G G GPRG GI G G
Sbjct: 595 KNGDQGASGPTGPVGPRGPGGIKGAKG 621
Score = 83.4 bits (197), Expect = 1e-16
Identities = 51/145 (35%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G +G++G G+ G G+ G G GPTG G TG+ GD+G G G G PG
Sbjct: 462 GPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKP 521
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGA---IGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G RG G G +G +G G G G PG GL G PG +G GE
Sbjct: 522 GTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEK 581
Query: 357 AAVVYGQKGEPGPRGVPGIDGLPGS 431
G+ G+PG G G +G G+
Sbjct: 582 -----GEAGQPGTNGFNGKNGDQGA 601
Score = 82.6 bits (195), Expect = 2e-16
Identities = 59/179 (32%), Positives = 73/179 (40%), Gaps = 19/179 (10%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG---------YGLPG 161
G G G+ G G AG+PG G G G G+ G+ G +GDQGP G G+ G
Sbjct: 16 GPPGDIGDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPGGSTQTAGGIKG 75
Query: 162 EXXXXXXXXXXXXXXXXXXRGE------RGLDGRPGGQGAIGMSGEKGDRGF---PGRSG 314
RG RG DG G +G +G+ GE G G PGR G
Sbjct: 76 PDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGMVGRPGRPG 135
Query: 315 LTGEPGYKGDKGEPAAV-VYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGDR 488
G PG G G V + GQ G GP G PG+ G+ G+ +KG R
Sbjct: 136 FDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKR 194
Score = 79.0 bits (186), Expect = 3e-15
Identities = 50/146 (34%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG----YGLPGEXXXX 176
GQ+G G G G G G G GP G+ G G +G +GD GP G G PG
Sbjct: 10 GQRGPDGPPGDIGDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPG-GSTQ 68
Query: 177 XXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G +G +G PG +G+ G+ G +G G G+ G G PG G G
Sbjct: 69 TAGGIKGPDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAG-- 126
Query: 357 AAVVYGQKGEPGPRGVPGIDGLPGSD 434
+ G+ G PG G PG G PG++
Sbjct: 127 ---MVGRPGRPGFDGAPGAPGSPGAE 149
Score = 79.0 bits (186), Expect = 3e-15
Identities = 54/144 (37%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXX 179
A G KG G G G G PG G+ GP G G G G+ G G VG G PG
Sbjct: 82 AAGIKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGMVGRPGRPG------ 135
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
G+ GL G+ G +G G G +G RG PG G G PG G KG+
Sbjct: 136 FDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRG 195
Query: 360 AVVYGQKGEPGPRGVPGIDGLPGS 431
A G +G PG +G G G GS
Sbjct: 196 AT--GSRGSPGNQGPQGPSGPQGS 217
Score = 78.2 bits (184), Expect = 4e-15
Identities = 54/146 (36%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G KG G GR GI G G G G G G G +G G GP G PG
Sbjct: 618 GAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGR--PGPPGPPGPPG 675
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
G +G GR G G G G G+RG G G GE G G++G P
Sbjct: 676 PSGPSGSNGRNGVKGTPGRDGEPGIPGPDGRPGERGPGGEIGRKGEKGPSGERGYPGKD- 734
Query: 369 YGQKGEP------GPRGVPGIDGLPG 428
G+ GEP GP G PG +GLPG
Sbjct: 735 -GRAGEPGAVGLRGPTGQPGENGLPG 759
Score = 76.6 bits (180), Expect = 1e-14
Identities = 49/134 (36%), Positives = 63/134 (47%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G++G GE G+ G G PG G G G PG+ G KG +GD G G P
Sbjct: 804 GERGSPGEPGKAGKQGPPGPSGPLGANGEPGVQGAKGARGDDGKDGKQGPA--------- 854
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
G +G +G G +G G GEKG++G PG +G G PG +G+ G +
Sbjct: 855 -----------GPQGPNGPQGDKGNRGPRGEKGEQGPPGVAGTDGPPGPRGNVGPMGPM- 902
Query: 369 YGQKGEPGPRGVPG 410
G G PGP G PG
Sbjct: 903 -GDPGLPGPPGPPG 915
Score = 75.8 bits (178), Expect = 2e-14
Identities = 47/143 (32%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G+ G+KGE G G G PG DG G G G+ G G G+ G G +
Sbjct: 714 GEIGRKGEKGPSGERGYPGKDGRAGEPGAVGLRGPTGQPGENGLPGEPVSEHFQMLFLSH 773
Query: 189 XXXXXXXXXX-RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
+G+ G++G G G G+ GE+G G PG++G G PG G
Sbjct: 774 LTVFDKKTSIIQGKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGPSGP------- 826
Query: 366 VYGQKGEPGPRGVPGIDGLPGSD 434
G GEPG +G G G G D
Sbjct: 827 -LGANGEPGVQGAKGARGDDGKD 848
Score = 74.9 bits (176), Expect = 4e-14
Identities = 53/153 (34%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G+ G KG GR+G G PG DG G G G G KG+KG G GY PG+
Sbjct: 684 GRNGVKGTPGRDGEPGIPGPDGRPGERGPGGEIGRKGEKGPSGERGY--PGKDGRAGEPG 741
Query: 189 XXXXXXXXXXRGERGLDGRPGGQ-------GAIGMSGEK-----GDRGFPGRSGLTGEPG 332
GE GL G P + + + +K G G G +G G PG
Sbjct: 742 AVGLRGPTGQPGENGLPGEPVSEHFQMLFLSHLTVFDKKTSIIQGKPGINGTNGRGGIPG 801
Query: 333 YKGDKGEPAAV-VYGQKGEPGPRGVPGIDGLPG 428
KG++G P G++G PGP G G +G PG
Sbjct: 802 LKGERGSPGEPGKAGKQGPPGPSGPLGANGEPG 834
Score = 73.7 bits (173), Expect = 1e-13
Identities = 52/144 (36%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY----------GLP 158
G +G +G G EG G PGN G +G G G G G++G QGP G G P
Sbjct: 168 GLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRP 227
Query: 159 GEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYK 338
GE G RG G PG G G +G GDRG G G G PG
Sbjct: 228 GEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGPNGSPGPRGAPGPP 287
Query: 339 GDKGEPAAVVYGQKGEPGPRGVPG 410
G +G+ G+ G GP G PG
Sbjct: 288 GKRGK-----IGRVGPMGPIGDPG 306
Score = 73.7 bits (173), Expect = 1e-13
Identities = 48/142 (33%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLPGEXXXXXX 182
+G+KG+KG G G G+ G G G G G TG+ G+ G G PV
Sbjct: 716 IGRKGEKGPSGERGYPGKDGRAGEPGAVGLRGPTGQPGENGLPGEPVSEHF---QMLFLS 772
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
+G+ G++G G G G+ GE+G G PG++G G PG G G A
Sbjct: 773 HLTVFDKKTSIIQGKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGPSGPLG--AN 830
Query: 363 VVYGQKGEPGPRGVPGIDGLPG 428
G +G G RG G DG G
Sbjct: 831 GEPGVQGAKGARGDDGKDGKQG 852
Score = 65.7 bits (153), Expect = 3e-11
Identities = 42/108 (38%), Positives = 49/108 (45%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
LG G+ G G +G G G DG QGP G G G +GDKG++GP G GE
Sbjct: 827 LGANGEPGVQGAKGARGDDGKDGKQGPAGPQGPNGPQGDKGNRGP--RGEKGE------- 877
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP 329
G G DG PG +G +G G GD G PG G G P
Sbjct: 878 --------QGPPGVAGTDGPPGPRGNVGPMGPMGDPGLPGPPGPPGPP 917
Score = 65.3 bits (152), Expect = 3e-11
Identities = 42/124 (33%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G KG+ G G G PGN G QGP+G G G+ G G G G LPG+
Sbjct: 186 GNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPG--LPGDKGAMGGPG 243
Query: 189 XXXXXXXXXXRGERGLDGRPGG------QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
G G+ G PG +G G G +G G PG+ G G G G G
Sbjct: 244 PAGQPGIRGPSGAPGITGNPGATGINGDRGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIG 303
Query: 351 EPAA 362
+P +
Sbjct: 304 DPGS 307
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 27/99 (27%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGD------RGFPGRSGLTGEPGYKGDKG---------- 350
+G+RG DG PG G G SGE G G PG G+ G+PG +GD+G
Sbjct: 9 KGQRGPDGPPGDIGDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPGGSTQ 68
Query: 351 --------EP---AAVVYGQKGEPGPRGVPGIDGLPGSD 434
+P AA + G G PGPRG PG+ G GSD
Sbjct: 69 TAGGIKGPDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSD 107
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGE 164
A+G G G+ G G +G PG G G T GI G++G G GP G G PG+
Sbjct: 238 AMGGPGPAGQPGIRGPSGAPGITGNPGAT---GINGDRGPNGSPGPRGAPGPPGK 289
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 427 PGRPSIPGTPRGPGSP 380
PGRP G P PGSP
Sbjct: 131 PGRPGFDGAPGAPGSP 146
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 96.3 bits (229), Expect = 2e-20
Identities = 60/147 (40%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLPGEXXXXXXX 185
G +G+KGE G +G G PG GA G G PG+ G G +G G P G+ G+
Sbjct: 867 GPRGKKGEAGSDGRPGFPGESGANGLPGPPGLAGSPGPRGPNGEPGDPGMDGDKGPPGPV 926
Query: 186 XXXXXXXXXXXR-----GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
G GLDG PG GA G SG+ G R G GL+G PG+ G G
Sbjct: 927 DAGPRGPPGEPGPPGPFGAAGLDGMPGKPGAKGESGQPGMR---GADGLSGPPGFDGQAG 983
Query: 351 EPAAVVYGQKGEPGPRGVPGIDGLPGS 431
E A+ G KGEPG G+PG GL GS
Sbjct: 984 ETGAI--GFKGEPGTPGIPGFPGLTGS 1008
Score = 90.6 bits (215), Expect = 8e-19
Identities = 59/146 (40%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPG---NDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXX 179
G+ G GE G G+ G PG + G +GP G PG G GDKG GPV G G
Sbjct: 879 GRPGFPGESGANGLPGPPGLAGSPGPRGPNGEPGDPGMDGDKGPPGPVDAGPRGPPGEPG 938
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
G GLDG PG GA G SG+ G RG GL+G PG+ G GE
Sbjct: 939 PPGPF---------GAAGLDGMPGKPGAKGESGQPGMRG---ADGLSGPPGFDGQAGETG 986
Query: 360 AVVY-GQKGEPGPRGVPGIDGLPGSD 434
A+ + G+ G PG G PG+ G G D
Sbjct: 987 AIGFKGEPGTPGIPGFPGLTGSSGRD 1012
Score = 89.8 bits (213), Expect = 1e-18
Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+G++G G G G+ G PG +G G TG PGI G G KG+ G G PGE
Sbjct: 464 IGEQGAIGFKGLRGMTGNPGPNGPAGATGPPGIPGFPGQKGEPGISRPGPPGENGAFGLP 523
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEK-----GDRGFPGRSGLTGEPG--YKGD 344
G GL G+ G +G +G G G +GF G+ G G+PG G+
Sbjct: 524 GRKGDSGDRGPDGNPGLPGQKGDKGLLGPIGPPGRGGVGSQGFQGQKGFKGDPGDAIPGN 583
Query: 345 KGEPAAVVY---GQKGEPGPRGVPGIDGLPGSD 434
G+P + + Q+GEPG G PG+ G G+D
Sbjct: 584 PGDPGVMGFPGEPQRGEPGDPGRPGLPGQTGAD 616
Score = 83.4 bits (197), Expect = 1e-16
Identities = 54/145 (37%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGF-----PGITGEKGDKGDQGPVGYGLPGEXXX 173
G+ G G +G +G G PG G +GP PG G KG +G+ GP G PGE
Sbjct: 188 GEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGETGP--RGRPGEPGA 245
Query: 174 XXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
RGE GLDG PG +G G GE+G G G+ GL E
Sbjct: 246 DGVRGPDGSTGE---RGETGLDGAPGKKGEDGTKGEQGVPGAKGQPGLDREEVVMPPGES 302
Query: 354 PAAVVYGQKGEPGPRGVPGIDGLPG 428
AA G G PGP+G PG G G
Sbjct: 303 GAAGDLGPDGPPGPKGAPGAPGFSG 327
Score = 83.4 bits (197), Expect = 1e-16
Identities = 52/144 (36%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+ + G GE G G+ G+ G+ G +GP G PG+ G+KGDKG GP+ G PG
Sbjct: 508 ISRPGPPGENGAFGLPGRKGDSGDRGPDGNPGLPGQKGDKGLLGPI--GPPGR----GGV 561
Query: 186 XXXXXXXXXXXRGERG--LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+G+ G + G PG G +G GE RG PG G G PG G G P
Sbjct: 562 GSQGFQGQKGFKGDPGDAIPGNPGDPGVMGFPGEP-QRGEPGDPGRPGLPGQTGADGPPG 620
Query: 360 AV-VYGQKGEPGPRGVPGIDGLPG 428
+ G G GP+G G +G+ G
Sbjct: 621 MIGPRGPDGNNGPQGEGGPNGIKG 644
Score = 82.6 bits (195), Expect = 2e-16
Identities = 54/149 (36%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKG--DKGDQGPVG-YGLPGEXXX 173
A+G KG +G G G G G G G GFPG GE G G G G +GLPG
Sbjct: 469 AIGFKGLRGMTGNPGPNGPAGATGPPGIPGFPGQKGEPGISRPGPPGENGAFGLPGRKGD 528
Query: 174 XXXXXXXXXXXXXXXRGERGLDG--RPGGQGAIGMSGEKGDRGFPGRSG--LTGEPGYKG 341
+G++GL G P G+G +G G +G +GF G G + G PG G
Sbjct: 529 SGDRGPDGNPGLPGQKGDKGLLGPIGPPGRGGVGSQGFQGQKGFKGDPGDAIPGNPGDPG 588
Query: 342 DKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G P G+ G+PG G+PG G G
Sbjct: 589 VMGFPGEPQRGEPGDPGRPGLPGQTGADG 617
Score = 81.4 bits (192), Expect = 5e-16
Identities = 53/153 (34%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXX 179
A G G G G +G G PG G +G G G G+ GD G G GY G+PG
Sbjct: 304 AAGDLGPDGPPGPKGAPGAPGFSGIEGLKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPG 363
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFP----------GRSGLTGEP 329
GE+G G PG G IG +G +G++G P G G +G
Sbjct: 364 QKGDPPRFVPVPDHGEKGQSGEPGFPGEIGEAGTQGEKGNPPPTPIIIKYKGPKGTSGAQ 423
Query: 330 GYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G +G +G G+ G+ GP+G+PG DGL G
Sbjct: 424 GKEGPRGPD-----GRDGQSGPKGLPGDDGLKG 451
Score = 81.0 bits (191), Expect = 6e-16
Identities = 54/155 (34%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G++G+ G G G G G GP G PG+ GE+G G GP G G PG
Sbjct: 12 GVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSR 71
Query: 186 XXXXXXXXXXXRGERGLD--GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD----- 344
+G G G PG G G G +G G PG G+ G G KGD
Sbjct: 72 GDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLG 131
Query: 345 -KGEPAAV------VYGQKGEPGPRGVPGIDGLPG 428
KG+P + G G PG +G+PG+ G PG
Sbjct: 132 PKGQPGSPGIDIPGPKGMDGPPGEKGLPGVQGDPG 166
Score = 79.8 bits (188), Expect = 1e-15
Identities = 51/148 (34%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G++GE G +G G+ G DG +G G PG G+ G ++ + PGE
Sbjct: 253 GSTGERGETGLDGAPGKKGEDGTKGEQGVPGAKGQPGLDREEVVMP---PGESGAAGDLG 309
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD---KGEPA 359
G G G G +G G G+ GD G G SG G PG KGD KG+P
Sbjct: 310 PDGPPGPKGAPGAPGFSGIEGLKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDPP 369
Query: 360 AVV----YGQKGEPGPRGVPGIDGLPGS 431
V +G+KG+ G G PG G G+
Sbjct: 370 RFVPVPDHGEKGQSGEPGFPGEIGEAGT 397
Score = 78.6 bits (185), Expect = 3e-15
Identities = 53/142 (37%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-------GLPGEX 167
G G G G G G PG DG +GP G P G +G G+ GP G G+PG+
Sbjct: 897 GLAGSPGPRGPNGEPGDPGMDGDKGPPG-PVDAGPRGPPGEPGPPGPFGAAGLDGMPGKP 955
Query: 168 XXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDK 347
G G DG+ G GAIG GE G G PG GLTG G G
Sbjct: 956 GAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGEPGTPGIPGFPGLTGSSGRDGLD 1015
Query: 348 GEPAAVVYGQKGEPGPRGVPGI 413
G P G PGP G GI
Sbjct: 1016 GSP--------GRPGPSGRIGI 1029
Score = 77.4 bits (182), Expect = 8e-15
Identities = 59/154 (38%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A+G+KG G LG +G G PG D GP G G GEKG G QG G P
Sbjct: 120 AMGKKGDTGPLGPKGQPGSPGID-IPGPKGMDGPPGEKGLPGVQGDPGIKGP----KAEP 174
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDR-----------GFPGRSGLTGEP 329
+GE G G G QG IG G G + G PG G GE
Sbjct: 175 PFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGET 234
Query: 330 GYKGDKGEPAA-VVYGQKGEPGPRGVPGIDGLPG 428
G +G GEP A V G G G RG G+DG PG
Sbjct: 235 GPRGRPGEPGADGVRGPDGSTGERGETGLDGAPG 268
Score = 77.0 bits (181), Expect = 1e-14
Identities = 54/140 (38%), Positives = 62/140 (44%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G KG G G+EG G G DG GP G PG D G +GP G GLPG+
Sbjct: 415 GPKGTSGAQGKEGPRGPDGRDGQSGPKGLPG------DDGLKGPPGDGLPGKP------- 461
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
G G G G +G GM+G G G G +G G PG+ G KGEP
Sbjct: 462 -----------GLIGEQGAIGFKGLRGMTGNPGPNGPAGATGPPGIPGFPGQKGEPGISR 510
Query: 369 YGQKGEPGPRGVPGIDGLPG 428
G GE G G+PG G G
Sbjct: 511 PGPPGENGAFGLPGRKGDSG 530
Score = 75.4 bits (177), Expect = 3e-14
Identities = 49/143 (34%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Frame = +3
Query: 24 KGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXX 200
+G G +G AG PG +G GP G PG G G G++G G G G+
Sbjct: 11 QGVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGS 70
Query: 201 XXXXXXRGERGLDGRPGGQ-----GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G G G PG Q G +G +G G +G PG G+ G G G KG+ +
Sbjct: 71 RGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPL 130
Query: 366 VYGQKGEPGPRG--VPGIDGLPG 428
G KG+PG G +PG G+ G
Sbjct: 131 --GPKGQPGSPGIDIPGPKGMDG 151
Score = 71.7 bits (168), Expect = 4e-13
Identities = 47/130 (36%), Positives = 52/130 (40%)
Frame = +3
Query: 39 REGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXX 218
++G G GN G QGP G PG G KG K G PG
Sbjct: 186 KKGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGETGPRGRPGEPGA 245
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
G RG DG G +G G+ G G +G G G G PG KG G V GE G
Sbjct: 246 DGVRGPDGSTGERGETGLDGAPGKKGEDGTKGEQGVPGAKGQPGLDREEVVMPPGESGAA 305
Query: 399 GVPGIDGLPG 428
G G DG PG
Sbjct: 306 GDLGPDGPPG 315
Score = 65.7 bits (153), Expect = 3e-11
Identities = 50/124 (40%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +3
Query: 63 GNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXXXXRGERGLD 239
G G QG G PG G G +G GP G GLPGE RG G+
Sbjct: 12 GVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGE------------------RGTGGVP 53
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G G QGA G GFPG G TG+ G G KG P A YG G G G PG G
Sbjct: 54 GPKGKQGA------PGTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQG 107
Query: 420 LPGS 431
PG+
Sbjct: 108 SPGA 111
Score = 62.1 bits (144), Expect = 3e-10
Identities = 49/159 (30%), Positives = 61/159 (38%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G +G+ G G G+PG G G G PG G G G +GP G
Sbjct: 864 GDNGPRGKKGEAGSDGRPGFPGESGANGLPGPPGLAGSPGPRGPNG-------------- 909
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
G+ G+DG G G + +G +G G PG G G G G G+P
Sbjct: 910 ---------EPGDPGMDGDKGPPGPVD-AGPRGPPGEPGPPGPFGAAGLDGMPGKP---- 955
Query: 369 YGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGD 485
G KGE G G+ G DGL G KG+
Sbjct: 956 -GAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGE 993
Score = 61.3 bits (142), Expect = 5e-10
Identities = 39/113 (34%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +3
Query: 9 GQKGQKG--ELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXX 179
G KG G + G G G+PG G G G G+ G+ G KG+ G G G G
Sbjct: 918 GDKGPPGPVDAGPRGPPGEPGPPGPFGAAGLDGMPGKPGAKGESGQPGMRGADGLSGPPG 977
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYK 338
+GE G G PG G G SG G G PGR G +G G +
Sbjct: 978 FDGQAGETGAIGFKGEPGTPGIPGFPGLTGSSGRDGLDGSPGRPGPSGRIGIR 1030
Score = 59.3 bits (137), Expect = 2e-09
Identities = 45/144 (31%), Positives = 51/144 (35%), Gaps = 4/144 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G+ G G +G G PG G G G G TG G KG G G +PG
Sbjct: 95 GPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPG 154
Query: 189 XXXXXXXXXXRGERGLDGRPG----GQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G +G P G+ GE G G G G G PG G KG
Sbjct: 155 EKGLPGVQGDPGIKGPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPGPKGPK 214
Query: 357 AAVVYGQKGEPGPRGVPGIDGLPG 428
G PGP+G G G G
Sbjct: 215 DTCPRCPPGPPGPKGKRGETGPRG 238
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/67 (44%), Positives = 33/67 (49%)
Frame = +3
Query: 228 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVP 407
RG G G +G G +G G GFPG SG G PG G G P G GEPG G+
Sbjct: 860 RGPPGDNGPRGKKGEAGSDGRPGFPGESGANGLPGPPGLAGSPGP--RGPNGEPGDPGMD 917
Query: 408 GIDGLPG 428
G G PG
Sbjct: 918 GDKGPPG 924
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/90 (34%), Positives = 38/90 (42%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A G G G+ G +G +GQPG GA G +G PG G+ G+ G G GE
Sbjct: 945 AAGLDGMPGKPGAKGESGQPGMRGADGLSGPPGFDGQAGETG-----AIGFKGEPGTPGI 999
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGM 272
G G GRPG G IG+
Sbjct: 1000 PGFPGLTGSSGRDGLDGSPGRPGPSGRIGI 1029
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +3
Query: 252 GQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G GA+ G D G P + ++G PG +GD G P+ VV G G+PG G G +GLPG
Sbjct: 1382 GTGAVSGLGPMVDHGGPPGT-ISGPPGIRGDPGIPS-VVRGPPGKPGLSGNKGKEGLPGD 1439
Query: 432 D 434
D
Sbjct: 1440 D 1440
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/62 (45%), Positives = 30/62 (48%)
Frame = +3
Query: 249 GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G G G G+KG+ G GR G GE G G G P G G PGPRG G G PG
Sbjct: 861 GPPGDNGPRGKKGEAGSDGRPGFPGESGANGLPGPP-----GLAGSPGPRGPNGEPGDPG 915
Query: 429 SD 434
D
Sbjct: 916 MD 917
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +3
Query: 222 GERGLDGRP----GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G RG G P G G G+SG KG G PG G+ G+PG G G+
Sbjct: 1407 GIRGDPGIPSVVRGPPGKPGLSGNKGKEGLPGDDGVPGQPGPPGPPGD 1454
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGND------GAQGPTGFPGITGEKGDKGDQGPVGYGLPGE 164
Q+G+ G+ GR G+ GQ G D G +GP G G GE G G +G G L G+
Sbjct: 597 QRGEPGDPGRPGLPGQTGADGPPGMIGPRGPDGNNGPQGEGGPNGIKGKPGNILCGQ 653
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGL 155
G G+PG G +G G PG G G G GP G G+
Sbjct: 1420 GPPGKPGLSGNKGKEGLPGDDGVPGQPGPPGPPGDGI 1456
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIA-GQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G +G+ G + G PG G G G G+ G+ G G GP G
Sbjct: 1404 GPPGIRGDPGIPSVVRGPPGKPGLSGNKGKEGLPGDDGVPGQPGPPG 1450
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGE 113
G G+ G G +G G PG+DG G G PG G+
Sbjct: 1420 GPPGKPGLSGNKGKEGLPGDDGVPGQPGPPGPPGD 1454
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGN 68
G G +GE G GI G+PGN
Sbjct: 629 GNNGPQGEGGPNGIKGKPGN 648
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 95.9 bits (228), Expect = 2e-20
Identities = 58/148 (39%), Positives = 74/148 (50%), Gaps = 8/148 (5%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGNDGA---QGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXX 179
QKG+ G G +G +G PG DG+ GPTG PG G KGD+G+ G VG G G+
Sbjct: 3591 QKGETGTTGVKGESGTPGLDGSPGKDGPTGSPGDPGSKGDRGETGDVGAAGAKGDKGDVG 3650
Query: 180 XXXXXXXXXXXXXRGERGLDGRP---GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
+GE G G P Q + G+KG+RGFPG +G GE G +G +G
Sbjct: 3651 PVGIRGFKGNKGMKGEVGPPGPPERIDNQTLLAAKGDKGERGFPGNNGGKGERGAQGPRG 3710
Query: 351 EPAAV-VYGQKGEPGPRGVPGIDGLPGS 431
E G +G GPRG G G+ GS
Sbjct: 3711 EKGNTGAPGSQGSTGPRGPIGQPGMAGS 3738
Score = 95.1 bits (226), Expect = 4e-20
Identities = 57/150 (38%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-------GLPGEX 167
G G G+ G G G PG+ G +G TG G G KGDKGD GPVG G+ GE
Sbjct: 3608 GLDGSPGKDGPTGSPGDPGSKGDRGETGDVGAAGAKGDKGDVGPVGIRGFKGNKGMKGEV 3667
Query: 168 ---XXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYK 338
+GERG G GG+G G G +G++G G G G G +
Sbjct: 3668 GPPGPPERIDNQTLLAAKGDKGERGFPGNNGGKGERGAQGPRGEKGNTGAPGSQGSTGPR 3727
Query: 339 GDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G G+P + G +GE G +G PG GLPG
Sbjct: 3728 GPIGQPG--MAGSQGEKGGKGDPGFPGLPG 3755
Score = 83.0 bits (196), Expect = 2e-16
Identities = 56/156 (35%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPG---------ITGEKGDKGDQG-PVGYG 152
A G KG KG++G GI G GN G +G G PG + KGDKG++G P G
Sbjct: 3639 AAGAKGDKGDVGPVGIRGFKGNKGMKGEVGPPGPPERIDNQTLLAAKGDKGERGFPGNNG 3698
Query: 153 LPGEXXXXXXXXXXXXXXXXXXRGE---RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTG 323
GE +G RG G+PG G+ G G KGD GFPG G G
Sbjct: 3699 GKGERGAQGPRGEKGNTGAPGSQGSTGPRGPIGQPGMAGSQGEKGGKGDPGFPGLPGQAG 3758
Query: 324 EPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G +G +G+ ++ G G PG G G+ G P +
Sbjct: 3759 LRGLQGPEGQKGSI--GAPGIPGKIGEKGVPGRPST 3792
Score = 81.8 bits (193), Expect = 4e-16
Identities = 55/146 (37%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXX 182
L KG KGE G G G G GAQGP G G TG G +G GP G G PG
Sbjct: 3682 LAAKGDKGERGFPGNNGGKGERGAQGPRGEKGNTGAPGSQGSTGPRGPIGQPG------- 3734
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
+G+ G G PG G G+ G +G +G G G+ G+ G KG G P+
Sbjct: 3735 --MAGSQGEKGGKGDPGFPGLPGQAGLRGLQGPEGQKGSIGAPGIPGKIGEKGVPGRPST 3792
Query: 363 VVYGQKGEPGP----RGVPGIDGLPG 428
+ G G PG G PG G PG
Sbjct: 3793 IA-GPPGPPGRSKNISGPPGPQGPPG 3817
Score = 80.6 bits (190), Expect = 8e-16
Identities = 53/146 (36%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+G G G G+ G G PG +G GP GFPG+ G G++G G G PG+
Sbjct: 3467 IGPPGLAGSPGQTGAPGIPGRNGTAGPPGFPGLKGSPGERGLSGI--DGPPGDAGPVGPR 3524
Query: 186 XXXXXXXXXXXRGERGL--DGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
GE G +G G G IG +G KG++G G G YK + E
Sbjct: 3525 GINGIQGSQGVPGEPGPAGNGEKGAIGPIGPAGTKGNKGELGSKGEKYNYHYKDTEQERL 3584
Query: 360 AV-VYGQKGEPGPRGVPGIDGLPGSD 434
A+ Y QKGE G GV G G PG D
Sbjct: 3585 ALKSYQQKGETGTTGVKGESGTPGLD 3610
Score = 79.4 bits (187), Expect = 2e-15
Identities = 55/147 (37%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITG---EKGDKGDQGPVGYGLPGEXXXXX 179
G +G +GE G G G G+ G +GP G PG+ G EKG KGD G GLPG+
Sbjct: 3704 GAQGPRGEKGNTGAPGSQGSTGPRGPIGQPGMAGSQGEKGGKGDPG--FPGLPGQAGLRG 3761
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGM-SGEKGDRGFPGRS-GLTGEPGYKGDKGE 353
G G+ G+ G +G G S G G PGRS ++G PG +G G+
Sbjct: 3762 LQGPEGQKGSI---GAPGIPGKIGEKGVPGRPSTIAGPPGPPGRSKNISGPPGPQGPPGQ 3818
Query: 354 PAAVVYGQKGEPGPRGVPGIDGLPGSD 434
+ + G PGP+G PG G PG D
Sbjct: 3819 ASQI----PGPPGPQGPPGPPGPPGRD 3841
Score = 75.8 bits (178), Expect = 2e-14
Identities = 52/141 (36%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G KG+KGE E P G +G G PG G KG+ G GP G G PG+
Sbjct: 3427 GLKGEKGEPA-ESTNVNPFTKGVKGEPGVPGFPGLKGEIGLIGPPGLAGSPGQTGAPGIP 3485
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G GL G PG +G G+ G GD G G G+ G G +G GEP
Sbjct: 3486 GRNGTAGPP---GFPGLKGSPGERGLSGIDGPPGDAGPVGPRGINGIQGSQGVPGEPGPA 3542
Query: 366 VYGQKGEPGPRGVPGIDGLPG 428
G+KG GP G G G G
Sbjct: 3543 GNGEKGAIGPIGPAGTKGNKG 3563
Score = 71.3 bits (167), Expect = 5e-13
Identities = 58/153 (37%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGI--TGEKGDKGDQGPVGYGLPGEXXXXXX 182
G KG KG+ G G+ G PG G G G PG G G KG+QG G PG
Sbjct: 3325 GLKGIKGDKGFPGMVGFPGLRGKTGLPGKPGKGKPGPTGPKGEQGRSISGPPGPPGAPGT 3384
Query: 183 XXXXXXXXXXXXRGE-RGLDGRPGGQG-AIGMSGEKGDRGFPGRSGLTGEPG-------- 332
L G PG G A ++G G RGFPG G GEP
Sbjct: 3385 SWNDSIVNGGLSNSLLESLRGPPGPPGPASTVAGPVGTRGFPGLKGEKGEPAESTNVNPF 3444
Query: 333 YKGDKGEPAAVVY-GQKGEPGPRGVPGIDGLPG 428
KG KGEP + G KGE G G PG+ G PG
Sbjct: 3445 TKGVKGEPGVPGFPGLKGEIGLIGPPGLAGSPG 3477
Score = 67.7 bits (158), Expect = 6e-12
Identities = 50/159 (31%), Positives = 59/159 (37%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G KG GE G GI G PG+ G GP G GI G +G G+ GP G G G
Sbjct: 3498 GLKGSPGERGLSGIDGPPGDAGPVGPRGINGIQGSQGVPGEPGPAGNGEKG------AIG 3551
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
+GE G G E+ + G TG G KG+ G P +
Sbjct: 3552 PIGPAGTKGNKGELGSKGEKYNYHYKDTEQERLALKSYQQKGETGTTGVKGESGTPG--L 3609
Query: 369 YGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGD 485
G G+ GP G PG G G KGD
Sbjct: 3610 DGSPGKDGPTGSPGDPGSKGDRGETGDVGAAGAKGDKGD 3648
Score = 60.5 bits (140), Expect = 1e-09
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Frame = +3
Query: 99 GITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGE---RGLDGRPGGQGAIG 269
G GEKGD+G GP + + R L G G QG G
Sbjct: 3266 GAKGEKGDRGLPGPAVFIATNSTVVTVKGQKGDAGTCSSNCSQQVIRVLKGEQGPQGPPG 3325
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPG--IDGLPG 428
+ G KGD+GFP G+ G PG +G G P G+ G GP+G G I G PG
Sbjct: 3326 LKGIKGDKGFP---GMVGFPGLRGKTGLPGKPGKGKPGPTGPKGEQGRSISGPPG 3377
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 95.5 bits (227), Expect = 3e-20
Identities = 58/149 (38%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG----YGLPGEXXXX 176
G G +GE G +G G G G +G G PG G KG +GD+GPVG G PG
Sbjct: 125 GNHGVQGERGSQGGRGIKGGRGNEGSAGIPGRAGNKGGRGDRGPVGPVGVIGNPGLMGIQ 184
Query: 177 XXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGF---PGRSGLTGEPGYKGDK 347
RG+ GL G PG +G G +G G RG PGR G G+PG G
Sbjct: 185 GSEGPYGPQGMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLPGPPGRRGKRGDPGSDGIP 244
Query: 348 GEPA-AVVYGQKGEPGPRGVPGIDGLPGS 431
GE + G +GEPG G PG+ G G+
Sbjct: 245 GERGDRGILGVQGEPGKDGSPGLKGTRGT 273
Score = 89.8 bits (213), Expect = 1e-18
Identities = 53/140 (37%), Positives = 67/140 (47%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G +G GR+G+ G+ G +G GP G PG G +G KG+ G GLPG
Sbjct: 77 GPAGVQGMEGRQGVQGKDGEEGPPGPNGAPGRPGVRGPKGESG--SRGLPGN---HGVQG 131
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
+G RG +G G G G G +GDRG G G+ G PG G +G
Sbjct: 132 ERGSQGGRGIKGGRGNEGSAGIPGRAGNKGGRGDRGPVGPVGVIGNPGLMGIQGSEGP-- 189
Query: 369 YGQKGEPGPRGVPGIDGLPG 428
YG +G G RG PG+ G PG
Sbjct: 190 YGPQGMTGDRGKPGLVGDPG 209
Score = 87.0 bits (206), Expect = 1e-17
Identities = 52/144 (36%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A+G G G GR G G G G GP G+ G G +GD+G+ GLPG+
Sbjct: 12 AIGNPGPMGLKGRRGPRGMRGKAGMSGPKGYSGEKGMQGDRGEN-----GLPGKLGHQGK 66
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA- 359
G +G++GR G QG G G G G PGR G+ G G G +G P
Sbjct: 67 RGRRGKPGPEGPAGVQGMEGRQGVQGKDGEEGPPGPNGAPGRPGVRGPKGESGSRGLPGN 126
Query: 360 AVVYGQKGEPGPRGVPGIDGLPGS 431
V G++G G RG+ G G GS
Sbjct: 127 HGVQGERGSQGGRGIKGGRGNEGS 150
Score = 67.3 bits (157), Expect = 8e-12
Identities = 51/161 (31%), Positives = 65/161 (40%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+G+ G G LG G G G G +GP G G G G KG G G + G+
Sbjct: 1 MGESGDPGRLGAIGNPGPMGLKGRRGPRGMRGKAGMSGPKGYSGEKG--MQGD------- 51
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
RGE GL G+ G QG G G+ G G G G+ G G +G GE
Sbjct: 52 -----------RGENGLPGKLGHQGKRGRRGKPGPEGPAGVQGMEGRQGVQGKDGE---- 96
Query: 366 VYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGDR 488
+G PGP G PG G+ G ++G+R
Sbjct: 97 ----EGPPGPNGAPGRPGVRGPKGESGSRGLPGNHGVQGER 133
Score = 67.3 bits (157), Expect = 8e-12
Identities = 46/132 (34%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G +G +G +G G+ G PG G QG G G G GD+G G VG G G
Sbjct: 161 GGRGDRGPVGPVGVIGNPGLMGIQGSEGPYGPQGMTGDRGKPGLVGDPGKKGMAGRAGAM 220
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
RG+RG PG G G G++G G G G G PG KG +G
Sbjct: 221 GMRGLPGPPGRRGKRGD---PGSDGIPGERGDRGILGVQGEPGKDGSPGLKGTRG----- 272
Query: 366 VYGQKGEPGPRG 401
G++GE G +G
Sbjct: 273 TRGKRGERGRKG 284
Score = 67.3 bits (157), Expect = 8e-12
Identities = 47/130 (36%), Positives = 62/130 (47%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXR 221
+G+AG G G +GPTG G+ G+ G+ G GP G GE +
Sbjct: 1098 QGVAGDIGVSGVRGPTGEQGVQGQSGETGGLGPT--GPVGE------------------Q 1137
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G GL G+PG G G+ G KG PG G G G G+ G ++G+ G+PG +G
Sbjct: 1138 GSYGLPGKPGSPGTKGLPGPKGG---PGPGGTRGPVGEAGEDG-----LHGKDGKPGTQG 1189
Query: 402 VPGIDGLPGS 431
V G DG GS
Sbjct: 1190 VSGNDGPIGS 1199
Score = 60.1 bits (139), Expect = 1e-09
Identities = 42/117 (35%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY----GLPGEXXX 173
+G G G +G +G G G G G G PG+ G+ G KG G G GLPG
Sbjct: 172 VGVIGNPGLMGIQGSEGPYGPQGMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLPGPPGR 231
Query: 174 XXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD 344
RG+RG+ G G G G G KG RG G+ GE G KGD
Sbjct: 232 RGKRGDPGSDGIPGERGDRGILGVQGEPGKDGSPGLKGTRGTRGK---RGERGRKGD 285
Score = 58.8 bits (136), Expect = 3e-09
Identities = 37/107 (34%), Positives = 45/107 (42%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G++G +G+ G G G G G QG G PG G G KG GP G PG
Sbjct: 1114 GEQGVQGQSGETGGLGPTGPVGEQGSYGLPGKPGSPGTKGLPGPKGGPGPG--------G 1165
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP 329
G G DG+PG QG G G G G G+ ++G P
Sbjct: 1166 TRGPVGEAGEDGLHGKDGKPGTQGVSGNDGPIGSPGLQGKRAMSGYP 1212
Score = 57.6 bits (133), Expect = 7e-09
Identities = 41/137 (29%), Positives = 54/137 (39%), Gaps = 15/137 (10%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-------------- 146
G+ G G GR+G+ G G+DG G G G+ G G +G G +G
Sbjct: 410 GRTGYPGRNGRQGMPGADGDDGVPGSAGLMGVRGPVGPEGLPGAIGPVVCMGITSYRTCG 469
Query: 147 -YGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTG 323
Y P + G GL G+PG G+ G +G +G G G G TG
Sbjct: 470 TYEYPVDEWIPCGTYGYPVGASGPTGG-MGLIGKPGEMGSSGPAGPQGSAGPRGEQGFTG 528
Query: 324 EPGYKGDKGEPAAVVYG 374
PG G G+ V G
Sbjct: 529 NPGPDGKNGKNVLVGLG 545
Score = 55.6 bits (128), Expect = 3e-08
Identities = 49/145 (33%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A+G +G+ G GR G G PG DG G G G+ G +G G +G LPG
Sbjct: 405 AMGSRGRTGYPGRNGRQGMPGADGDDGVPGSAGLMGVRGPVGPEG-----LPGAIGPVVC 459
Query: 183 XXXXXXXXXXXXRGERGLDGR-PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
E +D P G + G G G GL G+PG G G PA
Sbjct: 460 MGITSYRTCGTY--EYPVDEWIPCGTYGYPV----GASGPTGGMGLIGKPGEMGSSG-PA 512
Query: 360 AVVYGQKGEPGPRGVPGIDGLPGSD 434
G +G GPRG G G PG D
Sbjct: 513 ----GPQGSAGPRGEQGFTGNPGPD 533
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
A+G +G G GR G G PG+DG G G GI G +G+ G G G
Sbjct: 219 AMGMRGLPGPPGRRGKRGDPGSDGIPGERGDRGILGVQGEPGKDGSPG 266
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G +G G G+ G+ G GP G G GE+G G+ GP G
Sbjct: 488 VGASGPTGGMGLIGKPGEMGSSGPAGPQGSAGPRGEQGFTGNPGPDG 534
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD 344
G G QG IG +G++G RG G +G +G+PG KG+
Sbjct: 664 GLRGPQGDIGANGDRGKRGERGPNGQSGKPGAKGE 698
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
+G+ G+ G G++G G G G GP G PG+ G++ G
Sbjct: 1170 VGEAGEDGLHGKDGKPGTQGVSGNDGPIGSPGLQGKRAMSG 1210
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 66 NDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPG 161
+ G +GP G G G++G +G++GP G G PG
Sbjct: 662 SQGLRGPQGDIGANGDRGKRGERGPNGQSGKPG 694
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGD 122
+G +G G G G G G +GP G G G KG+
Sbjct: 663 QGLRGPQGDIGANGDRGKRGERGPNGQSGKPGAKGE 698
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDG 74
A G +G++GE G G +G+PG G
Sbjct: 674 ANGDRGKRGERGPNGQSGKPGAKG 697
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 93.9 bits (223), Expect = 8e-20
Identities = 56/151 (37%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG----YGLPGEXXXX 176
G +G G G G+AG+PG G QGP G PG GE G+ G G G G PG
Sbjct: 127 GDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQP 186
Query: 177 XXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGF------PGRSGLTGEPGYK 338
+G +G +GR G +G++G G KG +G G +G+ G PG
Sbjct: 187 GAIGSPGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGPQGSRGPVGPRGANGVPGSPGAD 246
Query: 339 GDKGEPAA-VVYGQKGEPGPRGVPGIDGLPG 428
GD GE G KG+ G G+PG DG+PG
Sbjct: 247 GDTGEAGEHGADGLKGDRGADGLPGEDGIPG 277
Score = 90.6 bits (215), Expect = 8e-19
Identities = 55/156 (35%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Frame = +3
Query: 33 LGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG----YGLPGEXXXXXXXXXXXX 200
+G G+ G+ G+ G G G PG+ GE G+ G QGP G G PGE
Sbjct: 117 VGIPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGT 176
Query: 201 XXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQK 380
RG+ G G PG G G G +G G GR G GE G KG + G +
Sbjct: 177 AGPPGVRGQPGAIGSPGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGPQ--------GSR 228
Query: 381 GEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGDR 488
G GPRG G+ G PG+D +KGDR
Sbjct: 229 GPVGPRGANGVPGSPGADGDTGEAGEHGADGLKGDR 264
Score = 78.2 bits (184), Expect = 4e-15
Identities = 45/122 (36%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXX 179
A G G G+ G +G+ G+PGN GA G G PG G+ G++G+ G G G PG
Sbjct: 380 APGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPGAQGERG 439
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
GE G DG PG G G G G G G +G G PG G KG+
Sbjct: 440 PRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGAPGPVGNAGSPGSPGPSGPKGDSC 499
Query: 360 AV 365
+V
Sbjct: 500 SV 501
Score = 71.3 bits (167), Expect = 5e-13
Identities = 46/118 (38%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Frame = +3
Query: 78 QGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQ 257
QG G PG G G KGDQG G PG RGE G GR G
Sbjct: 375 QGRAGAPGSPGLGGQKGDQGMPGK--PGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAP 432
Query: 258 GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGPRGVPGIDGLPG 428
GA G G +G++G G G GE G G G P G G PGP G G G PG
Sbjct: 433 GAQGERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGAPGPVGNAGSPGSPG 490
Score = 67.3 bits (157), Expect = 8e-12
Identities = 48/132 (36%), Positives = 55/132 (41%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXX 215
GR G G PG G +G G PG G G G +G G
Sbjct: 376 GRAGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPG--------------------ARG 415
Query: 216 XRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP 395
GERG G PG GA G GE+G RG G+ G G G G G P + G++G GP
Sbjct: 416 DYGERGEPGAPGRDGAPGAQGERGPRGEQGKQGEKGHAGEGGADGAPG--IPGEQGPMGP 473
Query: 396 RGVPGIDGLPGS 431
G PG G GS
Sbjct: 474 VGAPGPVGNAGS 485
Score = 57.2 bits (132), Expect = 9e-09
Identities = 43/121 (35%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGND---GAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXX 173
A G G G G+ G G PG+ G QGP G G TG +G G++G G G G
Sbjct: 173 ANGTAGPPGVRGQPGAIGSPGDAGRAGPQGPQGAEGRTGRRGSLGERG--GKGPQGSRGP 230
Query: 174 XXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G RG +G PG GA G +GE G+ G G G G G G+ G
Sbjct: 231 V---------------GPRGANGVPGSPGADGDTGEAGEHGADGLKGDRGADGLPGEDGI 275
Query: 354 P 356
P
Sbjct: 276 P 276
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Frame = +3
Query: 261 AIGMSGEKGDRGFP--GRSGLTGEPGYKGDKGEPAAV----VYGQKGEP---GPRGVPGI 413
A G+ G G G P R G+ G PG +GD+G P A + G+ GEP GPRG PG
Sbjct: 99 ARGLIGPPGPPGKPVIRRVGIPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGD 158
Query: 414 DGLPG 428
G PG
Sbjct: 159 VGEPG 163
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGP 86
G+ G G G G G PG DG GP
Sbjct: 253 GEHGADGLKGDRGADGLPGEDGIPGP 278
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 90.6 bits (215), Expect = 8e-19
Identities = 56/147 (38%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G KG G+ G G+PG G +G G G G KG+ G GP+G G PG
Sbjct: 105 GDPGPKGNKGQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPIGPPGPILDYNDT 164
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAI-----GMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
R D + G G I G GE G+RG PG G G G KG G
Sbjct: 165 SGAGPDPILIGSIVRSRDSKGPGAGGIIAEIQGPPGEPGERGEPGEPGAAGAKGAKGQPG 224
Query: 351 EPAAV-VYGQKGEPGPRGVPGIDGLPG 428
P V G +GEPGP G G+ GLPG
Sbjct: 225 PPGLVGEPGPEGEPGPVGPTGVPGLPG 251
Score = 73.7 bits (173), Expect = 1e-13
Identities = 49/149 (32%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A G +G++G G +G G+ G G GP G PG + D GP +
Sbjct: 124 APGDRGERGSAGSDGPKGEAGGPGPLGPIGPPGPILDYNDTSGAGPDPILIGSIVRSRDS 183
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE--P 356
+G G G G G G +G KG +G PG GL GEPG +G+ G P
Sbjct: 184 KGPGAGGIIAEIQGPPGEPGERGEPGEPGAAGAKGAKGQPGPPGLVGEPGPEGEPGPVGP 243
Query: 357 AAV-----VYGQKGEPGPRGVPGIDGLPG 428
V V G +GE G RG G G G
Sbjct: 244 TGVPGLPGVKGDRGEQGARGEKGEQGKTG 272
Score = 67.3 bits (157), Expect = 8e-12
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G+ GE G G G G GA+G G PG+ GE G +G+ GPVG G+PG
Sbjct: 197 GPPGEPGERGEPGEPGAAGAKGAKGQPGPPGLVGEPGPEGEPGPVGPTGVPG-------- 248
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGL 317
RGE+G G G QG G G G+ G PG++GL
Sbjct: 249 ----LPGVKGDRGEQGARGEKGEQGKTGERGPVGEAGRPGQNGL 288
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G+ G+ G +G+ G PG G GP G PG GE+G G GP G
Sbjct: 938 GYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGERGQSGPPGPPG 983
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDK---GDQGPVG-YGLPGE 164
+G+ G +GE G G G PG G +G G G GEKG++ G++GPVG G PG+
Sbjct: 229 VGEPGPEGEPGPVGPTGVPGLPGVKGDRGEQGARGEKGEQGKTGERGPVGEAGRPGQ 285
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLP 425
P +G G G KG++G PG G G PG +G++G +A G KGE G G G G P
Sbjct: 98 PQRRGPPGDPGPKGNKGQPGAQGRPGAPGDRGERG--SAGSDGPKGEAGGPGPLGPIGPP 155
Query: 426 G 428
G
Sbjct: 156 G 156
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/55 (43%), Positives = 26/55 (47%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPG 410
PG G G G+ GD G G G G G +GD G GQ G PGP G PG
Sbjct: 934 PGDPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGE--RGQSGPPGPPGPPG 986
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G+ G G+PG G G+ G G R G G G+PG +G++G+ G G PGP G
Sbjct: 935 GDPGYTGKPGKYGDDGLEGSPGPR---GPIGPQGDPGPEGERGQS-----GPPGPPGPPG 986
Query: 402 VP 407
P
Sbjct: 987 PP 988
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/60 (40%), Positives = 27/60 (45%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G PG G G G+ G +G PG G GE G G G G+ G PGP G G G
Sbjct: 102 GPPGDPGPKGNKGQPGAQGRPGAPGDRGERGSAGSDGPK-----GEAGGPGPLGPIGPPG 156
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 288 DRGFPGRSGLTGEPGYKGD---KGEPA-AVVYGQKGEPGPRGVPGIDGLPG 428
+R PG G TG+PG GD +G P G +G+PGP G G G PG
Sbjct: 930 EREHPGDPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGERGQSGPPG 980
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +3
Query: 300 PGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
P R G G+PG KG+KG+P G +G PG G G G GSD
Sbjct: 98 PQRRGPPGDPGPKGNKGQP-----GAQGRPGAPGDRGERGSAGSD 137
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G G+PG G G G PG G G +GD GP G
Sbjct: 935 GDPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEG 971
Score = 35.1 bits (77), Expect = 0.041
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPG 161
++ G+ G G G+ G+DG +G G G G +GD G +G G G PG
Sbjct: 930 EREHPGDPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGERGQSGPPG 980
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFS-PVIPG 95
PPG P + P P G P P G P P G P+ P P +PG
Sbjct: 198 PPGEPGERGEPGEPGAAGAKGAKGQPGPPGLVGEPGPEGEPGPVGPTGVPGLPG 251
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 90.2 bits (214), Expect = 1e-18
Identities = 55/141 (39%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G KG G G G+ G G GAQGP G G +G KG G+ G G GL G+
Sbjct: 25 GNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSGEKGYR 84
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
RG G G PGG G G G G G PG G G G G KG+
Sbjct: 85 GAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPGPQGFNGARGPNGPKGDSGRP 144
Query: 366 VYGQKGEPGPRGVPGIDGLPG 428
GQ G GP G PG G PG
Sbjct: 145 --GQDGRQGPPGPPGARGEPG 163
Score = 88.2 bits (209), Expect = 4e-18
Identities = 54/144 (37%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFP---GITGEKGDKGDQGPVG-YGLPGEXXXXXX 182
+G GE GR+G G G G +G G P G+ G +G G QGP+G G G
Sbjct: 6 QGDPGEPGRDGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGE 65
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
GE+G G PG QG G G +GD G PG SG G+ G G G P
Sbjct: 66 DGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPGP 125
Query: 363 VVYGQKGEPGPRGVPGIDGLPGSD 434
G G GP G G G PG D
Sbjct: 126 --QGFNGARGPNGPKGDSGRPGQD 147
Score = 85.8 bits (203), Expect = 2e-17
Identities = 57/146 (39%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G +G G+ GR G G G DGA+G G G +GEKG +G P GL G+
Sbjct: 46 GAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSGEKGYRG--APGRQGLQGKRGPEGDPG 103
Query: 189 XXXXXXXXXXRGERGLDGRPGGQ---GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+G G G PG Q GA G +G KGD G PG+ G G PG G +GEP
Sbjct: 104 SPGGSGEAGDKGVDGPPGSPGPQGFNGARGPNGPKGDSGRPGQDGRQGPPGPPGARGEPG 163
Query: 360 --AVVYGQKGEPGP-RGVPGIDGLPG 428
A + Q PGP +G PG PG
Sbjct: 164 QQAPMMIQVSRPGPNKGPPGPGPGPG 189
Score = 81.0 bits (191), Expect = 6e-16
Identities = 52/152 (34%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G+ G G G G GN G G G G+ G +G G QGP+G G G
Sbjct: 7 GDPGEPGRDGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGED 66
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
GE+G G PG QG G G +GD G PG SG G+ G G G P
Sbjct: 67 GAEGAAGLVGDSGEKGYRGAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPGPQ 126
Query: 366 VY----------GQKGEPGPRGVPGIDGLPGS 431
+ G G PG G G G PG+
Sbjct: 127 GFNGARGPNGPKGDSGRPGQDGRQGPPGPPGA 158
Score = 65.3 bits (152), Expect = 3e-11
Identities = 49/143 (34%), Positives = 59/143 (41%), Gaps = 1/143 (0%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXX 179
A G G GE G G G+ G G +GP G PG G G+ GD+G G G PG
Sbjct: 71 AAGLVGDSGEKGYRGAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPGP----- 125
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+G G G G +G G G+ G +G PG G GEPG +
Sbjct: 126 -------------QGFNGARGPNGPKGDSGRPGQDGRQGPPGPPGARGEPGQQAPMMIQV 172
Query: 360 AVVYGQKGEPGPRGVPGIDGLPG 428
+ KG PGP PG PG
Sbjct: 173 SRPGPNKGPPGPGPGPGPGPAPG 195
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 89.8 bits (213), Expect = 1e-18
Identities = 55/143 (38%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXX 179
A+G+ G G G G G G+DG+ G G GITG++G +G G G G PG
Sbjct: 253 AIGKTGNAGLPGSTGAPGAAGSDGSVGKQGRKGITGDRGAQGKTGKQGPTGTPGTVGLRG 312
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+GE G G PG GA G SG++GD G G G+ G G G +GE
Sbjct: 313 VTGPDGSNGQPGRQGEPGKQGLPGESGAQGDSGDEGDGGAKGDKGVFGGVGLDGAEGEQG 372
Query: 360 AVVYGQKGEPGPRGVPGIDGLPG 428
A G+ G+ GP G PG G PG
Sbjct: 373 A--RGKSGDFGPIGPPGPLGPPG 393
Score = 81.8 bits (193), Expect = 4e-16
Identities = 49/141 (34%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G+ G++G+ G G G+ GN G G TG PG G G G QG G + G+
Sbjct: 240 GKAGKEGKAGDRGAIGKTGNAGLPGSTGAPGAAGSDGSVGKQGRKG--ITGDRGAQGKTG 297
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA-AV 365
G RG+ G G G G GE G +G PG SG G+ G +GD G
Sbjct: 298 KQGPTGTPGTVGLRGVTGPDGSNGQPGRQGEPGKQGLPGESGAQGDSGDEGDGGAKGDKG 357
Query: 366 VYGQKGEPGPRGVPGIDGLPG 428
V+G G G G G G G
Sbjct: 358 VFGGVGLDGAEGEQGARGKSG 378
Score = 78.2 bits (184), Expect = 4e-15
Identities = 54/177 (30%), Positives = 71/177 (40%), Gaps = 15/177 (8%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGP---------TGFPGIT-----GEKGDKGDQGP 140
A+G G +GE G GI G G G +GP + + G+ GD G G
Sbjct: 182 AVGDSGPRGERGELGIRGNKGPVGVEGPRFSIRIVLHAQYSSVAVFDFKGDSGDGGSDGK 241
Query: 141 VGY-GLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGL 317
G G G+ G G DG G QG G++G++G +G G+ G
Sbjct: 242 AGKEGKAGDRGAIGKTGNAGLPGSTGAPGAAGSDGSVGKQGRKGITGDRGAQGKTGKQGP 301
Query: 318 TGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGDR 488
TG PG G +G G G+PG +G PG GLPG KGD+
Sbjct: 302 TGTPGTVGLRGVTGPD--GSNGQPGRQGEPGKQGLPGESGAQGDSGDEGDGGAKGDK 356
Score = 72.1 bits (169), Expect = 3e-13
Identities = 48/150 (32%), Positives = 62/150 (41%), Gaps = 10/150 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGD---------QGPVGYGLPG 161
G GQ G GR+G+ G G G GP G G G+ G +G+ +GPVG P
Sbjct: 151 GANGQPGLPGRDGVPGTVGESGPPGPAGPIGAVGDSGPRGERGELGIRGNKGPVGVEGPR 210
Query: 162 EXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG 341
+G+ G G G G G +G++G G G +GL G G G
Sbjct: 211 FSIRIVLHAQYSSVAVFDFKGDSGDGGSDGKAGKEGKAGDRGAIGKTGNAGLPGSTGAPG 270
Query: 342 DKGEPAAV-VYGQKGEPGPRGVPGIDGLPG 428
G +V G+KG G RG G G G
Sbjct: 271 AAGSDGSVGKQGRKGITGDRGAQGKTGKQG 300
Score = 70.9 bits (166), Expect = 7e-13
Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G +G +G+ G++G G PG G +G TG G G+ G +G+ G GLPGE
Sbjct: 288 GDRGAQGKTGKQGPTGTPGTVGLRGVTGPDGSNGQPGRQGEPGK--QGLPGESGAQGDSG 345
Query: 189 XXXXXXXXXXRGERG---LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
+G G LDG G QGA G SG+ G G PG G G+ G +G G
Sbjct: 346 DEGDGGAKGDKGVFGGVGLDGAEGEQGARGKSGDFGPIGPPGPLGPPGDRGMQGPVG 402
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/143 (35%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQ---PGNDGAQGPTGFPGITGEKGDKGDQGPVGY----GLPG 161
A G G G+ GR+GI G G G QGPTG PG G +G G G G G PG
Sbjct: 271 AAGSDGSVGKQGRKGITGDRGAQGKTGKQGPTGTPGTVGLRGVTGPDGSNGQPGRQGEPG 330
Query: 162 EXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG 341
+ G +G G GG G G GE+G RG G G G PG G
Sbjct: 331 KQGLPGESGAQGDSGDEGDGGAKGDKGVFGGVGLDGAEGEQGARGKSGDFGPIGPPGPLG 390
Query: 342 DKGEPAAVVYGQKGEPGPRGVPG 410
G+ G +G G RG G
Sbjct: 391 PPGD-----RGMQGPVGLRGTVG 408
Score = 67.3 bits (157), Expect = 8e-12
Identities = 49/138 (35%), Positives = 56/138 (40%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
G G +G G G G G G G PG GE G +G GP G
Sbjct: 85 GPPGPVGEGGPNGASGPAGVAGERGLPGGLGETGQQGMLGPAG----------------- 127
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQ 377
GE G DG PG G G G G G PGR G+ G G G G PA + G
Sbjct: 128 ---AKGGLGEPGTDGPPGDAGMQGSDGANGQPGLPGRDGVPGTVGESGPPG-PAGPI-GA 182
Query: 378 KGEPGPRGVPGIDGLPGS 431
G+ GPRG G G+ G+
Sbjct: 183 VGDSGPRGERGELGIRGN 200
Score = 66.1 bits (154), Expect = 2e-11
Identities = 56/166 (33%), Positives = 65/166 (39%), Gaps = 24/166 (14%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLP---GEXXX 173
LG+ GQ+G LG G G G G GP G G+ G G G G P G+P GE
Sbjct: 114 LGETGQQGMLGPAGAKGGLGEPGTDGPPGDAGMQGSDGANGQPGLPGRDGVPGTVGESGP 173
Query: 174 XXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGE--------------------KGDR 293
RGERG G G +G +G+ G KGD
Sbjct: 174 PGPAGPIGAVGDSGPRGERGELGIRGNKGPVGVEGPRFSIRIVLHAQYSSVAVFDFKGDS 233
Query: 294 GFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G G G G+ G GD+G A G G PG G PG G GS
Sbjct: 234 GDGGSDGKAGKEGKAGDRG--AIGKTGNAGLPGSTGAPGAAGSDGS 277
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/71 (43%), Positives = 35/71 (49%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G G G G GA G +G G+RG PG G TG+ G G G G GEPG G
Sbjct: 85 GPPGPVGEGGPNGASGPAGVAGERGLPGGLGETGQQGMLGPAG-----AKGGLGEPGTDG 139
Query: 402 VPGIDGLPGSD 434
PG G+ GSD
Sbjct: 140 PPGDAGMQGSD 150
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEK 116
A G+ G G +G G G PG+ G QGP G G G +
Sbjct: 373 ARGKSGDFGPIGPPGPLGPPGDRGMQGPVGLRGTVGAR 410
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 87.4 bits (207), Expect = 7e-18
Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G +G +G G+ G+ G G GA+G TG G TG G +G G G G PG+
Sbjct: 193 GLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAK 252
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
RG RGL G G +GA G G +G G PGR+G+ G PG KG G A
Sbjct: 253 GAMGP------RGYRGLTGSKGARGARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGAT 306
Query: 366 -VYGQKGEPGPRGVPGIDGLPGS 431
G +G GP+G G+ GL GS
Sbjct: 307 GPRGLRGLRGPQGNQGLRGLKGS 329
Score = 86.6 bits (205), Expect = 1e-17
Identities = 54/150 (36%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-------GLPGEX 167
G+ G KG+ G G G G G +GP G G+ G KG +G QG G G PG
Sbjct: 292 GRPGSKGKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRT 351
Query: 168 XXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTG---EPGYK 338
+G RG G G QG G +G++G RG PGR+G TG +PG +
Sbjct: 352 GARGKIGPRGFTGLKGAKGVRGATGLRGPQGPRGFTGKQGLRGVPGRTGKTGANGKPGLR 411
Query: 339 GDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G +G + G+ G GPRG+ G+ G G
Sbjct: 412 GPQGLKG--LKGKTGATGPRGLRGLKGSRG 439
Score = 84.2 bits (199), Expect = 7e-17
Identities = 57/143 (39%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXX 179
A G++G +G GR G G PG G++G TG G TG +G +G +GP G GL G
Sbjct: 272 ARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLRGPQGNQGLRG------ 325
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+G RG+ GRPG GA G +G G G G+ G G G KG KG
Sbjct: 326 ------------LKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRG 373
Query: 360 AVVYGQKGEPGPRGVPGIDGLPG 428
A G +G GPRG G GL G
Sbjct: 374 AT--GLRGPQGPRGFTGKQGLRG 394
Score = 80.6 bits (190), Expect = 8e-16
Identities = 50/143 (34%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G KG +G G++G+ G G G G G PG G+ G +G GP G GL G
Sbjct: 265 GSKGARGARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLRGPQGNQGLR 324
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G+ G GR G G G G+ G RGF G G G G G +G
Sbjct: 325 GLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPQGP- 383
Query: 366 VYGQKGEPGPRGVPGIDGLPGSD 434
G G+ G RGVPG G G++
Sbjct: 384 -RGFTGKQGLRGVPGRTGKTGAN 405
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/141 (34%), Positives = 65/141 (46%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G +G +G G++G+ G PG G G G PG+ G +G KG +G G P
Sbjct: 379 GPQGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGPQGLKGLKGKTGATGP--------RG 430
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
G RG G G QG G G G RG G++G TG+ G KG +G V
Sbjct: 431 LRGLKGSRGWTGPRGKTGATGPQGLRGYRGYTGARGLQGKTGKTGQKGAKGARGTQG--V 488
Query: 369 YGQKGEPGPRGVPGIDGLPGS 431
G +G GP+G+ G G G+
Sbjct: 489 RGPRGYRGPQGLRGPQGAKGT 509
Score = 78.2 bits (184), Expect = 4e-15
Identities = 51/130 (39%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXXXXR 221
G G G GA+GP G G+ G KG G +G G G G +
Sbjct: 115 GKQGPRGWTGARGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLK 174
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G RGL G G GA G G +G RGF G+ GLTG G KG +G A G G G RG
Sbjct: 175 GSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARG--ATGPRGYTGRTGLRG 232
Query: 402 VPGIDGLPGS 431
VPG G G+
Sbjct: 233 VPGKSGRNGT 242
Score = 75.4 bits (177), Expect = 3e-14
Identities = 50/145 (34%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G +G G G G+ G G+ G +G G G+TG +G G +GP G G G
Sbjct: 148 GSRGFMGPRGLRGLKGTTGSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLT 207
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEK---GDRGFPGRSGLTGEPGYKGDKGEP 356
G RG GR G +G G SG G G PG G G GY+G G
Sbjct: 208 GPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLTGSK 267
Query: 357 AA-VVYGQKGEPGPRGVPGIDGLPG 428
A G++G G G PG +G+PG
Sbjct: 268 GARGARGKQGLRGATGRPGRNGVPG 292
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 87.0 bits (206), Expect = 1e-17
Identities = 58/152 (38%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP-GEXXXXXX 182
LG G +GE G +G G PG G QGP G G G G KG +G G P G
Sbjct: 687 LGITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGEAGPDGPAGPAGL 746
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGR---------SGLTGEPGY 335
G G G PG QG G G G +G G+ SG GEPG
Sbjct: 747 DGKNGINGEDGAPGSDGAQGNPGPQGPTGTRGIPGPQGKNGKMGPTGPRGPSGKNGEPGP 806
Query: 336 KGDKGEPAA-VVYGQKGEPGPRGVPGIDGLPG 428
+G +GE A V G KGE GP G G G PG
Sbjct: 807 QGPEGEAGANGVSGPKGEMGPEGEAGQPGPPG 838
Score = 86.2 bits (204), Expect = 2e-17
Identities = 57/154 (37%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGF------------PGITGEKGDKGDQGPVGY- 149
GQ+G G G GIAG+ G DG GP G PG G +G+ G QGP G
Sbjct: 718 GQRGPPGPKGSRGIAGEAGPDGPAGPAGLDGKNGINGEDGAPGSDGAQGNPGPQGPTGTR 777
Query: 150 GLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP 329
G+PG GE G G G GA G+SG KG+ G G +G G P
Sbjct: 778 GIPGPQGKNGKMGPTGPRGPSGKNGEPGPQGPEGEAGANGVSGPKGEMGPEGEAGQPGPP 837
Query: 330 GYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G G G GQ G+PG G G G PG+
Sbjct: 838 GPPGPNGP-----VGQTGQPGTPGPDGAAGEPGA 866
Score = 79.0 bits (186), Expect = 3e-15
Identities = 54/140 (38%), Positives = 59/140 (42%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G+ G GE G G G GN G QGPTG GI G +G G GP G P
Sbjct: 748 GKNGINGEDGAPGSDGAQGNPGPQGPTGTRGIPGPQGKNGKMGPTGPRGP---------- 797
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
GE G G G GA G+SG KG+ G G +G G PG G G
Sbjct: 798 -------SGKNGEPGPQGPEGEAGANGVSGPKGEMGPEGEAGQPGPPGPPGPNGPVGQT- 849
Query: 369 YGQKGEPGPRGVPGIDGLPG 428
GQ G PGP G G G G
Sbjct: 850 -GQPGTPGPDGAAGEPGARG 868
Score = 78.2 bits (184), Expect = 4e-15
Identities = 49/131 (37%), Positives = 58/131 (44%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
G G+ G G +G PG G QG G PG G KGD+G G + G
Sbjct: 526 GANGQRGVTGPSGSPGPGGLQGAAGMPGPAGPKGDRGSPG-----VSGASGAKGAKGHEG 580
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQ 377
RGE G G PG +G G +G +G RG G SGL G PG +G P G
Sbjct: 581 GRGKRGQRGETGEQGLPGARGKQGANGPRGPRGIKGASGLQGGPGLQG----PG----GF 632
Query: 378 KGEPGPRGVPG 410
KG GP G+ G
Sbjct: 633 KGPIGPTGLQG 643
Score = 72.5 bits (170), Expect = 2e-13
Identities = 42/117 (35%), Positives = 51/117 (43%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A G G +G G GI G G +G GPTG G +G+ G+ G QGP G
Sbjct: 764 AQGNPGPQGPTGTRGIPGPQGKNGKMGPTGPRGPSGKNGEPGPQGPEG--------EAGA 815
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
GE G G PG G G G+ G G PG G GEPG +G +G+
Sbjct: 816 NGVSGPKGEMGPEGEAGQPGPPGPPGPNGPVGQTGQPGTPGPDGAAGEPGARGPRGK 872
Score = 70.5 bits (165), Expect = 9e-13
Identities = 46/130 (35%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPG---ITGEKGDKGDQG-PVGYGLPGEXXXX 176
G GQ G+ G++GI G+ G G QG G G + + +G G P G+PG
Sbjct: 314 GIPGQGGQKGQQGITGEKGARGTQGVAGAAGQIVVCKSRIPQGSSGVPGAQGMPGPRGST 373
Query: 177 XXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G+RG G PG +GA+G G +G RG GR G G+ G KG G P
Sbjct: 374 GEAGRQGPPGA---NGDRGQPGAPGAEGAMGEKGNQGSRGPTGRVGPDGKTGPKGQNGIP 430
Query: 357 AAVVYGQKGE 386
G+KGE
Sbjct: 431 GR--DGRKGE 438
Score = 62.9 bits (146), Expect = 2e-10
Identities = 48/153 (31%), Positives = 63/153 (41%), Gaps = 11/153 (7%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP-GEXXXXXXX 185
GQ+G+ GE G G G+ G +G +GP G G +G +G G QGP G+ P G
Sbjct: 586 GQRGETGEQGLPGARGKQGANGPRGPRGIKGASGLQGGPGLQGPGGFKGPIGPTGLQGAR 645
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDR------GFPGRSGLTGEPGYKGDK 347
+P +G + E R G G G TG G +G
Sbjct: 646 VSMHVRKPVGKASYNCHRQKPRNCIVVGNNTEYFRRRRCYFLGITGPQGETGSDGAQGAP 705
Query: 348 GEPAAV----VYGQKGEPGPRGVPGIDGLPGSD 434
GE + GQ+G PGP+G GI G G D
Sbjct: 706 GEGGLQGPIGLQGQRGPPGPKGSRGIAGEAGPD 738
Score = 60.9 bits (141), Expect = 7e-10
Identities = 41/123 (33%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = +3
Query: 87 TGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGA 263
TG PG G+KG +G G G G G G G G PG +G+
Sbjct: 313 TGIPGQGGQKGQQGITGEKGARGTQGVAGAAGQIVVCKSRIPQGSSGVPGAQGMPGPRGS 372
Query: 264 IGMSGEK------GDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLP 425
G +G + GDRG PG G G G KG++G G+ G G G G +G+P
Sbjct: 373 TGEAGRQGPPGANGDRGQPGAPGAEGAMGEKGNQGSRGPT--GRVGPDGKTGPKGQNGIP 430
Query: 426 GSD 434
G D
Sbjct: 431 GRD 433
Score = 60.1 bits (139), Expect = 1e-09
Identities = 52/159 (32%), Positives = 61/159 (38%), Gaps = 17/159 (10%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQ------GPVG---YGLPG 161
G G +G G +G +G G G QGP GF G G G +G + PVG Y
Sbjct: 604 GANGPRGPRGIKGASGLQGGPGLQGPGGFKGPIGPTGLQGARVSMHVRKPVGKASYNCHR 663
Query: 162 EXXXXXXXXXXXXXXXXXXR----GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP 329
+ R G G G G GA G GE G +G G G G P
Sbjct: 664 QKPRNCIVVGNNTEYFRRRRCYFLGITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPP 723
Query: 330 GYKGDKGEPAAV----VYGQKGEPGPRGVPGIDGLPGSD 434
G KG +G G G G G+ G DG PGSD
Sbjct: 724 GPKGSRGIAGEAGPDGPAGPAGLDGKNGINGEDGAPGSD 762
Score = 59.3 bits (137), Expect = 2e-09
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Frame = +3
Query: 72 GAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRP 248
G + P G G G G G GP G G G G +G G
Sbjct: 520 GVRAPDGANGQRGVTGPSGSPGPGGLQGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHE 579
Query: 249 GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
GG+G G GE G++G PG G G G +G +G A G +G PG +G G G
Sbjct: 580 GGRGKRGQRGETGEQGLPGARGKQGANGPRGPRGIKGA--SGLQGGPGLQGPGGFKG 634
Score = 58.8 bits (136), Expect = 3e-09
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Frame = +3
Query: 222 GERGLDGR-----PGG-QGAIGM---SGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYG 374
G+RG+ G PGG QGA GM +G KGDRG PG SG +G G KG +G G
Sbjct: 529 GQRGVTGPSGSPGPGGLQGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGRGK--RG 586
Query: 375 QKGEPGPRGVPGIDGLPGSD 434
Q+GE G +G+PG G G++
Sbjct: 587 QRGETGEQGLPGARGKQGAN 606
Score = 50.8 bits (116), Expect = 8e-07
Identities = 30/73 (41%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP----AAVVYGQKGEP 389
G R DG G +G G SG G G G +G+ G G KGD+G P A+ G KG
Sbjct: 520 GVRAPDGANGQRGVTGPSGSPGPGGLQGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHE 579
Query: 390 GPRGVPGIDGLPG 428
G RG G G G
Sbjct: 580 GGRGKRGQRGETG 592
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLPGE 164
A G +GQ G G EG G+ GN G++GPTG G G+ G KG G P G GE
Sbjct: 384 ANGDRGQPGAPGAEGAMGEKGNQGSRGPTGRVGPDGKTGPKGQNGIPGRDGRKGE 438
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
A G G +G G G G PG +G +G G PG G G+KG+QG G
Sbjct: 363 AQGMPGPRGSTGEAGRQGPPGANGDRGQPGAPGAEGAMGEKGNQGSRG 410
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXX 194
G+ G GR G GQ G G G G G G GD G +GPVG G PG
Sbjct: 114 GRLGPPGRRGPPGQNGAPGLDGENGEQGQKGSSGDPGSEGPVGPPGKPGMDGAKVSYLSE 173
Query: 195 XXXXXXXXRGERGLDGRPGGQGAIGMSGEKG 287
+R D G +G + G+ G
Sbjct: 174 CYASSREIE-QRISDSDSGSEGPVRQLGKPG 203
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEK 116
A G G+ GE G++G +G PG++G GP G PG+ G K
Sbjct: 130 APGLDGENGEQGQKGSSGDPGSEGPVGPPGKPGMDGAK 167
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = +3
Query: 264 IGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
IG G G RG PG++G G G G++G+ G G+PG G G G PG D
Sbjct: 113 IGRLGPPGRRGPPGQNGAPGLDGENGEQGQK-----GSSGDPGSEGPVGPPGKPGMD 164
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQ 134
A G G+KG G G G+ G DG GP G GI G G KG++
Sbjct: 396 AEGAMGEKGNQGSRGPTGRVGPDGKTGPKGQNGIPGRDGRKGER 439
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
RG G +G PG G G G+KG G PG G G PG G G
Sbjct: 122 RGPPGQNGAPGLDGENGEQGQKGSSGDPGSEGPVGPPGKPGMDG 165
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G G G PG GA G+ GE G++G + G +G+PG +G G P
Sbjct: 117 GPPGRRGPPGQNGAPGLDGENGEQG---QKGSSGDPGSEGPVGPP 158
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGE 386
G+ G G G G G G GD G G G G+PG G K + Y E
Sbjct: 126 GQNGAPGLDGENGEQGQKGSSGDPGSEGPVGPPGKPGMDGAKVSYLSECYASSRE 180
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTG 92
+GQ GQ G G +G AG+PG G +G G
Sbjct: 846 VGQTGQPGTPGPDGAAGEPGARGPRGKLG 874
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 87.0 bits (206), Expect = 1e-17
Identities = 50/143 (34%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G +G GE G G+ G+ G DG +G G G +G GDKG GP G+ PG
Sbjct: 14 GPRGPPGEQGFSGVKGKEGRDGVKGERGSKGKSGLPGDKGPVGPPGH--PGHKGPTGESG 71
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGF---PGRSGLTGEPGYKGDKGEPA 359
+G GL G G G G G G GF PG+ G+ G G +G G+
Sbjct: 72 PTGALGAKGQKGRMGLKGDAGYDGVDGFKGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAG 131
Query: 360 AVVYGQKGEPGPRGVPGIDGLPG 428
++ G G G G+PG DG G
Sbjct: 132 SI--GDPGPNGASGMPGFDGTKG 152
Score = 82.2 bits (194), Expect = 3e-16
Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G+ G KGE G +G +G PG+ G GP G PG KG G+ GP G G G+
Sbjct: 32 GRDGVKGERGSKGKSGLPGDKGPVGPPGHPG---HKGPTGESGPTGALGAKGQKGRMGLK 88
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
+G G G G G G+ G +G +G G++G G+PG G G P
Sbjct: 89 GDAGYDGVDGFKGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGPNGASGMPG-- 146
Query: 366 VYGQKGEPGPRGVPGIDG 419
G KG+PG G G+ G
Sbjct: 147 FDGTKGDPGDEGNEGLPG 164
Score = 79.4 bits (187), Expect = 2e-15
Identities = 49/152 (32%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+G G +G G G G PG G G G G G KG++G +G GLPG+
Sbjct: 1 MGLMGSRGTPGDRGPRGPPGEQGFSGVKGKEGRDGVKGERGSKGK--SGLPGDKGPVGPP 58
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G G G G +G +G+ G+ G G G GL G PG++GD G+P
Sbjct: 59 GHPGHKGPTGESGPTGALGAKGQKGRMGLKGDAGYDGVDGFKGLPGPPGFQGDPGKPGIR 118
Query: 366 VY----------GQKGEPGPRGVPGIDGLPGS 431
+ G G+PGP G G+ G G+
Sbjct: 119 GHEGLQGVSGKAGSIGDPGPNGASGMPGFDGT 150
Score = 79.4 bits (187), Expect = 2e-15
Identities = 47/126 (37%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G G KG +G G G G G GPTG G G+KG G +G GY G+ G
Sbjct: 47 GLPGDKGPVGPPGHPGHKGPTGESGPTGALGAKGQKGRMGLKGDAGYDGVDGFKGLPGPP 106
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
RG GL G G G+IG G G G PG G G+PG +G++G P +
Sbjct: 107 GFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGPNGASGMPGFDGTKGDPGDEGNEGLPGDI 166
Query: 366 VYGQKG 383
V KG
Sbjct: 167 VPRYKG 172
Score = 61.3 bits (142), Expect = 5e-10
Identities = 45/116 (38%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXX 179
ALG KGQKG +G +G AG G DG +G G PG G+ G G +G G G+ G+
Sbjct: 75 ALGAKGQKGRMGLKGDAGYDGVDGFKGLPGPPGFQGDPGKPGIRGHEGLQGVSGKA---- 130
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGE--PGYKG 341
G G G G G G G KGD G G GL G+ P YKG
Sbjct: 131 --------------GSIGDPGPNGASGMPGFDGTKGDPGDEGNEGLPGDIVPRYKG 172
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +3
Query: 330 GYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGDR 488
G G +G P G +G PG +G G+ G G D + GD+
Sbjct: 2 GLMGSRGTPGD--RGPRGPPGEQGFSGVKGKEGRDGVKGERGSKGKSGLPGDK 52
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 82.6 bits (195), Expect = 2e-16
Identities = 52/141 (36%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G KG G G EG G G G +GP G GITG +G KGD G G G G+
Sbjct: 342 GPKGDTGITGPEGPKGDTGITGPEGPKGDTGITGPQGPKGDTGITGPQGPKGDTGITGPQ 401
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G +G G G +G G +G G +G G +G+TG G KGD G
Sbjct: 402 GPKGDTGITGPEGPKGDTGITGPEGPKGDTGITGPQGPKGDTGITGPQGPKGDTGITGP- 460
Query: 366 VYGQKGEPGPRGVPGIDGLPG 428
G KG+ G +G G+ GL G
Sbjct: 461 -QGPKGDTGNKGDQGVQGLRG 480
Score = 79.8 bits (188), Expect = 1e-15
Identities = 53/141 (37%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G KG G G EG G G G QGP G GITG +G KGD G G G G+
Sbjct: 354 GPKGDTGITGPEGPKGDTGITGPQGPKGDTGITGPQGPKGDTGITGPQGPKGDTGITGPE 413
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G +G G G QG G +G G +G G +G+TG G KGD G
Sbjct: 414 GPKGDTGITGPEGPKGDTGITGPQGPKGDTGITGPQGPKGDTGITGPQGPKGDTGNK--- 470
Query: 366 VYGQKGEPGPRGVPGIDGLPG 428
G +G G RG G G G
Sbjct: 471 --GDQGVQGLRGYNGTQGAKG 489
Score = 79.4 bits (187), Expect = 2e-15
Identities = 51/139 (36%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXX 194
G KG+ G++G G G G QGP G GITG +G KGD G G G G+
Sbjct: 321 GLKGDTGQQGPKGDTGITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGITGPQGPK 380
Query: 195 XXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VY 371
+G +G G G QG G +G G G G +G+TG G KGD G
Sbjct: 381 GDTGITGPQGPKGDTGITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGITGPQGPK 440
Query: 372 GQKGEPGPRGVPGIDGLPG 428
G G GP+G G G+ G
Sbjct: 441 GDTGITGPQGPKGDTGITG 459
Score = 74.5 bits (175), Expect = 5e-14
Identities = 44/115 (38%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G KG G G +G G G G QGP G GITG +G KGD G G G G+
Sbjct: 378 GPKGDTGITGPQGPKGDTGITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGITGPQ 437
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
+G +G G G QG G +G KGD+G G G G G KG+ G
Sbjct: 438 GPKGDTGITGPQGPKGDTGITGPQGPKGDTGNKGDQGVQGLRGYNGTQGAKGEAG 492
Score = 71.3 bits (167), Expect = 5e-13
Identities = 49/148 (33%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXRG 224
++G G+ G QGP G GITG +G KGD G G G G+ +G
Sbjct: 319 LSGLKGDTGQQGPKGDTGITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGITGPQG 378
Query: 225 ERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGPRG 401
+G G G QG G +G G +G G +G+TG G KGD G G G GP+G
Sbjct: 379 PKGDTGITGPQGPKGDTGITGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGITGPQG 438
Query: 402 VPGIDGLPGSDXXXXXXXXXXXXXMKGD 485
G G+ G KGD
Sbjct: 439 PKGDTGITGPQGPKGDTGITGPQGPKGD 466
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 82.2 bits (194), Expect = 3e-16
Identities = 55/142 (38%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGI-TGEKGDKGDQGPVGY-GLPGEXXXXXX 182
G G G LG G AG PGN G G G G G +G G GP G G PG
Sbjct: 477 GPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGP 536
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G GL G PG G G++G G G G G G PGY+G+ G PA
Sbjct: 537 PGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAG 596
Query: 363 VVYGQKGEPGPRGVPGIDGLPG 428
G G+PGP PG++G PG
Sbjct: 597 -PQGPNGQPGP---PGVNGPPG 614
Score = 81.8 bits (193), Expect = 4e-16
Identities = 55/142 (38%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGI-TGEKGDKGDQGPVGY-GLPGEXXXXXX 182
G G G LG G G PGN G G G G G +G G GP G G PG
Sbjct: 392 GPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGP 451
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G GL G PG G G++G G G G G G PGY+G+ G PA
Sbjct: 452 PGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAG 511
Query: 363 VVYGQKGEPGPRGVPGIDGLPG 428
G G+PGP PGI+G PG
Sbjct: 512 -PQGPNGQPGP---PGINGPPG 529
Score = 81.0 bits (191), Expect = 6e-16
Identities = 55/141 (39%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G +G G G G+ G PG G QGP G P G G G GP G G PGE
Sbjct: 55 GPQGPNGPKGPPGLPGPPGPPGFQGPPGNP--AGAIGPPGLPGPNGVNGPPGELGDMGPP 112
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G GL G PG G G +GE G G G G G PG +G+ G PA
Sbjct: 113 GPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQGNHGNPAG- 171
Query: 366 VYGQKGEPGPRGVPGIDGLPG 428
+ G G PGP G G G PG
Sbjct: 172 IQGPNGLPGPNGPLGPPGPPG 192
Score = 79.8 bits (188), Expect = 1e-15
Identities = 55/143 (38%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
LG G G++G G+ G PG GP G PG G KG G GP+G PG+
Sbjct: 270 LGPPGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGP--PGDV------ 321
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGM-SGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G G G PG QG G +G +G G PG G+ G PG GD G P
Sbjct: 322 ------------GPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPP-- 367
Query: 363 VVYGQKGEPGPRGVPGIDGLPGS 431
G G PGP+ PG GLPG+
Sbjct: 368 ---GLPGPPGPQMPPGPPGLPGA 387
Score = 79.0 bits (186), Expect = 3e-15
Identities = 54/143 (37%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
LG G G++G G+ G G GP G PG G KG G GP+ G PG+
Sbjct: 185 LGPPGPPGDMGPPGLPGPQGPQMPPGPPGLPGAPGPKGPPGTNGPL--GPPGDV------ 236
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIG-MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G G G PG QG G +G +G G PG +G+ G PG GD G P
Sbjct: 237 ------------GPPGNPGGPGYQGNHGNPAGPQGPNGLPGPNGILGPPGPPGDMGPP-- 282
Query: 363 VVYGQKGEPGPRGVPGIDGLPGS 431
G G PGP+ PG GLPG+
Sbjct: 283 ---GLPGPPGPQMPPGPPGLPGA 302
Score = 77.4 bits (182), Expect = 8e-15
Identities = 54/142 (38%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G G++G G+ G PG GP G PG G KG G GP+G PG+
Sbjct: 356 GPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGP--PGDV------- 406
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGM-SGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G G G PG QG G +G +G G PG G+ G PG GD G P
Sbjct: 407 -----------GPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPP--- 452
Query: 366 VYGQKGEPGPRGVPGIDGLPGS 431
G G PGP+ PG GLPG+
Sbjct: 453 --GLPGPPGPQMPPGPPGLPGA 472
Score = 76.2 bits (179), Expect = 2e-14
Identities = 52/144 (36%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPG-EXXXXX 179
+G G G G + G PG G GP G PG GE G GD GP G G PG +
Sbjct: 109 MGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQGNHGN 168
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
G G G PG G G+ G +G + PG GL G PG KG G
Sbjct: 169 PAGIQGPNGLPGPNGPLGPPGPPGDMGPPGLPGPQGPQMPPGPPGLPGAPGPKGPPGTNG 228
Query: 360 AVVYGQKGEPGPRGVPGIDGLPGS 431
+ G G+ GP G PG G G+
Sbjct: 229 PL--GPPGDVGPPGNPGGPGYQGN 250
Score = 76.2 bits (179), Expect = 2e-14
Identities = 54/142 (38%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G G++G G+ G PG GP G PG G G G GP+G PGE
Sbjct: 441 GPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGP--PGEA------- 491
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGM-SGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G G G PG QG G +G +G G PG G+ G PG GD G P
Sbjct: 492 -----------GPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPP--- 537
Query: 366 VYGQKGEPGPRGVPGIDGLPGS 431
G G PGP+ PG GLPG+
Sbjct: 538 --GLPGPPGPQMPPGPPGLPGA 557
Score = 76.2 bits (179), Expect = 2e-14
Identities = 55/143 (38%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G GQ GE+G G+ G PG P G PG G KG G GP+ G PGE
Sbjct: 781 GPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPL--GPPGECGPAGNAG 838
Query: 189 XXXXXXXXXXRGERGLDGRP-GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G +G G P G QG G G G G PG+ G G PG G G PA+
Sbjct: 839 GV---------GCQGNHGNPAGSQGPNGQPGPPGINGPPGQVGEMGPPGLPGPPG-PASP 888
Query: 366 VY--GQKGEPGPRGVPGIDGLPG 428
G G PGP+G PG +G G
Sbjct: 889 PSPPGPPGPPGPKGPPGPNGCLG 911
Score = 74.9 bits (176), Expect = 4e-14
Identities = 55/141 (39%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G GE+G G AG PG G P PG G G KG GP G G PGE
Sbjct: 608 GVNGPPGEIGEIGPAGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGESGPAGNA 667
Query: 186 XXXXXXXXXXXRGERGLDGRPGG-QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G +G G P G QG G G G G PG+ G G PG G G PA+
Sbjct: 668 GGV---------GYQGNHGNPAGVQGPNGQPGPPGINGPPGQIGEMGPPGLPGPPG-PAS 717
Query: 363 VVY--GQKGEPGPRGVPGIDG 419
G G PGP G PG +G
Sbjct: 718 PPSPPGPPGPPGPNGPPGPNG 738
Score = 72.9 bits (171), Expect = 2e-13
Identities = 55/146 (37%), Positives = 61/146 (41%), Gaps = 5/146 (3%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXX-XXXX 182
G G GELG G G PG G Q P G PG+ G G G G G G PG+
Sbjct: 98 GVNGPPGELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNP 157
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G +G +G PG G +G G GD G PG G G G G P A
Sbjct: 158 GGPGLQGNHGNPAGIQGPNGLPGPNGPLGPPGPPGDMGPPGLPGPQGPQMPPGPPGLPGA 217
Query: 363 VVYGQKGEP---GPRGVPGIDGLPGS 431
G KG P GP G PG G PG+
Sbjct: 218 P--GPKGPPGTNGPLGPPGDVGPPGN 241
Score = 72.9 bits (171), Expect = 2e-13
Identities = 53/140 (37%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G GQ GE+G G+ G PG P G PG G G G GP+ G PGE
Sbjct: 696 GPPGQIGEMGPPGLPGPPGPASPPSPPGPPGPPGPNGPPGPNGPL--GPPGECGPAGNAG 753
Query: 189 XXXXXXXXXXRGERGLDGRP-GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G +G G P G QG G G G G PG+ G G PG G G PA+
Sbjct: 754 GV---------GCQGHHGNPAGSQGPNGQPGPPGINGPPGQVGEMGPPGLPGPPG-PASP 803
Query: 366 VY--GQKGEPGPRGVPGIDG 419
G G PGP+G PG +G
Sbjct: 804 PSPPGPPGPPGPKGPPGPNG 823
Score = 70.5 bits (165), Expect = 9e-13
Identities = 51/142 (35%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXX 182
+G G G G + G PG GA GP G PGI G G G+ GP G G PG
Sbjct: 449 VGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPG--YQGNH 506
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G G++G PG G +G G G G G G PG G G P
Sbjct: 507 GNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPG- 565
Query: 363 VVYGQKGEPGPRGVPGIDGLPG 428
+ G G PG G PG G PG
Sbjct: 566 -INGPLGPPGEAGPPGNPGGPG 586
Score = 69.3 bits (162), Expect = 2e-12
Identities = 57/164 (34%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGND-GAQGPTGFPG---ITGEKGDKGDQGPVGY--------- 149
G G G G G G PGN GA GP G PG + G G+ GD GP G
Sbjct: 64 GPPGLPGPPGPPGFQGPPGNPAGAIGPPGLPGPNGVNGPPGELGDMGPPGPPGPPGPQMP 123
Query: 150 -GLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGE----KGDRGFPGRSG 314
G PG G+ G G PGG G G G +G G PG +G
Sbjct: 124 PGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQGNHGNPAGIQGPNGLPGPNG 183
Query: 315 LTGEPGYKGDKGEPAAV-VYGQKGEPGPRGVPGID---GLPGSD 434
G PG GD G P G + PGP G+PG G PG++
Sbjct: 184 PLGPPGPPGDMGPPGLPGPQGPQMPPGPPGLPGAPGPKGPPGTN 227
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/142 (35%), Positives = 57/142 (40%), Gaps = 1/142 (0%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXX 182
+G G G G + G PG GA GP G PG G G GD GP G G PG
Sbjct: 364 VGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPG--YQGNH 421
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G G++G PG G +G G G G G G PG G G P
Sbjct: 422 GNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPG- 480
Query: 363 VVYGQKGEPGPRGVPGIDGLPG 428
+ G G PG G PG G PG
Sbjct: 481 -INGPLGPPGEAGPPGNPGGPG 501
Score = 68.1 bits (159), Expect = 5e-12
Identities = 50/142 (35%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXX 179
A+G G G G G G+ G+ G GP G PG G G GP G G PG
Sbjct: 87 AIGPPGLPGPNGVNGPPGELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGELG 146
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGG-QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG-E 353
G +G G P G QG G+ G G G PG G G PG G +G +
Sbjct: 147 PPGDVGPPGNPGGPGLQGNHGNPAGIQGPNGLPGPNGPLGPPGPPGDMGPPGLPGPQGPQ 206
Query: 354 PAAVVYGQKGEPGPRGVPGIDG 419
G G PGP+G PG +G
Sbjct: 207 MPPGPPGLPGAPGPKGPPGTNG 228
Score = 62.5 bits (145), Expect = 2e-10
Identities = 47/128 (36%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +3
Query: 60 PGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGL 236
PG G GP GFPG G G KG G P G PG G G+
Sbjct: 42 PGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPG--FQGPPGNPAGAIGPPGLPGPNGV 99
Query: 237 DGRPGGQGAIGMSGEKGDRG---FPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVP 407
+G PG G +G G G G PG GL G PG G G + G G+ GP G P
Sbjct: 100 NGPPGELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGEL--GPPGDVGPPGNP 157
Query: 408 GIDGLPGS 431
G GL G+
Sbjct: 158 GGPGLQGN 165
Score = 52.4 bits (120), Expect = 3e-07
Identities = 45/124 (36%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +3
Query: 60 PGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLD 239
P + P G PG G G G QGP G P G G
Sbjct: 33 PPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGP--------------------PGLPGPP 72
Query: 240 GRPGGQGAIG-MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGID 416
G PG QG G +G G G PG +G+ G PG GD G P G G PGP+ PG
Sbjct: 73 GPPGFQGPPGNPAGAIGPPGLPGPNGVNGPPGELGDMGPP-----GPPGPPGPQMPPGPP 127
Query: 417 GLPG 428
GLPG
Sbjct: 128 GLPG 131
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGN---------DGAQGPTGFPGITGEKGDKGDQGPVG 146
G GQ GE+G G+ G PG G GP G PG G G GD GP G
Sbjct: 866 GPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGCLGPPGDAGPAG 920
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 259 PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSP-GNP*PTGPWSPLSPFSPVIP 98
P PPG+ P P +PG P GP SP SP G P P GP P P P+ P
Sbjct: 774 PGPPGINGPPGQVGEMGPPGLPGPP-GPASPPSPPGPPGPPGPKGPPGPNGPLGP 827
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPG 95
PPGLP P + P P +PG P GP P PG P GP + P P PG
Sbjct: 366 PPGLPGPPGPQMPPGPPGLPGAP-GPKGP--PGTNGPLGPPGDVGP--PGNPG 413
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 259 PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSP-GNP*PTGPWSPLSPFSPVIP 98
P PPG+ P P +PG P GP SP SP G P P GP P P P+ P
Sbjct: 689 PGPPGINGPPGQIGEMGPPGLPGPP-GPASPPSPPGPPGPPGPNGPPGPNGPLGP 742
Score = 35.5 bits (78), Expect = 0.031
Identities = 37/114 (32%), Positives = 44/114 (38%), Gaps = 4/114 (3%)
Frame = -3
Query: 427 PGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPR-SPFSPLIPIA-PC 254
PG P +PG P GP P P +P P P P
Sbjct: 549 PGPPGLPGAP-GPNGP--PGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPG 605
Query: 253 PPGLPSKPRSPLSPFWPM-IPGIPCGPWSPFS-PGNP*PTGPWSPLSPFSPVIP 98
PPG+ + P + P +PG P GP SP S PG P P GP P P P+ P
Sbjct: 606 PPGV-NGPPGEIGEIGPAGLPG-PPGPASPPSPPGPPGPPGPKGPPGPNGPLGP 657
Score = 34.7 bits (76), Expect = 0.054
Identities = 23/54 (42%), Positives = 25/54 (46%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 92
PPGLP P + P P +PG P GP P PG GP P P PGN
Sbjct: 281 PPGLPGPPGPQMPPGPPGLPGAP-GPKGP--PGT---NGPLGPPGDVGP--PGN 326
Score = 34.7 bits (76), Expect = 0.054
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPG 95
PPGLP P + P P +PG P GP P PG P GP P P PG
Sbjct: 451 PPGLPGPPGPQMPPGPPGLPGAP-GPNGP--PGINGPLGPPGEAGP--PGNPG 498
Score = 34.7 bits (76), Expect = 0.054
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPG 95
PPGLP P + P P +PG P GP P PG P GP P P PG
Sbjct: 536 PPGLPGPPGPQMPPGPPGLPGAP-GPNGP--PGINGPLGPPGEAGP--PGNPG 583
Score = 34.7 bits (76), Expect = 0.054
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 259 PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSP-GNP*PTGPWSPLSP 116
P PPG+ P P +PG P GP SP SP G P P GP P P
Sbjct: 859 PGPPGINGPPGQVGEMGPPGLPGPP-GPASPPSPPGPPGPPGPKGPPGP 906
Score = 34.3 bits (75), Expect = 0.072
Identities = 23/49 (46%), Positives = 23/49 (46%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
PPGLP P P SP P PG P GP P P P P GP P P
Sbjct: 706 PPGLPGPP-GPASP--PSPPGPP-GPPGPNGP--PGPNGPLGPPGECGP 748
Score = 34.3 bits (75), Expect = 0.072
Identities = 23/49 (46%), Positives = 23/49 (46%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
PPGLP P P SP P PG P GP P P P P GP P P
Sbjct: 791 PPGLPGPP-GPASP--PSPPGPP-GPPGPKGP--PGPNGPLGPPGECGP 833
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSP-FSPGNP*PTGPWSPLSPFSPV-IPG 95
PPG P +P P + G P GP P PG P GP PL P +PG
Sbjct: 487 PPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPG 541
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -3
Query: 286 PFSPLIPIAPC----PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLS 119
P PL P P PPGLP P+ P P PG P P +P G P GP P
Sbjct: 181 PNGPLGPPGPPGDMGPPGLPG-PQGPQMP-----PGPPGLPGAPGPKGPPGTNGPLGPPG 234
Query: 118 PFSPVIPGN 92
P PGN
Sbjct: 235 DVGP--PGN 241
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSP-FSPGNP*PTGPWSPLSPFSPV-IPG 95
PPG P +P P + G P GP P PG P GP PL P +PG
Sbjct: 317 PPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPG 371
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSP-FSPGNP*PTGPWSPLSPFSPV-IPG 95
PPG P +P P + G P GP P PG P GP PL P +PG
Sbjct: 402 PPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPG 456
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSP-FSPGNP*PTGPWSPLSPFSPV-IPG 95
PPG P +P P + G P GP P PG P GP + P +PG
Sbjct: 572 PPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGVNGPPGEIGEIGPAGLPG 626
Score = 31.1 bits (67), Expect = 0.67
Identities = 22/49 (44%), Positives = 22/49 (44%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
P GLP P P SP P PG P GP P P P P GP P P
Sbjct: 621 PAGLPGPP-GPASP--PSPPG-PPGPPGPKGP--PGPNGPLGPPGESGP 663
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGP----WSPLSPFSPVIPGN 92
PPG P P + P P +PG P GP P PG GP P +P P + GN
Sbjct: 111 PPGPPGPPGPQMPPGPPGLPG-PPGPAGP--PGTNGELGPPGDVGPPGNPGGPGLQGN 165
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/54 (40%), Positives = 24/54 (44%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 92
PPG P P P P P +P GP P PG P P GP P P PG+
Sbjct: 272 PPGPPGDMGPPGLP-GPPGPQMPPGP--PGLPGAPGPKGPPGTNGPLGP--PGD 320
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/49 (44%), Positives = 22/49 (44%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
PPGLP P P SP P PG P GP P P P P G P P
Sbjct: 876 PPGLPGPP-GPASP--PSPPG-PPGPPGPKGP--PGPNGCLGPPGDAGP 918
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G G G PG G GP G G G+ G G+ G G
Sbjct: 881 GPPGPASPPSPPGPPGPPGPKGPPGPNGCLGPPGDAGPAGNTGGAG 926
Score = 29.9 bits (64), Expect = 1.5
Identities = 32/112 (28%), Positives = 37/112 (33%), Gaps = 2/112 (1%)
Frame = -3
Query: 427 PGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPR-SPFSPLIPIA-PC 254
PG P +PG P GP P P T +P P P P
Sbjct: 209 PGPPGLPGAP-GPKGP--PGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGLPG 265
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIP 98
P G+ P P P +PG P P PG P GP P P+ P
Sbjct: 266 PNGILGPPGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGP 317
Score = 29.5 bits (63), Expect = 2.0
Identities = 35/115 (30%), Positives = 38/115 (33%), Gaps = 4/115 (3%)
Frame = -3
Query: 427 PGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPLIPIAP--- 257
PG PG P GPG P PL P P
Sbjct: 148 PGDVGPPGNPGGPG--------------LQGNHGNPAGIQGPNGLPGPNGPLGPPGPPGD 193
Query: 256 -CPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPG 95
PPGLP P+ P P P PG+P P PG P GP + P P PG
Sbjct: 194 MGPPGLPG-PQGPQMP--PGPPGLPGAPGPKGPPGTNGPLGPPGDVGP--PGNPG 243
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQ 134
G G G G PG +G GP G G G G G Q
Sbjct: 893 GPPGPPGPKGPPGPNGCLGPPGDAGPAGNTGGAGCQ 928
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Frame = -3
Query: 286 PFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG----PWSPLS 119
P P P PPG P P P P P P GP P PG P P G P +P
Sbjct: 30 PPPPPYEAPPPPPGPPGPDGPPGFP-GPQGPNGPKGP--PGLPGPPGPPGFQGPPGNPAG 86
Query: 118 PFSPV-IPG 95
P +PG
Sbjct: 87 AIGPPGLPG 95
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSP 125
P G P P P P + PG P G P PG P P G P
Sbjct: 62 PKGPPGLPGPPGPPGFQGPPGNPAGAIGP--PGLPGPNGVNGP 102
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 82.2 bits (194), Expect = 3e-16
Identities = 51/135 (37%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERG 233
G PG G QG G G G KGD+GD GP G PGE G +G
Sbjct: 2 GPPGVKGPQGDNGRDGPIGPKGDQGDIGP--QGPPGERGFSGKDGLNGTPGKDGPEGPQG 59
Query: 234 LDGRPGGQGAIGM---------SGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKG 383
G G GA+G G+KGD+G G G+ G+PG +G+KGE G KG
Sbjct: 60 PKGDSGSPGAVGSPGPMGPEGPKGDKGDKGDTGAPGIDGQPGPQGEKGETGPQGEQGPKG 119
Query: 384 EPGPRGVPGIDGLPG 428
+ GP+G PG +G G
Sbjct: 120 DTGPQGQPGPEGPQG 134
Score = 77.8 bits (183), Expect = 6e-15
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G++G G++G+ G PG DG +GP G G +G G G GP+G G G+
Sbjct: 32 GPPGERGFSGKDGLNGTPGKDGPEGPQGPKGDSGSPGAVGSPGPMGPEGPKGDKGDKGDT 91
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G G+DG+PG QG G +G +G++G G +G G+PG +G +G PA
Sbjct: 92 ------------GAPGIDGQPGPQGEKGETGPQGEQGPKGDTGPQGQPGPEGPQG-PA-- 136
Query: 366 VYGQKGEPGPRGVPGIDGLP 425
G G GP+G + P
Sbjct: 137 --GPSGADGPQGPEDLKAHP 154
Score = 50.8 bits (116), Expect = 8e-07
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
+G +G KG+ G +G G PG DG GP G G TG +G++G +G G G PG
Sbjct: 76 MGPEGPKGDKGDKGDTGAPGIDGQPGPQGEKGETGPQGEQGPKGDTGPQGQPG 128
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 81.0 bits (191), Expect = 6e-16
Identities = 54/155 (34%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G++G+ G G G G G GP G PG+ GE+G G GP G G PG
Sbjct: 12 GVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSR 71
Query: 186 XXXXXXXXXXXRGERGLD--GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD----- 344
+G G G PG G G G +G G PG G+ G G KGD
Sbjct: 72 GDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLG 131
Query: 345 -KGEPAAV------VYGQKGEPGPRGVPGIDGLPG 428
KG+P + G G PG +G+PG+ G PG
Sbjct: 132 PKGQPGSPGIDIPGPKGMDGPPGEKGLPGVQGDPG 166
Score = 77.4 bits (182), Expect = 8e-15
Identities = 59/154 (38%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A+G+KG G LG +G G PG D GP G G GEKG G QG G P
Sbjct: 120 AMGKKGDTGPLGPKGQPGSPGID-IPGPKGMDGPPGEKGLPGVQGDPGIKGP----KAEP 174
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDR-----------GFPGRSGLTGEP 329
+GE G G G QG IG G G + G PG G GE
Sbjct: 175 PFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGET 234
Query: 330 GYKGDKGEPAA-VVYGQKGEPGPRGVPGIDGLPG 428
G +G GEP A V G G G RG G+DG PG
Sbjct: 235 GPRGRPGEPGADGVRGPDGSTGERGETGLDGAPG 268
Score = 75.4 bits (177), Expect = 3e-14
Identities = 49/143 (34%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Frame = +3
Query: 24 KGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXX 200
+G G +G AG PG +G GP G PG G G G++G G G G+
Sbjct: 11 QGVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGS 70
Query: 201 XXXXXXRGERGLDGRPGGQ-----GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G G G PG Q G +G +G G +G PG G+ G G G KG+ +
Sbjct: 71 RGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPL 130
Query: 366 VYGQKGEPGPRG--VPGIDGLPG 428
G KG+PG G +PG G+ G
Sbjct: 131 --GPKGQPGSPGIDIPGPKGMDG 151
Score = 65.7 bits (153), Expect = 3e-11
Identities = 50/124 (40%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +3
Query: 63 GNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXXXXRGERGLD 239
G G QG G PG G G +G GP G GLPGE RG G+
Sbjct: 12 GVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGE------------------RGTGGVP 53
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G G QGA G GFPG G TG+ G G KG P A YG G G G PG G
Sbjct: 54 GPKGKQGA------PGTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQG 107
Query: 420 LPGS 431
PG+
Sbjct: 108 SPGA 111
Score = 60.1 bits (139), Expect = 1e-09
Identities = 45/126 (35%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFP-------------GITGEKGDKGDQGPVGY 149
G KG G G +G+ G G+ G +GP P G G G+ GDQGP+G
Sbjct: 145 GPKGMDGPPGEKGLPGVQGDPGIKGPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPIGP 204
Query: 150 -GLPGEXXXXXXXXXXXXX--XXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLT 320
G PG RGE G GRPG GA G+ G G G G +GL
Sbjct: 205 PGRPGPKGPKDTCPRCPPGPPGPKGKRGETGPRGRPGEPGADGVRGPDGSTGERGETGLD 264
Query: 321 GEPGYK 338
G PG K
Sbjct: 265 GAPGKK 270
Score = 59.3 bits (137), Expect = 2e-09
Identities = 45/144 (31%), Positives = 51/144 (35%), Gaps = 4/144 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G+ G G +G G PG G G G G TG G KG G G +PG
Sbjct: 95 GPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPG 154
Query: 189 XXXXXXXXXXRGERGLDGRPG----GQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G +G P G+ GE G G G G G PG G KG
Sbjct: 155 EKGLPGVQGDPGIKGPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPGPKGPK 214
Query: 357 AAVVYGQKGEPGPRGVPGIDGLPG 428
G PGP+G G G G
Sbjct: 215 DTCPRCPPGPPGPKGKRGETGPRG 238
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 80.6 bits (190), Expect = 8e-16
Identities = 55/161 (34%), Positives = 59/161 (36%), Gaps = 2/161 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G KG G G G G G+ GA GP G G TG KGD G GP G G G
Sbjct: 148 GPKGDTGATGPTGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGPAGPTGPKGDTGAT 207
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
+G G G G G +G KGD G G +G TG G KGD G
Sbjct: 208 GPTDPTGPTGPKGPTGPKGEIGATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATGPT 267
Query: 366 -VYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGD 485
G G GP G G G G KGD
Sbjct: 268 GPKGDTGATGPAGPTGPTGPKGDTGATGPAGPTGPTGPKGD 308
Score = 77.4 bits (182), Expect = 8e-15
Identities = 53/143 (37%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXX 194
G KG+ G G G G+ GA GPTG G TG G G GP G G G
Sbjct: 4 GPKGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPKGDT 63
Query: 195 XXXXXXXXRGERGLDGRPGGQ---GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG--EPA 359
+G+ G G G + GA G +G KGD G G +G TG G KGD G +P
Sbjct: 64 GATGPTGPKGDTGATGPTGPKGDTGATGPNGPKGDTGATGPAGPTGPTGPKGDTGPTDPT 123
Query: 360 AVVYGQKGEPGPRGVPGIDGLPG 428
G G GP G G G G
Sbjct: 124 G-PNGDTGATGPTGPKGDTGATG 145
Score = 77.0 bits (181), Expect = 1e-14
Identities = 52/139 (37%), Positives = 58/139 (41%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A G G KG+ G G G G+ GA GP G G TG KGD G P G G+
Sbjct: 77 ATGPTGPKGDTGATGPNGPKGDTGATGPAGPTGPTGPKGDTGPTDPTGPN--GDTGATGP 134
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G G G G G G +G KGD G G +G TG G KGD G A
Sbjct: 135 TGPKGDTGAT---GPTGPKGDTGATGPTGPTGPKGDTGATGPAGPTGPTGPKGDTG--AT 189
Query: 363 VVYGQKGEPGPRGVPGIDG 419
G G GP+G G G
Sbjct: 190 GPAGPAGPTGPKGDTGATG 208
Score = 68.5 bits (160), Expect = 4e-12
Identities = 52/146 (35%), Positives = 56/146 (38%), Gaps = 7/146 (4%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG----YGLPGEXX 170
A G G G G +G G G G GPTG G TG G GP G G GE
Sbjct: 170 ATGPAGPTGPTGPKGDTGATGPAGPAGPTGPKGDTGATGPTDPTGPTGPKGPTGPKGEIG 229
Query: 171 XXXXXXXX---XXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG 341
G G G G GA G +G KGD G G +G TG G KG
Sbjct: 230 ATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKG 289
Query: 342 DKGEPAAVVYGQKGEPGPRGVPGIDG 419
D G A G G GP+G G G
Sbjct: 290 DTG--ATGPAGPTGPTGPKGDTGATG 313
Score = 63.3 bits (147), Expect = 1e-10
Identities = 40/121 (33%), Positives = 47/121 (38%), Gaps = 1/121 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G KG+ G G G G +GPTG G G G GP G G G
Sbjct: 196 GPTGPKGDTGATGPTDPTGPTGPKGPTGPKGEIGATGPTDPTGPKGDTGATGPTGPTGPT 255
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G +G G G G G +G KGD G G +G TG G KGD G +
Sbjct: 256 GPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPL 315
Query: 366 V 368
+
Sbjct: 316 I 316
Score = 51.6 bits (118), Expect = 4e-07
Identities = 38/112 (33%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Frame = +3
Query: 105 TGEKGDKGDQGPVG----YGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGM 272
TG KGD G GP G G G +G+ G G G G G
Sbjct: 3 TGPKGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPKGD 62
Query: 273 SGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
+G G G G +G TG G KGD G A G KG+ G G G G G
Sbjct: 63 TGATGPTGPKGDTGATGPTGPKGDTG--ATGPNGPKGDTGATGPAGPTGPTG 112
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 80.6 bits (190), Expect = 8e-16
Identities = 52/147 (35%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGI-AGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
G G +G G G AG PG DG GP G G G GD G GP+G G +
Sbjct: 1698 GLPGPQGIPGYPGAPAGPPGRDGPMGPPGPSGGQGPPGDMGSMGPMGMGGEHKDFKRSAS 1757
Query: 186 XXXXXXXXXXXRGER-GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP---GYKGDKGE 353
G G G G G++G +G +G PG G G P G+KG+ G
Sbjct: 1758 AQVGQYGYPSQAASYIGTQGASGVDGPPGLAGPQGPKGMPGPPGPPGPPGAIGWKGNPGN 1817
Query: 354 PAAV--VYGQKGEPGPRGVPGIDGLPG 428
PA + G G PGP+G G G+PG
Sbjct: 1818 PAGPPGLDGPPGPPGPQGPKGWPGVPG 1844
Score = 68.5 bits (160), Expect = 4e-12
Identities = 53/155 (34%), Positives = 60/155 (38%), Gaps = 15/155 (9%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITG-EKGDKGDQGPV-------GYGLPGE 164
G G G G +G G PG G GP G PG G G G GP+ G G PG+
Sbjct: 1677 GPMGLPGPQGPDGPKGPPGPPGLPGPQGIPGYPGAPAGPPGRDGPMGPPGPSGGQGPPGD 1736
Query: 165 XXX-----XXXXXXXXXXXXXXXRGERGLDGRPGGQ-GAIGMSGEKGDRGFPGRSGLTGE 326
G+ G + G G SG G G G G G
Sbjct: 1737 MGSMGPMGMGGEHKDFKRSASAQVGQYGYPSQAASYIGTQGASGVDGPPGLAGPQGPKGM 1796
Query: 327 PGYKGDKGEPAAVVYGQKGEPG-PRGVPGIDGLPG 428
PG G G P A+ G KG PG P G PG+DG PG
Sbjct: 1797 PGPPGPPGPPGAI--GWKGNPGNPAGPPGLDGPPG 1829
Score = 66.5 bits (155), Expect = 1e-11
Identities = 52/134 (38%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+G +G G G G+AG G G GP G PG G G KG+ G G PG
Sbjct: 1773 IGTQGASGVDGPPGLAGPQGPKGMPGPPGPPGPPGAIGWKGNPGNPA-GPPG------LD 1825
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGD-RGFPGRSGLTGEPGYKGDKGEPAA 362
+G G+ G PG GA G G G+ G PGR G+ G PG +G KG PA
Sbjct: 1826 GPPGPPGPQGPKGWPGVPGPPGPPGAYGWKGYPGNPAGPPGRDGIPGPPGRQGGKG-PA- 1883
Query: 363 VVYGQKGEPGPRGV 404
G G PGP GV
Sbjct: 1884 ---GIPGIPGPGGV 1894
Score = 63.7 bits (148), Expect = 1e-10
Identities = 49/135 (36%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXX 203
G G G+ G PG G QGP G PG G G G +G+ G PG
Sbjct: 1774 GTQGASGVDGPPGLAGPQGPKGMPG---PPGPPGPPGAIGWKGNPGNPAGPPGLDGPPGP 1830
Query: 204 XXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKG 383
G +G G PG G G G G +G+PG G PG G G P G++G
Sbjct: 1831 P-----GPQGPKGWPGVPGPPGPPGAYGWKGYPGNPA--GPPGRDGIPGPP-----GRQG 1878
Query: 384 EPGPRGVPGIDGLPG 428
GP G+PGI G PG
Sbjct: 1879 GKGPAGIPGIPG-PG 1892
Score = 56.8 bits (131), Expect = 1e-08
Identities = 48/130 (36%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Frame = +3
Query: 60 PGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLD 239
PG G GP G PG G G KG GP GLPG G G D
Sbjct: 1670 PGPPGPDGPMGLPGPQGPDGPKGPPGPP--GLPGPQGIPGYPGAPA--------GPPGRD 1719
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEP-------GPR 398
G G G G G GD G G G+ GE +K K +A V GQ G P G +
Sbjct: 1720 GPMGPPGPSGGQGPPGDMGSMGPMGMGGE--HKDFKRSASAQV-GQYGYPSQAASYIGTQ 1776
Query: 399 GVPGIDGLPG 428
G G+DG PG
Sbjct: 1777 GASGVDGPPG 1786
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/106 (36%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 ALGQKGQKGE-LGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXX 179
A+G KG G G G+ G PG G QGP G+PG+ G G G G GY PG
Sbjct: 1808 AIGWKGNPGNPAGPPGLDGPPGPPGPQGPKGWPGVPGPPGPPGAYGWKGY--PGNPA--- 1862
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGL 317
G G DG PG G G G G G PG G+
Sbjct: 1863 --------------GPPGRDGIPGPPGRQGGKGPAGIPGIPGPGGV 1894
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYG 152
G G KG G AG PG DG GP G G G G G GP G G
Sbjct: 1850 GAYGWKGYPGNP--AGPPGRDGIPGPPGRQGGKGPAGIPGIPGPGGVG 1895
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 250 PGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFS-PVIPG 95
PG+P P P + W PG P GP P G P P G P P IPG
Sbjct: 1840 PGVPGPPGPPGAYGWKGYPGNPAGP--PGRDGIPGPPGRQGGKGPAGIPGIPG 1890
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 92
P G P P P P PG P GP PG P GP P P PG+
Sbjct: 1690 PKGPPGPPGLPGPQGIPGYPGAPAGP-----PGRDGPMGPPGPSGGQGP--PGD 1736
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 259 PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSP-GNP*PTGPWSPLSP 116
P PPGLP P P P P GP P P G P G + P
Sbjct: 1694 PGPPGLPGPQGIPGYPGAPAGPPGRDGPMGPPGPSGGQGPPGDMGSMGP 1742
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 78.6 bits (185), Expect = 3e-15
Identities = 48/131 (36%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXX 185
G G G GR G+ G+PG DG P G PG G G +G GP G G PG
Sbjct: 125 GPAGSPGMPGRNGLDGRPGMDG---PMGMPGRDGTNGKEGSPGPPGAPGPPGVNGLQGLQ 181
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G++G+ G PG +G G +G G+ G PG G TG G KGDKG
Sbjct: 182 GERGPIGPKGLMGDKGVQGLPGPKGDRGPTGLSGENGEPGARGDTGRKGEKGDKGVATCY 241
Query: 366 VYGQKGEPGPR 398
V ++G P+
Sbjct: 242 V-TKRGRRTPK 251
Score = 70.5 bits (165), Expect = 9e-13
Identities = 48/124 (38%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXX 212
G G AG PG G G G PG+ G G G G G G PG
Sbjct: 122 GPRGPAGSPGMPGRNGLDGRPGMDGPMGMPGRDGTNGKEGSPGPPGAPGPPGVNGLQGLQ 181
Query: 213 XXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 392
RG G G G +G G+ G KGDRG G SG GEPG +GD G+KGE G
Sbjct: 182 GERGPIGPKGLMGDKGVQGLPGPKGDRGPTGLSGENGEPGARGDT--------GRKGEKG 233
Query: 393 PRGV 404
+GV
Sbjct: 234 DKGV 237
Score = 61.3 bits (142), Expect = 5e-10
Identities = 45/132 (34%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Frame = +3
Query: 39 REGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXX 215
RE + + + G +GP G PG+ G G G G G G+PG
Sbjct: 111 REELERRRYSTGPRGPAGSPGMPGRNGLDGRPGMDGPMGMPGRD---------------- 154
Query: 216 XRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP 395
G G +G PG GA G G G +G G G G G GDKG + G KG+ GP
Sbjct: 155 --GTNGKEGSPGPPGAPGPPGVNGLQGLQGERGPIGPKGLMGDKGVQG--LPGPKGDRGP 210
Query: 396 RGVPGIDGLPGS 431
G+ G +G PG+
Sbjct: 211 TGLSGENGEPGA 222
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3
Query: 303 GRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
G G G PG G G + G+ G GP G+PG DG G +
Sbjct: 122 GPRGPAGSPGMPGRNG-----LDGRPGMDGPMGMPGRDGTNGKE 160
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 77.0 bits (181), Expect = 1e-14
Identities = 55/147 (37%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGA--------QGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXX 179
G+LG G G+ G GA QG G G GE GDKG G G G G+
Sbjct: 214 GDLGAAGPQGEAGPTGATFIMAFVFQGNVGKSGSKGESGDKGQPGKPGKPGSRGQAGPAG 273
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGE---PGYKGDKG 350
G +G G PG GA G GE+G RG PG+ G G PG GD G
Sbjct: 274 KRGMIGDRGVRGAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPGADGPEGLPGPAGDDG 333
Query: 351 EPAAVVYGQKGEPGPRGVPGIDGLPGS 431
P G+ G PG RG G G PG+
Sbjct: 334 RP-----GENGAPGSRGNSGPAGFPGA 355
Score = 74.9 bits (176), Expect = 4e-14
Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G KG+ G+ G+ G G+PG+ G GP G G+ G++G +G +G G G PG
Sbjct: 246 GSKGESGDKGQPGKPGKPGSRGQAGPAGKRGMIGDRGVRGAEGNKGESGAPG-------- 297
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
G RG G+PG G G+ G GD G PG +G G G G G P A
Sbjct: 298 -LIGAEGPVGEEGGRGRPGKPGADGPEGLPGPAGDDGRPGENGAPGSRGNSGPAGFPGA 355
Score = 62.5 bits (145), Expect = 2e-10
Identities = 51/139 (36%), Positives = 55/139 (39%), Gaps = 1/139 (0%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
GQ G G GI G G G QGP G G G G G GP G G
Sbjct: 1 GQVGLPGLNGIDGPEGERGQQGPIGMTGPPGLAGGVGANGPSGRG--------------- 45
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG-EPAAVVYG 374
G G PG GA G G +G +G PGR+G TG GY G+ G A G
Sbjct: 46 -----------GSQGPPGPPGAPGQPGPRGIKGPPGRAGGTGLMGYLGEPGVVGGAGPKG 94
Query: 375 QKGEPGPRGVPGIDGLPGS 431
G PG G G G GS
Sbjct: 95 SSGRPGDVGQAGASGPKGS 113
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/110 (33%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +3
Query: 117 GDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGE---RGLDGRPGGQGAIGMSGEKG 287
GD G GP G P +GE +G G+PG G+ G +G G
Sbjct: 214 GDLGAAGPQGEAGPTGATFIMAFVFQGNVGKSGSKGESGDKGQPGKPGKPGSRGQAGPAG 273
Query: 288 DRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGPRGVPGIDGLPGSD 434
RG G G+ G G KG+ G P + G GE G RG PG G G +
Sbjct: 274 KRGMIGDRGVRGAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPGADGPE 323
Score = 57.2 bits (132), Expect = 9e-09
Identities = 33/94 (35%), Positives = 39/94 (41%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+G G G G G G G G+QGP G PG G+ G +G +GP PG
Sbjct: 24 IGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQPGPRGIKGP-----PGRAGGTGLM 78
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKG 287
G +G GRPG G G SG KG
Sbjct: 79 GYLGEPGVVGGAGPKGSSGRPGDVGQAGASGPKG 112
Score = 57.2 bits (132), Expect = 9e-09
Identities = 39/103 (37%), Positives = 45/103 (43%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+G +G +G G +G +G PG GA+GP G G G G G GP GLPG
Sbjct: 278 IGDRGVRGAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPGADGP--EGLPGPA------ 329
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSG 314
G DGRPG GA G G G GFPG G
Sbjct: 330 ---------------GDDGRPGENGAPGSRGNSGPAGFPGAKG 357
Score = 56.4 bits (130), Expect = 2e-08
Identities = 44/131 (33%), Positives = 55/131 (41%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G +GE G++G G G G G G G +G G +G GP G PG+
Sbjct: 10 GIDGPEGERGQQGPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPP--GAPGQ-------- 59
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
G RG+ G PG G G+ G+ G G+ G G KG G P V
Sbjct: 60 ----------PGPRGIKGPPGRAGGTGL------MGYLGEPGVVGGAGPKGSSGRPGDV- 102
Query: 369 YGQKGEPGPRG 401
GQ G GP+G
Sbjct: 103 -GQAGASGPKG 112
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
A G G +G +G EG G+PG GA GP G PG G+ G G+ G G
Sbjct: 295 APGLIGAEGPVGEEGGRGRPGKPGADGPEGLPGPAGDDGRPGENGAPG 342
Score = 40.7 bits (91), Expect = 8e-04
Identities = 33/103 (32%), Positives = 41/103 (39%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A G KG+ G G G G G +G +G G PG G +G G G G PGE
Sbjct: 286 AEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPGADGPEGLPGPAG--DDGRPGE------ 337
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRS 311
RG G G PG +G + + +G F G S
Sbjct: 338 ------NGAPGSRGNSGPAGFPGAKGKVVSTCSRGSSIFNGGS 374
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/73 (31%), Positives = 27/73 (36%)
Frame = +3
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSDXXXXX 449
MSG+ G G G +G TG + G KGE G +G P G PG
Sbjct: 212 MSGDLGAAGPQGEAGPTGATFIMAFVFQGNVGKSGSKGESGDKGQP---GKPGKPGSRGQ 268
Query: 450 XXXXXXXXMKGDR 488
M GDR
Sbjct: 269 AGPAGKRGMIGDR 281
>SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45)
Length = 577
Score = 74.9 bits (176), Expect = 4e-14
Identities = 48/138 (34%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPG---NDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXX 176
G KG+ G +G +G+ G+ G +DG +GP G G G G G GP+G G G
Sbjct: 203 GLKGETGPIGGQGLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGEPGRKGSPGDI 262
Query: 177 XXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
+G G+ G G G IG SG KG G G G G G +G KG
Sbjct: 263 GYVGPKGKLGDRGPQGPVGIKGIRGASGPIGDSGIKGGYGLMGEKGTAGRLGERGKKGPF 322
Query: 357 AAVVYGQKGEPGPRGVPG 410
++ G G PG G PG
Sbjct: 323 GSI--GDMGPPGEPGKPG 338
Score = 65.7 bits (153), Expect = 3e-11
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGF---PGITGEKGDKGDQGPVGY----GLPGEX 167
G +G+ G G +GI G G G GPTG PG GE G KG G +GY G G+
Sbjct: 215 GLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGEPGRKGSPGDIGYVGPKGKLGDR 274
Query: 168 XXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDK 347
G+ G+ G G G G +G G+RG G G G+ G G+
Sbjct: 275 GPQGPVGIKGIRGASGPIGDSGIKGGYGLMGEKGTAGRLGERGKKGPFGSIGDMGPPGEP 334
Query: 348 GEPAAVV 368
G+P ++
Sbjct: 335 GKPGEIL 341
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/114 (37%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +3
Query: 90 GFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAI 266
G GEKG KG+ GP+G GL G G RG G+ GG G
Sbjct: 194 GLKAKDGEKGLKGETGPIGGQGLEGRTGVQGDD------------GIRGPQGKQGGVGPT 241
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G G G G PGR G G+ GY G KG+ G +G GP G+ GI G G
Sbjct: 242 GGHGPPGPMGEPGRKGSPGDIGYVGPKGK-----LGDRGPQGPVGIKGIRGASG 290
Score = 61.3 bits (142), Expect = 5e-10
Identities = 51/148 (34%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPV----------GYGLP--- 158
G K + G +G+ G+ G G QG G TG +GD G +GP G+G P
Sbjct: 194 GLKAKDGEKGLKGETGPIGGQG---LEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPM 250
Query: 159 GEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYK 338
GE G+RG G G +G G SG GD G G GL GE G
Sbjct: 251 GEPGRKGSPGDIGYVGPKGKLGDRGPQGPVGIKGIRGASGPIGDSGIKGGYGLMGEKGTA 310
Query: 339 GDKGEPAAV-VYGQKGEPGPRGVPGIDG 419
G GE +G G+ GP G PG G
Sbjct: 311 GRLGERGKKGPFGSIGDMGPPGEPGKPG 338
Score = 59.3 bits (137), Expect = 2e-09
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +3
Query: 63 GNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDG 242
G +G +GP G PG++G KG+ G +G +G +G+RG G
Sbjct: 2 GLEGDRGPIGKPGVSGTKGNIGAKGRIGL-----------------------QGDRGEQG 38
Query: 243 RPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG-EPAAVVYGQKGEPGP 395
G +GA G G KG G PG G G GY+G +G E + VYG KG GP
Sbjct: 39 PFGPKGAGGEMGSKGPPGVPGEVGKPGPIGYQGREGSEGSTGVYGMKGMKGP 90
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/115 (34%), Positives = 53/115 (46%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
+G +G +G +G+ G++G GN GA+G G +GD+G+QGP G G
Sbjct: 1 MGLEGDRGPIGKPGVSGTKGNIGAKGRIGL------QGDRGEQGPFGPKGAG-------- 46
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
GE G G PG G +G G G +G G G TG G KG KG
Sbjct: 47 ------------GEMGSKGPPGVPGEVGKPGPIGYQGREGSEGSTGVYGMKGMKG 89
Score = 54.4 bits (125), Expect = 6e-08
Identities = 31/66 (46%), Positives = 37/66 (56%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPG 410
GL+G G G G+SG KG+ G GR GL G+ G +G G A G+ G GP GVPG
Sbjct: 2 GLEGDRGPIGKPGVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAG--GEMGSKGPPGVPG 59
Query: 411 IDGLPG 428
G PG
Sbjct: 60 EVGKPG 65
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 LGQKGQK---GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLPGEXXX 173
+G+ G+K G++G G G+ G+ G QGP G GI G G GD G GYGL GE
Sbjct: 250 MGEPGRKGSPGDIGYVGPKGKLGDRGPQGPVGIKGIRGASGPIGDSGIKGGYGLMGEKGT 309
Query: 174 XXXXXXXXXXXXXXXRGERGLDGRPGGQGAI 266
G+ G G PG G I
Sbjct: 310 AGRLGERGKKGPFGSIGDMGPPGEPGKPGEI 340
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/87 (36%), Positives = 36/87 (41%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G+RG G+PG G G G KG G G G G G KG GE + G G PG G
Sbjct: 5 GDRGPIGKPGVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSK--GPPGVPGEVG 62
Query: 402 VPGIDGLPGSDXXXXXXXXXXXXXMKG 482
PG G G + MKG
Sbjct: 63 KPGPIGYQGREGSEGSTGVYGMKGMKG 89
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP 158
G+ G KG G G G+PG G QG G G TG G KG +GP+ LP
Sbjct: 47 GEMGSKGPPGVPGEVGKPGPIGYQGREGSEGSTGVYGMKGMKGPIVSKLP 96
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +3
Query: 264 IGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
+G+ G++G G PG SG G G KG G + G +GE GP G G G GS
Sbjct: 1 MGLEGDRGPIGKPGVSGTKGNIGAKGRIG-----LQGDRGEQGPFGPKGAGGEMGS 51
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 73.7 bits (173), Expect = 1e-13
Identities = 54/156 (34%), Positives = 68/156 (43%), Gaps = 17/156 (10%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXX 188
++G++G GR G G G +G +G TG PG G G G GP+G G PG+
Sbjct: 112 KRGKRGSRGRTGAKGSRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIPG 171
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRG---------FPGRSGLTGEPGYKG 341
+G GL G PG G G K + G PG+ G G G +G
Sbjct: 172 MKGDKGDPGKQGLTGLTGAPGSPGLPGNCINKSNVGSVASPSFYCLPGKLGPQGPKGARG 231
Query: 342 DKGEPA-AVVYGQK---GEPGP---RGVPGIDGLPG 428
G A + G K G+PGP RG PG GLPG
Sbjct: 232 ITGPKGDAGITGPKGTPGDPGPTGSRGRPGKPGLPG 267
Score = 72.9 bits (171), Expect = 2e-13
Identities = 50/135 (37%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY----GLPGEXXXX 176
G G G GR G+ G G G G G PGI G KGDKGD G G G PG
Sbjct: 138 GLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIPGMKGDKGDPGKQGLTGLTGAPGSPGLP 197
Query: 177 XXXXXXXXXXXXXXRGERGLDGRPGGQ---GAIGMSGEKGDRGFPGRSGLTGEPGYKGDK 347
L G+ G Q GA G++G KGD G G G G+PG G +
Sbjct: 198 GNCINKSNVGSVASPSFYCLPGKLGPQGPKGARGITGPKGDAGITGPKGTPGDPGPTGSR 257
Query: 348 GEPAAVVYGQKGEPG 392
G P G+ G PG
Sbjct: 258 GRP-----GKPGLPG 267
Score = 64.1 bits (149), Expect = 8e-11
Identities = 34/71 (47%), Positives = 41/71 (57%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
RG+ GL G G G G+ G G G PG+ GL G PG KGDKG+P G++G G
Sbjct: 134 RGKTGLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIPGMKGDKGDP-----GKQGLTGLT 188
Query: 399 GVPGIDGLPGS 431
G PG GLPG+
Sbjct: 189 GAPGSPGLPGN 199
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
G KG G G +G G PG G++G G PG+ G+ + G
Sbjct: 234 GPKGDAGITGPKGTPGDPGPTGSRGRPGKPGLPGDLNNIG 273
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
A G G KG+ G G G PG+ G G G PG G GD + G
Sbjct: 229 ARGITGPKGDAGITGPKGTPGDPGPTGSRGRPGKPGLPGDLNNIG 273
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 70.9 bits (166), Expect = 7e-13
Identities = 51/133 (38%), Positives = 57/133 (42%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
G G G+ GI G PG G GP G G+ G G G QGP G PG+
Sbjct: 122 GIPGTHGKNGIPGHPGPPGPSGPPGRNGLNGIPGVSGKQGPPGP--PGK----------- 168
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQ 377
RG RG G PG G G G +G G G G G PG G G+P G+
Sbjct: 169 -------RGRRGHPGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQP-----GK 216
Query: 378 KGEPGPRGVPGID 416
G PG RG PG D
Sbjct: 217 AGSPGERGPPGRD 229
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/117 (35%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Frame = +3
Query: 87 TGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGA 263
+G PG G+ G G GP G G PG +G G G+ G +G
Sbjct: 121 SGIPGTHGKNGIPGHPGPPGPSGPPGRNGLNGIPGVSGK------QGPPGPPGKRGRRGH 174
Query: 264 IGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
G G G G PG G TG G G G P G G+PG G PG G PG D
Sbjct: 175 PGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTP--GVPGQPGKAGSPGERGPPGRD 229
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
G++G G G+ G G PG G G G PG G+ G +G GP+G G PG
Sbjct: 158 GKQGPPGPPGKRGRRGHPGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPG 209
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGE 164
G++G GE GR G G PG G GP G G G G G G G G PGE
Sbjct: 170 GRRGHPGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQPGKAGSPGE 222
Score = 39.9 bits (89), Expect = 0.001
Identities = 33/100 (33%), Positives = 37/100 (37%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G+ G G G G G PG G +G G PG G G G G G P
Sbjct: 146 GRNGLNGIPGVSGKQGPPGPPGKRGRRGHPGEPGRNGTHGSPGWRGKTGP---------- 195
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGR 308
G G G PG G G +G G+RG PGR
Sbjct: 196 -------RGPMGPIGPPGTPGVPGQPGKAGSPGERGPPGR 228
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -3
Query: 250 PGLPSK--PRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGP 134
PG K PR P+ P P PG P P P G+P GP
Sbjct: 187 PGWRGKTGPRGPMGPIGP--PGTPGVPGQPGKAGSPGERGP 225
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGPR 398
G G G PG G +GM+G G G G G G PG G G P A + G+KG+PG +
Sbjct: 85 GPPGAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGLQ 144
Query: 399 GVPGIDGLPGS 431
G PG GLPG+
Sbjct: 145 GAPGAAGLPGA 155
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/69 (44%), Positives = 38/69 (55%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G+ G+ G PG G +G G G G PG G G PG G+KG+P G +G PG G
Sbjct: 97 GQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDP-----GLQGAPGAAG 151
Query: 402 VPGIDGLPG 428
+PG GLPG
Sbjct: 152 LPGAPGLPG 160
Score = 58.4 bits (135), Expect = 4e-09
Identities = 45/122 (36%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXXXX 218
+G+ G PG GA GP G PG G G G G VG G P
Sbjct: 78 KGLNGPPGPPGAPGPPGEPGQVGMAGPPGPPGHVGEDGAP-------------------- 117
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
G G G PG GA G+ GEKGD G G G G PG G G G G PGP
Sbjct: 118 -GAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGP-----QGPMGPPGPE 171
Query: 399 GV 404
+
Sbjct: 172 PI 173
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +3
Query: 228 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVP 407
+GL+G PG GA G GE G G +G G PG+ G+ G P G G PGP G P
Sbjct: 78 KGLNGPPGPPGAPGPPGEPGQVGM---AGPPGPPGHVGEDGAP-----GAPGAPGPPGSP 129
Query: 408 GIDGLPG 428
G GLPG
Sbjct: 130 GAPGLPG 136
Score = 53.6 bits (123), Expect = 1e-07
Identities = 44/126 (34%), Positives = 49/126 (38%), Gaps = 1/126 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G G G G G+PG G GP G PG GE G G G G G PG
Sbjct: 79 GLNGPPGPPGAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPG-------- 130
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G G G PG QGA G +G G G PG G G PG + +
Sbjct: 131 ----------APGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPPGPEPIMPNFTVI 180
Query: 366 VYGQKG 383
G+KG
Sbjct: 181 CEGEKG 186
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = -3
Query: 280 SPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVI 101
+P P AP PPG P P P P + G P P +PG P P GP P P P++
Sbjct: 116 APGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPPGP-EPIM 174
Query: 100 P 98
P
Sbjct: 175 P 175
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVY-GQKGEPGPRGVPGIDGLPGS 431
+ G G G PG G GEPG G G P + G+ G PG G PG G PG+
Sbjct: 77 LKGLNGPPGPPGAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGA 131
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/48 (43%), Positives = 22/48 (45%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
A G G G G G G PG GA G G PG G G +G GP G
Sbjct: 122 APGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPPG 169
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/54 (42%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
A G G G G G G PG G G G PG G G G GP G G PG
Sbjct: 116 APGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPPG 169
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPG 161
+G+ G G G G G PG G G G PG+ G G G G GLPG
Sbjct: 111 VGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPG--APGLPG 160
Score = 31.9 bits (69), Expect = 0.38
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 259 PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLSPFSPVIPG 95
P PPG + +P +P P PG P P P G+P G P + P +P +PG
Sbjct: 105 PGPPGHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPG 160
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 64.9 bits (151), Expect = 4e-11
Identities = 41/143 (28%), Positives = 53/143 (37%), Gaps = 1/143 (0%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRS-PFSPLIPIAP 257
S P PS P TP P +P P T + S P +P P P
Sbjct: 85 STPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTP 144
Query: 256 CPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGNXXXXX 77
P PS P +P +P P+ PG P P +P +PG P P + +P +P P
Sbjct: 145 STPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGT--PITPSTLSTPSTPSTPSTRSTPS 202
Query: 76 XXXXXXXXXXXSRPSSPFCPFWP 8
S PS+P P P
Sbjct: 203 TPSTPSTPSTLSMPSTPSMPNTP 225
Score = 62.1 bits (144), Expect = 3e-10
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRS-PFSPLIPIAP 257
S P PS+P TP P +P P T + S P +P P P
Sbjct: 214 SMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTP 273
Query: 256 CPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIP 98
C P PS P +P P P P P P +P +P P P+ P +P +P +P P
Sbjct: 274 CTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTP 327
Score = 62.1 bits (144), Expect = 3e-10
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRS-PFSPLIPIAP 257
S P PS+P TP P +P P T + S P +P P P
Sbjct: 764 SMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTP 823
Query: 256 CPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIP 98
C P PS P +P P P P P P +P +P P P+ P +P +P +P P
Sbjct: 824 CTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTP 877
Score = 61.7 bits (143), Expect = 4e-10
Identities = 41/141 (29%), Positives = 52/141 (36%), Gaps = 5/141 (3%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRS----PFSPLIP 266
S PG PS P TP P +P P T S P +P P
Sbjct: 429 STPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTP 488
Query: 265 IAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIPGNX 89
P PS P +P +P P PG P P +P +PG P P+ P +P +P +P P
Sbjct: 489 STPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTP 548
Query: 88 XXXXXXXXXXXXXXXSRPSSP 26
S PS+P
Sbjct: 549 SMPSTPSTPSTPSTPSTPSTP 569
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/142 (27%), Positives = 52/142 (36%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPLIPIAPC 254
S P PS P T P +P P T + +P +P P P
Sbjct: 638 STPSTPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPS--TPSTPSTPSTPS 695
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGNXXXXXX 74
P PS P +P +P P+ PG P P +P +PG P P + +P +P P
Sbjct: 696 MPNTPSTPSTPSTPSTPITPGTPSTPSTPSAPGT--PITPSTLSTPSTPSTPSTRSTPST 753
Query: 73 XXXXXXXXXXSRPSSPFCPFWP 8
S PS+P P P
Sbjct: 754 PSTPSTPSTLSMPSTPSMPNTP 775
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/146 (26%), Positives = 53/146 (36%), Gaps = 4/146 (2%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPLIPIAPC 254
S P P P TP P +P P T + +P +P + P
Sbjct: 399 STPSTPCTPSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPS--TPSTPSLTHTPS 456
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*----PTGPWSPLSPFSPVIPGNXX 86
P PS P +P +P P P P P +P +P P P+ P +P +P +P PG
Sbjct: 457 TPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPS 516
Query: 85 XXXXXXXXXXXXXXSRPSSPFCPFWP 8
S PS+P P P
Sbjct: 517 TPSTPSAPGTPSTPSTPSTPSTPSTP 542
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/147 (28%), Positives = 53/147 (36%), Gaps = 5/147 (3%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*---P*TTAAXXXXXXXXXXXXXXXXXXXXPRS-PFSPLIP 266
S P PS P TPR P +P P T + S P +P P
Sbjct: 408 STPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTP 467
Query: 265 IAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLSPFSPVIPGNX 89
P P PS P +P +P P P P +P +P P G P +P +P +P PG
Sbjct: 468 STPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTP 527
Query: 88 XXXXXXXXXXXXXXXSRPSSPFCPFWP 8
S PS+P P P
Sbjct: 528 STPSTPSTPSTPSTPSTPSTPSMPSTP 554
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/199 (23%), Positives = 62/199 (31%), Gaps = 11/199 (5%)
Frame = -3
Query: 571 PISPRSPCIPWKXXXXXXXXXXXXXXXPRSXXXXXXXXXXXXXXXPSDPGRPSIPGTPRG 392
P +P +PC P P + PS P PS P TP+
Sbjct: 267 PSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKT 326
Query: 391 PGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPL----------IPIAPCPPGL 242
P +P P T + R F + P PC P
Sbjct: 327 PSTPCTP-NTPSTNRKKIFISALEFAFETWSMERVHFLKIDIDLVDIITSTPSTPCTPST 385
Query: 241 PSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIPGNXXXXXXXXX 65
PS P +P +P P P PC P +P +P P P P +P + +P P
Sbjct: 386 PSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPST 445
Query: 64 XXXXXXXSRPSSPFCPFWP 8
PS+P P P
Sbjct: 446 PSTPSLTHTPSTPSTPSTP 464
Score = 57.6 bits (133), Expect = 7e-09
Identities = 40/160 (25%), Positives = 56/160 (35%), Gaps = 2/160 (1%)
Frame = -3
Query: 571 PISPRSPCIPWKXXXXXXXXXXXXXXXPRSXXXXXXXXXXXXXXXPSDPGRPSIPGTPRG 392
PI+P +P P P + PS P S+P TP
Sbjct: 162 PITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSM 221
Query: 391 PGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRS-PFSPLIPIAPCPPGLPSKPRSPLS 215
P +P P T + S P +P P P P P P +P +
Sbjct: 222 PNTPSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPST 281
Query: 214 PFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIP 98
P P +P P P +P +P P P+ P +P +P +P P
Sbjct: 282 PSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTP 321
Score = 57.6 bits (133), Expect = 7e-09
Identities = 40/160 (25%), Positives = 56/160 (35%), Gaps = 2/160 (1%)
Frame = -3
Query: 571 PISPRSPCIPWKXXXXXXXXXXXXXXXPRSXXXXXXXXXXXXXXXPSDPGRPSIPGTPRG 392
PI+P +P P P + PS P S+P TP
Sbjct: 712 PITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSM 771
Query: 391 PGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRS-PFSPLIPIAPCPPGLPSKPRSPLS 215
P +P P T + S P +P P P P P P +P +
Sbjct: 772 PNTPSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPST 831
Query: 214 PFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIP 98
P P +P P P +P +P P P+ P +P +P +P P
Sbjct: 832 PSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTP 871
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 PIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIPGN 92
P PC P PS P +P +P P P PC P +P +P P P+ P +P + +P P
Sbjct: 12 PSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPST 71
Query: 91 XXXXXXXXXXXXXXXXSRPSSPFCPFWPRA 2
S PS+P P P A
Sbjct: 72 PSTPSTPCTPSTPSTPSTPSTPSTPSTPSA 101
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/89 (30%), Positives = 34/89 (38%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPLIPIAPC 254
S P PS+P TP P +P P T +P +P P P
Sbjct: 250 STPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPS--TPSTPSTPSTPS 307
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSP 167
P PS P +P +P P P PC P +P
Sbjct: 308 APSTPSTPSTPSTPSTPKTPSTPCTPNTP 336
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/89 (30%), Positives = 34/89 (38%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPLIPIAPC 254
S P PS+P TP P +P P T +P +P P P
Sbjct: 800 STPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPS--TPSTPSTPSTPS 857
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSP 167
P PS P +P +P P P PC P +P
Sbjct: 858 APSTPSTPSTPSTPSTPKTPSTPCTPNTP 886
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 63.3 bits (147), Expect = 1e-10
Identities = 45/126 (35%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXRG 224
++G G+ G QGP G GI G KG KGD G G G+ G RG
Sbjct: 192 LSGLKGDTGPQGPRGNTGIMGPKGPKGDTGNKGDQGVQG------------------LRG 233
Query: 225 ERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGV 404
G G G G +G G KGD G G G G+ G KGD+G + G G G +G
Sbjct: 234 YNGTQGPRGNTGIMGPQGPKGDTGITGPKGPKGDTGNKGDQGVQG--LRGYNGTQGAKGE 291
Query: 405 PGIDGL 422
G L
Sbjct: 292 AGTSNL 297
Score = 50.8 bits (116), Expect = 8e-07
Identities = 36/103 (34%), Positives = 45/103 (43%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G KG G G +G+ G G +G QGP G GI G +G KGD G G P
Sbjct: 215 GPKGDTGNKGDQGVQGLRGYNGTQGPRGNTGIMGPQGPKGDTGITGPKGP---------- 264
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGL 317
+G+ G G G QG G +G +G +G G S L
Sbjct: 265 ----------KGDTGNKGDQGVQGLRGYNGTQGAKGEAGTSNL 297
>SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18)
Length = 427
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/107 (37%), Positives = 50/107 (46%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXX 215
G +G G PG+ G GP PG G+KG KG +G LP +
Sbjct: 208 GSKGTPGAPGDPGLYGP---PGPPGKKGPKGPKGRTAI-LPNKAMIGAIPPFYGP----- 258
Query: 216 XRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
+G+RG+ GR G G G G KGD+G G GL G G +GD G P
Sbjct: 259 -KGDRGVPGRQGMYGLRGPPGRKGDQGTRGPPGLNGPTGAQGDSGFP 304
Score = 56.8 bits (131), Expect = 1e-08
Identities = 50/163 (30%), Positives = 64/163 (39%), Gaps = 22/163 (13%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G G+ GR+G+ G+ G DGA+G G G G G G E
Sbjct: 135 GFPGTPGDQGRQGVPGKRGYDGAKGREGEDGANGPPGSPGSANMNWKQCVFELELNKQNG 194
Query: 189 XXXXXXXXXXR--GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTG-----------EP 329
R G +G G PG G G G G +G G G T P
Sbjct: 195 IIYLEENCGMRFQGSKGTPGAPGDPGLYGPPGPPGKKGPKGPKGRTAILPNKAMIGAIPP 254
Query: 330 GY--KGDKGEPAAV-VYG------QKGEPGPRGVPGIDGLPGS 431
Y KGD+G P +YG +KG+ G RG PG++G G+
Sbjct: 255 FYGPKGDRGVPGRQGMYGLRGPPGRKGDQGTRGPPGLNGPTGA 297
Score = 56.0 bits (129), Expect = 2e-08
Identities = 54/162 (33%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQ---PGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXX 176
G +G G +G +GI G PG G QG G PG G G KG +G G G PG
Sbjct: 117 GNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKGREGEDGANGPPGSPGSA 176
Query: 177 XXXXXXXXXXXXXXR--GERGLDGRPG--GQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD 344
+ G L+ G QG+ G G GD G G G G+ G KG
Sbjct: 177 NMNWKQCVFELELNKQNGIIYLEENCGMRFQGSKGTPGAPGDPGLYGPPGPPGKKGPKGP 236
Query: 345 KGEPAAV-----------VYGQKGE---PGPRGVPGIDGLPG 428
KG A + YG KG+ PG +G+ G+ G PG
Sbjct: 237 KGRTAILPNKAMIGAIPPFYGPKGDRGVPGRQGMYGLRGPPG 278
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
G+ G KG++GFPG GL G PG KG G P G++G PG RG G G G D
Sbjct: 111 GIIGLKGNQGFPGPMGLDGIPGLKGFPGTPGD--QGRQGVPGKRGYDGAKGREGED 164
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/63 (41%), Positives = 32/63 (50%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPG 410
GL G G G +G+ G G +GFPG G G G G +G A G++GE G G PG
Sbjct: 114 GLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGA--KGREGEDGANGPPG 171
Query: 411 IDG 419
G
Sbjct: 172 SPG 174
Score = 48.0 bits (109), Expect = 5e-06
Identities = 41/129 (31%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXR 221
GI G GN G GP G GI G KG G G G G+PG+
Sbjct: 111 GIIGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKGR---------E 161
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
GE G +G PG G+ M+ ++ L + G + G KG PG G
Sbjct: 162 GEDGANGPPGSPGSANMNWKQ----CVFELELNKQNGIIYLEENCGMRFQGSKGTPGAPG 217
Query: 402 VPGIDGLPG 428
PG+ G PG
Sbjct: 218 DPGLYGPPG 226
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/54 (50%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 276 GEKGDRGFPGRSG---LTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G KGDRG PGR G L G PG KGD+G G G GP G G G PG
Sbjct: 257 GPKGDRGVPGRQGMYGLRGPPGRKGDQG-----TRGPPGLNGPTGAQGDSGFPG 305
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 237 DGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVY-GQKGEPGPRGVPGI 413
+G G +G G G G G PG G G PG +G +G P Y G KG G G G
Sbjct: 110 NGIIGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKGREGEDGANGP 169
Query: 414 DGLPGS 431
G PGS
Sbjct: 170 PGSPGS 175
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G +G G G G+ G PG G QG G PG+ G G +GD G
Sbjct: 260 GDRGVPGRQGMYGLRGPPGRKGDQGTRGPPGLNGPTGAQGDSG 302
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G G++G G G G+ G+ G +GP G G TG +GD G G
Sbjct: 263 GVPGRQGMYGLRGPPGRKGDQGTRGPPGLNGPTGAQGDSGFPG 305
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG----YGLPGE 164
G G G+ G+ G G +GP G G G +G G GP G G PGE
Sbjct: 257 GPKGDRGVPGRQGMYGLRGPPGRKGDQGTRGPPGLNGPTGAQGDSGFPGE 306
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGD 122
G G +G GR+G G G G GPTG G +G G+
Sbjct: 269 GMYGLRGPPGRKGDQGTRGPPGLNGPTGAQGDSGFPGE 306
>SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13)
Length = 456
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/107 (37%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXX 212
G +G G G++G GP G G G KGDKGD G G G PG
Sbjct: 271 GPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPG----------------- 313
Query: 213 XXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
+G++G G G +G G+ G+KGD+G G G G G+ G KGE
Sbjct: 314 -VKGDKGDTGASGAKGEAGVKGDKGDQGVMGAKGDQGIQGFNGTKGE 359
Score = 60.5 bits (140), Expect = 1e-09
Identities = 46/142 (32%), Positives = 59/142 (41%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G +G +G +G+ G PG G +G TG G G G KGD+G G
Sbjct: 277 GFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTG-------------- 322
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
+GE G+ G G QG + G KGD+G G +G GE G GD E +
Sbjct: 323 ------ASGAKGEAGVKGDKGDQGVM---GAKGDQGIQGFNGTKGEKGV-GDLSECKFKI 372
Query: 369 YGQKGEPGPRGVPGIDGLPGSD 434
PG G I+ SD
Sbjct: 373 ATGSSSPGVSGQSSIEVTEESD 394
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +3
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSDXXXXX 449
M G +G RGF G G G G KGD G + G KG+ G G G G+ G
Sbjct: 269 MEGPQGPRGFNGSEGPVGPKGLKGDPG-----LKGDKGDTGANGTAGAPGVKGDKGDTGA 323
Query: 450 XXXXXXXXMKGDR 488
+KGD+
Sbjct: 324 SGAKGEAGVKGDK 336
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKG 119
A G+ G KG+ G +G+ G G+ G QG F G GEKG
Sbjct: 326 AKGEAGVKGDKGDQGVMGAKGDQGIQG---FNGTKGEKG 361
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 60.9 bits (141), Expect = 7e-10
Identities = 46/143 (32%), Positives = 56/143 (39%), Gaps = 1/143 (0%)
Frame = +3
Query: 9 GQKGQKGELGREG-IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXX 185
G+ G KGE G +G QPG G +G G G G G+KG Q LP
Sbjct: 33 GELGAKGEKGLQGNTPDQPGPPGRRGSAGMKGEPGPAGEKGMQHRAPRCLPSFARFGTLP 92
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
+ R QG G+ G G G PG +G+ G PG GE
Sbjct: 93 VCVEIAREKPQNSRNSV--RYCQQGEAGVQGPTGPAGDPGMTGVPGFPGINAIPGEGG-- 148
Query: 366 VYGQKGEPGPRGVPGIDGLPGSD 434
+ G G PG G PG GL G +
Sbjct: 149 LPGGNGLPGNPGDPGRPGLKGEE 171
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGE 386
G G+ G PG G G G G PG G G PG KG++ A V Q +
Sbjct: 130 GMTGVPGFPGINAIPGEGGLPGGNGLPGNPGDPGRPGLKGEEFRGARKVDAQDAD 184
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = +3
Query: 282 KGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
+GD G G GE G KG+KG Q G PG RG G+ G PG
Sbjct: 20 QGDPGPAAMEGNKGELGAKGEKGLQGNTP-DQPGPPGRRGSAGMKGEPG 67
Score = 35.9 bits (79), Expect = 0.023
Identities = 34/142 (23%), Positives = 41/142 (28%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G G G GI PG G G G PG G+ G G +G G
Sbjct: 127 GDPGMTGVPGFPGINAIPGEGGLPGGNGLPGNPGDPGRPGLKGEEFRGARKVDAQDADAD 186
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
+ G D G + GD G G + G D +
Sbjct: 187 VASSAVADNGDNDDGSDDDGGDNDDGSDDDDGGDDGSDDDGGDNDDGGDNDDGSDDDGGD 246
Query: 369 YGQKGEPGPRGVPGIDGLPGSD 434
G + G G G GSD
Sbjct: 247 DGSDDDGGDDGSDDDGGDDGSD 268
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 59.3 bits (137), Expect = 2e-09
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 24 KGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLPGEXXXXXXXXXXXX 200
K L +G G PG G G G GI G KG++G QG P +G+PG
Sbjct: 160 KDRLILKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGR------------ 207
Query: 201 XXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
+GE+G GR G G G G+ G +G G G TG G KGD G
Sbjct: 208 ---IGIKGEKGKTGRKGDSGMKGDDGKIGQKGDRGERGETGFKGEKGDAG 254
Score = 54.0 bits (124), Expect = 8e-08
Identities = 42/114 (36%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = +3
Query: 72 GAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPG 251
G GP G PGI G +G +G QG G RG +G+ G G
Sbjct: 167 GDPGPPGPPGIMGRRGPRGIQGRKG-----------------------NRGVQGIPGSHG 203
Query: 252 GQGAIGMSGEKGDRGFPGRSGLTGEP---GYKGDKGEPAAVVYGQKGEPGPRGV 404
G IG+ GEKG G G SG+ G+ G KGD+GE G KGE G G+
Sbjct: 204 IPGRIGIKGEKGKTGRKGDSGMKGDDGKIGQKGDRGERGET--GFKGEKGDAGI 255
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/67 (41%), Positives = 32/67 (47%)
Frame = +3
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGI 413
L G PG G G+ G +G RG GR G G G G G P + G KGE G G G
Sbjct: 165 LKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRI--GIKGEKGKTGRKGD 222
Query: 414 DGLPGSD 434
G+ G D
Sbjct: 223 SGMKGDD 229
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G KG+KG+ GR+G +G G+DG G G G GE G KG++G G
Sbjct: 208 IGIKGEKGKTGRKGDSGMKGDDGKIGQKGDRGERGETGFKGEKGDAG 254
Score = 47.2 bits (107), Expect = 1e-05
Identities = 43/136 (31%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQG---PTGFPGITGEKGDKGDQGPVG-YGLPGEXXXX 176
G G G G GI G+ GN G QG G PG G KG+KG G G G+ G+
Sbjct: 173 GPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTGRKGDSGMKGDD--- 229
Query: 177 XXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP--GYKGDKG 350
G+ G G G +G G GEKGD G R+ +P G
Sbjct: 230 ---------------GKIGQKGDRGERGETGFKGEKGDAGISVRAPTITQPPKSLITIAG 274
Query: 351 EPAAVVYGQKGEPGPR 398
E + +G P P+
Sbjct: 275 ETIFLTCSSEGLPSPK 290
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 58.8 bits (136), Expect = 3e-09
Identities = 42/142 (29%), Positives = 50/142 (35%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPLIPIAPC 254
SDP PS P P GP P P + P P P P AP
Sbjct: 143 SDPTGPSDPTAPTGPSDPTGP--SDPTVSSDPTGPSDPTGPSDPTAPSDPTGPSDPTAPT 200
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGNXXXXXX 74
P P+ P P P P P P GP P +P + PTGP P +P P P +
Sbjct: 201 GPSDPTGPSDPTGPSDPTGPSDPTGPSDPTAPSD--PTGPSDPTAPSDPTAPSDPTVPSD 258
Query: 73 XXXXXXXXXXSRPSSPFCPFWP 8
S P++P P P
Sbjct: 259 PTGPSDPTAPSDPTAPSDPTGP 280
Score = 51.6 bits (118), Expect = 4e-07
Identities = 42/142 (29%), Positives = 48/142 (33%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPLIPIAPC 254
SDP PS P P P P P TA P +P P AP
Sbjct: 11 SDPTGPSDPTVPSDPTVPSDP--TAPSDPTVSSDPTAPSDPTGPS---DPTAPSDPTAPS 65
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGNXXXXXX 74
P +PS P +P P P P P GP P + PTGP P P +P P
Sbjct: 66 DPTVPSDPTAPSDPTAPSDPTGPTGPSDPTLSSD--PTGPSDPTGPTAPSDPTGPSDPTV 123
Query: 73 XXXXXXXXXXSRPSSPFCPFWP 8
+ PS P P P
Sbjct: 124 PSDPTGQSDPTAPSDPTAPSDP 145
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/55 (58%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +3
Query: 9 GQKGQKGELGREGIAG---QPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPG 161
G KG+ G+ GR G AG QPG DG QG G PGI GE+G KGD GP G G PG
Sbjct: 146 GDKGRPGKRGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDVGPRGLKGEPG 200
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPG 392
G +G GRPG +G G +G G G G+ G+ G PG KG++G V G KGEPG
Sbjct: 143 GPKGDKGRPGKRGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDVGPRGLKGEPG 200
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA-AVVYGQKGEPGPRGVPG 410
+ G PG QG G G+KG G GR G G PG G G+ G KGE GP+G G
Sbjct: 132 VQGPPGNQGPPGPKGDKGRPGKRGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDVG 191
Query: 411 IDGLPG 428
GL G
Sbjct: 192 PRGLKG 197
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
RG RG G PG GA G G +G G G G G+ G +G KGEP + + E PR
Sbjct: 154 RGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDVGPRGLKGEPGRIRNAPRAEISPR 213
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/95 (33%), Positives = 42/95 (44%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGE 227
+ G PGN G GP G G G++G +G GP G +
Sbjct: 132 VQGPPGNQGPPGPKGDKGRPGKRGRRGPAGPPG--------------------------Q 165
Query: 228 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPG 332
G DG+ G +G G+ GE+G +G G GL GEPG
Sbjct: 166 PGADGKQGIRGPPGIKGERGPKGDVGPRGLKGEPG 200
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G +G G +G G+PG G +GP G PG G G +G +GP G
Sbjct: 134 GPPGNQGPPGPKGDKGRPGKRGRRGPAGPPGQPGADGKQGIRGPPG 179
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 330 GYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGDR 488
G G++G P G KG PG RG G G PG +KG+R
Sbjct: 134 GPPGNQGPPGPK--GDKGRPGKRGRRGPAGPPGQPGADGKQGIRGPPGIKGER 184
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE--PAAVV--YGQKGEP 389
GE G G G G +G GE+G +G G G+ GE GY+G+ G+ P+ G KGEP
Sbjct: 1 GETGDQGATGITGEVGKEGEQGVKGARGGGGVKGEKGYRGELGKVGPSGPQGRKGFKGEP 60
Query: 390 GPRGVPGIDGLPG 428
GP G+PG G G
Sbjct: 61 GPPGLPGEQGPQG 73
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/100 (39%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERG 233
G+ G+ GA G TG G GE+G KG +G G G+ GE RGE G
Sbjct: 1 GETGDQGATGITGEVGKEGEQGVKGARG--GGGVKGEKGY---------------RGELG 43
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGE-PGYKGDKG 350
G G QG G GE G G PG G G+ G GD G
Sbjct: 44 KVGPSGPQGRKGFKGEPGPPGLPGEQGPQGKFGGLLGDGG 83
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G+KG +GELG+ G +G G G +G G PG+ GE+G +G G
Sbjct: 34 GEKGYRGELGKVGPSGPQGRKGFKGEPGPPGLPGEQGPQGKFG 76
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGE 164
G++G KG G G+ G+ G G G G G G KG KG+ GP GLPGE
Sbjct: 19 GEQGVKGARGGGGVKGEKGYRGELGKVGPSGPQGRKGFKGEPGPP--GLPGE 68
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
A G G KGE G G G+ G G QG GF G G G G+QGP G
Sbjct: 26 ARGGGGVKGEKGYRGELGKVGPSGPQGRKGFKGEPGPPGLPGEQGPQG 73
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/102 (35%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G GE+G+E G G +G G G+ GEKG +G+ G VG P
Sbjct: 7 GATGITGEVGKE------GEQGVKGARGGGGVKGEKGYRGELGKVGPSGP---------- 50
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIG-MSGEKGDRGFPGRS 311
+GE G G PG QG G G GD GF G S
Sbjct: 51 ----QGRKGFKGEPGPPGLPGEQGPQGKFGGLLGDGGFGGAS 88
Score = 35.5 bits (78), Expect = 0.031
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGN---DGAQGPTG-FPGITGEKGDKG 128
LG+ G G GR+G G+PG G QGP G F G+ G+ G G
Sbjct: 42 LGKVGPSGPQGRKGFKGEPGPPGLPGEQGPQGKFGGLLGDGGFGG 86
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 57.6 bits (133), Expect = 7e-09
Identities = 33/73 (45%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGP 395
RG G G PG +G G G++G RG PG G G PG G +G + + GQKGE G
Sbjct: 131 RGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGE 190
Query: 396 R--GVPGIDGLPG 428
R GV G G PG
Sbjct: 191 RGIGVRGEKGAPG 203
Score = 50.8 bits (116), Expect = 8e-07
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
GQ+G++G G G G PG DG +G G G+ G+KG+KG++G
Sbjct: 150 GQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGERG 192
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGE---------KGDKGDQGPVGYGLPG 161
G GQKG GR G G+ GN G+ GP G PG G KG KG++G G G+ G
Sbjct: 138 GHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGERGIGVRG 197
Query: 162 E 164
E
Sbjct: 198 E 198
Score = 48.0 bits (109), Expect = 5e-06
Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +3
Query: 60 PGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXXXXRGERGL 236
PG G G G PG G +G +G +G G G PG +G G
Sbjct: 128 PGPRGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGP------------------KGTPGK 169
Query: 237 DGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDK-GEPAAVV 368
DGR G G+ GM G+KG++G G G+ GE G GD P A+V
Sbjct: 170 DGRRGAVGSKGMKGQKGEKGERG-IGVRGEKGAPGDTLSAPNAIV 213
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +3
Query: 285 GDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G RG PGR G G+ G +G +G+ G G PGP+G PG DG G+
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQRGR--RGNPGSPGPKGTPGKDGRRGA 175
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%)
Frame = +3
Query: 300 PGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMK 479
PG G G PG+ G KG GQ+G G G PG G PG D K
Sbjct: 128 PGPRGPPGRPGHPGQKGTRGR--RGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQK 185
Query: 480 GDR 488
G++
Sbjct: 186 GEK 188
>SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29)
Length = 407
Score = 57.2 bits (132), Expect = 9e-09
Identities = 35/105 (33%), Positives = 49/105 (46%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXR 221
E +PG G GP G+ G +G++G QGPV G+ G+ +
Sbjct: 311 EASLDRPGEMGPDGPA---GLAGSQGEQGPQGPV--GMKGD------NGPQGGAGSRGTK 359
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
GE G G G +G +G +G+ G+ G G G G PG G KG+P
Sbjct: 360 GEAGPPGPNGPKGNVGPAGQVGNNGQDGTPGKDGVPGTNGGKGQP 404
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/71 (43%), Positives = 38/71 (53%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G RG+ G G QG G+ G G +G G G G PG G +G P + GQ+G PGP+G
Sbjct: 1 GPRGIKGASGLQGGPGLQGITGPQGETGSDGAQGAPGEGGLQG-PIG-LQGQRGPPGPKG 58
Query: 402 VPGIDGLPGSD 434
GI G G D
Sbjct: 59 SRGIAGEAGPD 69
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGD---RGFPGRSGLTGEPGYKGDKGEPAAV----VYGQ 377
+G GL G PG QG G GE G +G PG GL G G +G +G P + G+
Sbjct: 6 KGASGLQGGPGLQGITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGE 65
Query: 378 KGEPGPRGVPGIDGLPG 428
G GP G G+DG G
Sbjct: 66 AGPDGPAGPAGLDGKNG 82
Score = 54.4 bits (125), Expect = 6e-08
Identities = 34/76 (44%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGE---PGYKGDKGE--PAAVV--YGQK 380
G G G G QG +GM G+ G +G G G GE PG G KG PA V GQ
Sbjct: 327 GLAGSQGEQGPQGPVGMKGDNGPQGGAGSRGTKGEAGPPGPNGPKGNVGPAGQVGNNGQD 386
Query: 381 GEPGPRGVPGIDGLPG 428
G PG GVPG +G G
Sbjct: 387 GTPGKDGVPGTNGGKG 402
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXX 179
+L + G+ G G G+AG G G QGP G G G +G G +G G G PG
Sbjct: 313 SLDRPGEMGPDGPAGLAGSQGEQGPQGPVGMKGDNGPQGGAGSRGTKGEAGPPGPNGPKG 372
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRG 296
G G DG PG G G +G KG G
Sbjct: 373 NVGPAGQV------GNNGQDGTPGKDGVPGTNGGKGQPG 405
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
+GE+G G G +G G G G RG G +G G G KG+ G PA GQ G G
Sbjct: 332 QGEQGPQGPVGMKGDNGPQGGAGSRGTKGEAGPPGPNGPKGNVG-PA----GQVGNNGQD 386
Query: 399 GVPGIDGLPGSD 434
G PG DG+PG++
Sbjct: 387 GTPGKDGVPGTN 398
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP 158
G G +GE G +G G PG G QGP G G G G KG +G G P
Sbjct: 19 GITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGEAGP 68
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/74 (43%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G GL G G QG G G KGD G G +G G KG+ G P G KG GP G
Sbjct: 324 GPAGLAGSQGEQGPQGPVGMKGDNGPQGGAGSRGT---KGEAGPPGP--NGPKGNVGPAG 378
Query: 402 V---PGIDGLPGSD 434
G DG PG D
Sbjct: 379 QVGNNGQDGTPGKD 392
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G GE G +G G G G GP G GI GE G G GP G
Sbjct: 31 GAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGEAGPDGPAGPAG 76
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGP 140
G G G G G AGQ GN+G G G G+ G G KG GP
Sbjct: 363 GPPGPNGPKGNVGPAGQVGNNGQDGTPGKDGVPGTNGGKGQPGP 406
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/42 (45%), Positives = 20/42 (47%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQ 134
G G KG +G G G G DG G G PG G KG G Q
Sbjct: 366 GPNGPKGNVGPAGQVGNNGQDGTPGKDGVPGTNGGKGQPGPQ 407
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGD 122
GQ+G G G GIAG+ G DG GP G G G G+
Sbjct: 49 GQRGPPGPKGSRGIAGEAGPDGPAGPAGLDGKNGINGE 86
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
A G +G G G G G+ G+DGAQG G G+ G G +G +GP G
Sbjct: 8 ASGLQGGPGLQGITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPG 55
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 56.8 bits (131), Expect = 1e-08
Identities = 42/120 (35%), Positives = 49/120 (40%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G KG+ G G G G+ GA GPTG G TG KGD G GP G
Sbjct: 4 GPKGEIGATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATGPTG-------------- 49
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
+G G G G G +G KGD G G +G TG G KGD G ++
Sbjct: 50 ------------PKGDTGATGPAGPTGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPLI 97
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/66 (43%), Positives = 32/66 (48%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G G G G GA G +G KGD G G +G TG G KGD G A G G GP+G
Sbjct: 31 GPTGPTGPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTG--ATGPAGPTGPTGPKG 88
Query: 402 VPGIDG 419
G G
Sbjct: 89 DTGATG 94
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/101 (32%), Positives = 35/101 (34%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
A G G G G G G G GP G G TG G KGD G G P
Sbjct: 11 ATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATGPTGPKGDTGATGPAGP-------- 62
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPG 305
G +G G G G G +G KGD G G
Sbjct: 63 ---------TGPTGPKGDTGATGPAGPTGPTGPKGDTGATG 94
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/69 (46%), Positives = 37/69 (53%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G +G G PG QG G+ G G G GRS G PG G +G P G KG PG +G
Sbjct: 51 GPQGTKGPPGSQGLSGVQGYPGAPGPRGRSP-PGPPGIPGPRGLPG--YRGPKGPPGYQG 107
Query: 402 VPGIDGLPG 428
+PGI G PG
Sbjct: 108 MPGIAGAPG 116
Score = 52.4 bits (120), Expect = 3e-07
Identities = 37/106 (34%), Positives = 47/106 (44%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXX 194
+G +G G +G G PG+ G G G+PG G +G + GP G+PG
Sbjct: 44 RGTEGPPGPQGTKGPPGSQGLSGVQGYPGAPGPRG-RSPPGPP--GIPGP---------- 90
Query: 195 XXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPG 332
G RG G PG QG G++G G RG PG G G G
Sbjct: 91 -----RGLPGYRGPKGPPGYQGMPGIAGAPGPRGPPGPMGPPGPHG 131
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 222 GERGLDGRPG--GQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP 395
G +G G PG G+ G G G RG PG G G PGY+G G A G +G PGP
Sbjct: 66 GVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPGYQGMPGIAGAP--GPRGPPGP 123
Query: 396 RGVPGIDG 419
G PG G
Sbjct: 124 MGPPGPHG 131
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = +3
Query: 255 QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
+G G G +G +G PG GL+G GY G G G G PGPRG+PG G G
Sbjct: 44 RGTEGPPGPQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKG 101
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/47 (42%), Positives = 21/47 (44%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY 149
G G +G G G G PG GA GP G PG G G G V Y
Sbjct: 92 GLPGYRGPKGPPGYQGMPGIAGAPGPRGPPGPMGPPGPHGCASCVDY 138
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G +G G G G PG G G G PG G G G GP G
Sbjct: 86 GIPGPRGLPGYRGPKGPPGYQGMPGIAGAPGPRGPPGPMGPPGPHG 131
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 336 KGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
+G +G P G KG PG +G+ G+ G PG+
Sbjct: 44 RGTEGPPGP--QGTKGPPGSQGLSGVQGYPGA 73
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/56 (41%), Positives = 25/56 (44%)
Frame = -3
Query: 292 RSPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSP 125
RSP P P P P GLP R P P P G+P +P G P P GP P
Sbjct: 79 RSPPGP--PGIPGPRGLPGY-RGPKGP--PGYQGMPGIAGAPGPRGPPGPMGPPGP 129
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -3
Query: 259 PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
P PPG+P PR P + G P P G P P GP P+ P P
Sbjct: 82 PGPPGIPG-PRG--LPGYRGPKGPPGYQGMPGIAGAPGPRGPPGPMGPPGP 129
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/67 (46%), Positives = 34/67 (50%)
Frame = +3
Query: 228 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVP 407
+GL G PG G G SG G FPG G G PG G G P + G +G PG G P
Sbjct: 249 KGLQGPPGLNGQAGTSGAPG---FPGAPGFQGPPGLDGMPGAPG--MPGPQGYPGGSGAP 303
Query: 408 GIDGLPG 428
GI G PG
Sbjct: 304 GIPGSPG 310
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/70 (42%), Positives = 37/70 (52%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
+G GL+G+ G GA G G G +G PG G+ G PG G +G P G G PG
Sbjct: 252 QGPPGLNGQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYP-----GGSGAPGIP 306
Query: 399 GVPGIDGLPG 428
G PG+ G PG
Sbjct: 307 GSPGMPGPPG 316
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/63 (42%), Positives = 30/63 (47%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G+ G G PG GA G G G G PG G+ G GY G G P + G G PGP G
Sbjct: 259 GQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPG--IPGSPGMPGPPG 316
Query: 402 VPG 410
G
Sbjct: 317 PAG 319
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXXXX 218
+G+ G PG +G G +G PG G G QGP G G+PG
Sbjct: 249 KGLQGPPGLNGQAGTSGAPGFPGA---PGFQGPPGLDGMPG------------------A 287
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLT 320
G G G PGG GA G+ G G G PG +G T
Sbjct: 288 PGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAGPT 321
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGA---QGPTGFPGITGEKGDKGDQG-PVGYGLPG 161
G +G G G+ G +G PG GA QGP G G+ G G G QG P G G PG
Sbjct: 250 GLQGPPGLNGQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPG 304
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
A G +G G G G G PG G G +G PGI G G G GP G
Sbjct: 272 APGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAG 319
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/51 (43%), Positives = 24/51 (47%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVY 371
+G GLDG PG G G G G G PG G G PG G G P + Y
Sbjct: 276 QGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAG-PTPIRY 325
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLPG 161
G G G G G G PG DG G G PG G G G G P G+PG
Sbjct: 262 GTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPG 313
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 312 GLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
GL G PG G G A G G PG +G PG+DG+PG+
Sbjct: 250 GLQGPPGLNGQAGTSGAP--GFPGAPGFQGPPGLDGMPGA 287
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
A G G G G G+ G PG G GP G+PG +G G G G G
Sbjct: 266 APGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPG 313
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSP 125
+P P P PPGL P +P P PG P P SPG P P GP P
Sbjct: 266 APGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAGP 320
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGP 140
G G G G G+ G G G G G PG G G G GP
Sbjct: 277 GPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAGP 320
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -3
Query: 280 SPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSP 116
+P P AP G P P +P P G P G +P PG+P GP P P
Sbjct: 266 APGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAGP 320
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWS-PLSPFSPVIPGN 92
PPGL + + +P +P PG P PG P GP P +P IPG+
Sbjct: 254 PPGLNGQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGS 308
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGIT 107
A G G +G G G G PG+ G GP G G T
Sbjct: 287 APGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAGPT 321
>SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04)
Length = 60
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPG--RSGLTGEPGYKGDKG 350
GERG+DGRPG G G SG+KG++G G +G G PG KGD+G
Sbjct: 1 GERGIDGRPGQNGTAGFSGQKGEKGLEGITITGEKGNPGPKGDRG 45
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +3
Query: 276 GEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
GE+G G PG++G G G KG+KG + G+KG PGP+G GI G G+
Sbjct: 1 GERGIDGRPGQNGTAGFSGQKGEKGLEGITITGEKGNPGPKGDRGIQGPKGT 52
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPT--GFPGITGEKGDKGDQGPVG 146
G G+ G+ G G +GQ G G +G T G G G KGD+G QGP G
Sbjct: 4 GIDGRPGQNGTAGFSGQKGEKGLEGITITGEKGNPGPKGDRGIQGPKG 51
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G+ G DG G G G +G+KG+KG +G
Sbjct: 1 GERGIDGRPGQNGTAGFSGQKGEKGLEG 28
Score = 30.7 bits (66), Expect = 0.88
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEK--------GDKGDQGPVG 146
G GI G+PG +G GF G GEK G+KG+ GP G
Sbjct: 1 GERGIDGRPGQNGT---AGFSGQKGEKGLEGITITGEKGNPGPKG 42
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 55.2 bits (127), Expect = 4e-08
Identities = 33/127 (25%), Positives = 48/127 (37%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G+ G+ GE G G +G+ G G G +G G +GE G+ GD G
Sbjct: 686 GESGESGESGESGESGESGESGESGESGESGESGESGESGDSGESQDNADSSIQKRNGIP 745
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
++ L + G G SGE G+ G +G GE G G+
Sbjct: 746 QEKVSKKAEIGQKKQLSQKSDEPGESGESGESGESGESDETGELGESGKSGESSISKRSK 805
Query: 369 YGQKGEP 389
++ EP
Sbjct: 806 IPRENEP 812
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/139 (28%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGE--KGDKGDQGPVGYGLPGEXXXXXXXXX 191
G++ ++ G A + G+ G +G G GE +GD DQ L E
Sbjct: 575 GKEDDMDGSGSASESGDSDDSGNSGESG-EGEPDEGDGEDQTASNTSLDDEKSNTIIREQ 633
Query: 192 XXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVY 371
R G+ + I SGE G+ G G+SG +GE G G+ GE
Sbjct: 634 SGGSDESGERSASRESGKLKAESDIDGSGESGESGESGKSGESGESGESGESGESGE--S 691
Query: 372 GQKGEPGPRGVPGIDGLPG 428
G+ GE G G G G G
Sbjct: 692 GESGESGESGESGESGESG 710
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/95 (32%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = +3
Query: 72 GAQGPTGFPGITGEKGD-KGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRP 248
G +G + E G K + G G GE GE G G
Sbjct: 635 GGSDESGERSASRESGKLKAESDIDGSGESGESGESGKSGESGESGESGESGESGESGES 694
Query: 249 GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G G G SGE G+ G G SG +GE G GD GE
Sbjct: 695 GESGESGESGESGESGESGESGESGESGESGDSGE 729
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Frame = +3
Query: 39 REGIAGQPGN-DGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG-EXXXXXXXXXXXXXXX 209
REG +G+ G+ G+ + + DK D G V + P E
Sbjct: 833 REGASGESGSGSGSSVSSSITKRSLGPLDKTDSGKVAMFAQPAKETANEKAGMVKNSKAS 892
Query: 210 XXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
E G G G G G SGE G+ G G SG +GE G G+ G+ AA
Sbjct: 893 KEDSNESGESGESGKSGESGESGESGESGESGESGESGESGESGESGDSAA 943
Score = 44.8 bits (101), Expect = 5e-05
Identities = 35/116 (30%), Positives = 44/116 (37%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXX 191
Q G E G + + G A+ G +GE G+ G G G GE
Sbjct: 633 QSGGSDESGERSASRESGKLKAESDIDGSGESGESGESGKSGESGES--GESGESGES-- 688
Query: 192 XXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
GE G G G G G SGE G+ G G SG +GE G G+ + A
Sbjct: 689 ----------GESGESGESGESGESGESGESGESGESGESGESGESGDSGESQDNA 734
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGD 131
G+ G+ G+ G G +G+ G G G +G G +GE G+ GD
Sbjct: 900 GESGESGKSGESGESGESGESGESGESGESGESGESGESGD 940
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGY 335
GE G G G G G SGE G+ G + + GY
Sbjct: 915 GESGESGESGESGESGESGESGESGDSAAGEESQDNGY 952
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 55.2 bits (127), Expect = 4e-08
Identities = 41/117 (35%), Positives = 48/117 (41%), Gaps = 1/117 (0%)
Frame = +3
Query: 72 GAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPG 251
G GP G + KG G QGP GLPG+ +G +G G PG
Sbjct: 493 GPPGPPGLCNVDVCKGTPGIQGP--QGLPGKQGPAGP------------QGRQGASGPPG 538
Query: 252 GQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGPRGVPGIDG 419
G G G +G +GF G GL G PG G +G P G GP G PG G
Sbjct: 539 IPGLNGTVGPRGPQGFSGPRGLQGTPGQNGLQGPPGPQGPMGVNNSIGPPGPPGPQG 595
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXX 182
+G G G + G PG G QG G G G +G +G GP G GL G
Sbjct: 492 IGPPGPPGLCNVDVCKGTPGIQGPQGLPGKQGPAGPQGRQGASGPPGIPGLNGTVGPRGP 551
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSG 314
G+ GL G PG QG +G++ G G PG G
Sbjct: 552 QGFSGPRGLQGTPGQNGLQGPPGPQGPMGVNNSIGPPGPPGPQG 595
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/63 (41%), Positives = 32/63 (50%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G PG QG G+ G++G G GR G +G PG G G G +G GPRG+ G G
Sbjct: 508 GTPGIQGPQGLPGKQGPAGPQGRQGASGPPGIPGLNGTVGP--RGPQGFSGPRGLQGTPG 565
Query: 420 LPG 428
G
Sbjct: 566 QNG 568
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/69 (37%), Positives = 34/69 (49%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G++G G G QGA G G G G G G G G +G +G P G +G PGP+G
Sbjct: 520 GKQGPAGPQGRQGASGPPGIPGLNGTVGPRGPQGFSGPRGLQGTPGQ--NGLQGPPGPQG 577
Query: 402 VPGIDGLPG 428
G++ G
Sbjct: 578 PMGVNNSIG 586
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGE 164
G+KG +G GR G G PG GA G G G G KGDKG++G G GL G+
Sbjct: 35 GEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGDKGEKGDAGPRGLKGD 87
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/66 (40%), Positives = 35/66 (53%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G G G G +G G G +G RG PG+ G G+PG +G G G+KG+ GPRG
Sbjct: 26 GPAGPPGSKGEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGD--KGEKGDAGPRG 83
Query: 402 VPGIDG 419
+ G G
Sbjct: 84 LKGDPG 89
Score = 51.6 bits (118), Expect = 4e-07
Identities = 29/63 (46%), Positives = 33/63 (52%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G PG G G GEKG+RG GR G G PG G G+P G +G PGP+G G G
Sbjct: 23 GPPGPAGPPGSKGEKGNRGRRGRRGPRGPPGKPGADGKP-----GIRGPPGPKGDKGEKG 77
Query: 420 LPG 428
G
Sbjct: 78 DAG 80
Score = 51.6 bits (118), Expect = 4e-07
Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Frame = +3
Query: 9 GQKGQKGELGR------EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGE 164
G KG+KG GR G G+PG DG G G PG G+KG+KGD GP G G PG+
Sbjct: 32 GSKGEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGDKGEKGDAGPRGLKGDPGK 90
Score = 47.6 bits (108), Expect = 7e-06
Identities = 34/105 (32%), Positives = 49/105 (46%)
Frame = +3
Query: 66 NDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGR 245
++ +GP G G G KG+KG++G G P G+ G DG+
Sbjct: 18 HNNVRGPPGPAGPPGSKGEKGNRGRRGRRGP-----------------RGPPGKPGADGK 60
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQK 380
PG +G G G+KG++G G GL G+PG D P ++ QK
Sbjct: 61 PGIRGPPGPKGDKGEKGDAGPRGLKGDPGKIRD--APRVIIAPQK 103
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 392
+GE+G GR G +G G G+ G G PG G G G KG+KG+ A G KG+PG
Sbjct: 34 KGEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGDKGEKGD--AGPRGLKGDPG 89
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G G G +G G+ G G +GP G PG G+ G +G GP G
Sbjct: 26 GPAGPPGSKGEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKG 71
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 291 RGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXX 467
RG PG +G G G KG++G G G+PG G PGI G PG
Sbjct: 22 RGPPGPAGPPGSKGEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGDKGEKGDAGP 81
Query: 468 XXMKGD 485
+KGD
Sbjct: 82 RGLKGD 87
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G G G +G G G G +GP G PG G G G +GP G
Sbjct: 23 GPPGPAGPPGSKGEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPG 68
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 54.0 bits (124), Expect = 8e-08
Identities = 31/69 (44%), Positives = 34/69 (49%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G G G PG +G G+ G G G G G G PG KG G P G KG GP+G
Sbjct: 1034 GPPGPPGSPGDRGQTGVPGPVGPDGDIGAPGADGVPGPKGPPGPPG--YPGFKGYRGPQG 1091
Query: 402 VPGIDGLPG 428
PGI G PG
Sbjct: 1092 PPGIAGEPG 1100
Score = 51.2 bits (117), Expect = 6e-07
Identities = 40/114 (35%), Positives = 46/114 (40%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
G G G G G PG+ G +G TG PG G GD G P G+PG
Sbjct: 1025 GLMGRSGPVGPPGPPGSPGDRGQTGVPGPVGPDGDIG--APGADGVPGP----------- 1071
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+G G G PG +G G G G G PG G+ G GY G G A
Sbjct: 1072 -------KGPPGPPGYPGFKGYRGPQGPPGIAGEPGPPGIGGGIGYMGPPGPDA 1118
Score = 50.8 bits (116), Expect = 8e-07
Identities = 30/69 (43%), Positives = 33/69 (47%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G+RG G PG G G G G G PG G G PGY G KG G +G PG G
Sbjct: 1043 GDRGQTGVPGPVGPDGDIGAPGADGVPGPKGPPGPPGYPGFKG-----YRGPQGPPGIAG 1097
Query: 402 VPGIDGLPG 428
PG G+ G
Sbjct: 1098 EPGPPGIGG 1106
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGE 164
GQ G G +G +G G PG DG GP G PG G G KG +GP G G+ GE
Sbjct: 1046 GQTGVPGPVGPDGDIGAPGADGVPGPKGPPGPPGYPGFKGYRGPQGPPGIAGE 1098
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/70 (41%), Positives = 34/70 (48%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
RG+ G+ G G G IG G G G G G G PG+KG +G G GEPGP
Sbjct: 1045 RGQTGVPGPVGPDGDIGAPGADGVPGPKGPPGPPGYPGFKGYRGPQGPP--GIAGEPGPP 1102
Query: 399 GVPGIDGLPG 428
G+ G G G
Sbjct: 1103 GIGGGIGYMG 1112
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPG 161
A G G G G G G PG G +GP G PGI GE G G G +GY G PG
Sbjct: 1062 APGADGVPGPKGPPGPPGYPGFKGYRGPQGPPGIAGEPGPPGIGGGIGYMGPPG 1115
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3
Query: 294 GFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
G GRSG G PG G G+ GQ G PGP G G G PG+D
Sbjct: 1025 GLMGRSGPVGPPGPPGSPGDR-----GQTGVPGPVGPDGDIGAPGAD 1066
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGP 140
G G G G +G G G G G G PGI G G G GP
Sbjct: 1073 GPPGPPGYPGFKGYRGPQGPPGIAGEPGPPGIGGGIGYMGPPGP 1116
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 258 GAIGMSGEKGDRGFPGRSGLTGEPG--YKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G G G +GDRG PG +G G G G G P V G G PGP G GI GLPG+
Sbjct: 465 GGRGPQGVRGDRGPPGPAGPPGPSGRYVPGPPGPPGRTVIGLPGPPGPAGPRGIPGLPGA 524
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTG--FPGITGEKGD-----KGDQGPVG-YGLPG 161
G +G G G G PG G GP+G PG G G G GP G G+PG
Sbjct: 465 GGRGPQGVRGDRGPPGPAGPPGPSGRYVPGPPGPPGRTVIGLPGPPGPAGPRGIPG 520
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITG 110
G G GR + G PG G GP G PG+ G
Sbjct: 494 GPPGPPGRT-VIGLPGPPGPAGPRGIPGLPG 523
>SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10)
Length = 106
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
G+ G KG++GFPG GL G PG KG G P G++G PG RG G G G D
Sbjct: 10 GIMGLKGNQGFPGPMGLDGIPGLKGFPGTPGD--QGRQGVPGKRGDDGAKGREGED 63
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G GL G G G +G+ G G +GFPG G G G G +G+ A G++GE G G
Sbjct: 10 GIMGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGDDGA--KGREGEDGANG 67
Query: 402 VPGIDG 419
PG G
Sbjct: 68 PPGSPG 73
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = +3
Query: 237 DGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGID 416
+G G +G G G G G PG G G PG +G +G P G G G G G +
Sbjct: 9 NGIMGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGK--RGDDGAKGREGEDGAN 66
Query: 417 GLPGS 431
G PGS
Sbjct: 67 GPPGS 71
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXR 221
GI G GN G GP G GI G KG G G G G+PG+
Sbjct: 10 GIMGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGK---------RGDDGAKGRE 60
Query: 222 GERGLDGRPGGQGAIGMS 275
GE G +G PG G+ M+
Sbjct: 61 GEDGANGPPGSPGSANMN 78
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQ---PGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
G +G G +G +GI G PG G QG G PG G+ G KG +G G G PG
Sbjct: 16 GNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGDDGAKGREGEDGANGPPG 70
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
G G G+ GR+G+ G+ G+DGA+G G G G G G
Sbjct: 34 GFPGTPGDQGRQGVPGKRGDDGAKGREGEDGANGPPGSPG 73
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/114 (31%), Positives = 41/114 (35%), Gaps = 2/114 (1%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRS-PFSPLIPIAP 257
SDP PS P P P P P + S P P +P P
Sbjct: 393 SDPTVPSDPTVPSDPTVPSDPTVPSDPTDPTVPSDPTVPSDPTDPTVPSDPTDPTVPSDP 452
Query: 256 CPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIP 98
P +PS P P P P P +P GP P P P PT P P P P +P
Sbjct: 453 TDPTVPSDPTVPAGPTVPSGPAVPTGPTVPSGPTVPSGPTVPSGPTVPSGPTVP 506
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/103 (32%), Positives = 36/103 (34%)
Frame = -3
Query: 433 SDPGRPSIPGTPRGPGSPF*P*TTAAXXXXXXXXXXXXXXXXXXXXPRSPFSPLIPIAPC 254
SDP PS P P P P P T P P P P P
Sbjct: 426 SDPTVPSDPTDPTVPSDPTDP--TVPSDPTDPTVPSDPTVPAGPTVPSGPAVPTGPTVPS 483
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSP 125
P +PS P P P P P +P GP P P P+GP P
Sbjct: 484 GPTVPSGPTVPSGPTVPSGPTVPSGPTVPSGP--TVPSGPTVP 524
>SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 51.6 bits (118), Expect = 4e-07
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Frame = +3
Query: 81 GPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQG 260
G G PG G KGDKGD V + +G G PG +G
Sbjct: 77 GLKGDPGPVGPKGDKGD--TVSARTISATLRDNFALGTVRDNFFILKVTQGSQGPPGKRG 134
Query: 261 AIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKG--EPGPR 398
GEKGD+G PG G G G KGD G P ++G +P PR
Sbjct: 135 P---PGEKGDQGIPGVKGDVGPKGEKGDSGGPEVRTRSRQGNDKPPPR 179
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
K +G G G G PG G QG G G G KG+KGD G
Sbjct: 121 KVTQGSQGPPGKRGPPGEKGDQGIPGVKGDVGPKGEKGDSG 161
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G G+ G G +G G PG+ G+ G KG++G G
Sbjct: 125 GSQGPPGKRGPPGEKGDQGIPGVKGDVGPKGEKGDSG 161
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +3
Query: 282 KGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLP 425
K +G G G G PG KGD+G P G KG+ GP+G G G P
Sbjct: 121 KVTQGSQGPPGKRGPPGEKGDQGIP-----GVKGDVGPKGEKGDSGGP 163
Score = 33.9 bits (74), Expect = 0.095
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G PG G G G GI G KGD G +G G
Sbjct: 124 QGSQGPPGKRGPPGEKGDQGIPGVKGDVGPKGEKG 158
>SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 111
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/67 (41%), Positives = 32/67 (47%)
Frame = +3
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGI 413
L G PG G G+ G +G RG GR G G G G G P + G KGE G G G
Sbjct: 43 LKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRI--GIKGEKGKTGRKGD 100
Query: 414 DGLPGSD 434
G+ G D
Sbjct: 101 SGMKGDD 107
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G G+ GR G +G G G +G +G PG G+ G G KG+KG+ G+KG+ G +G
Sbjct: 51 GPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKT-----GRKGDSGMKG 105
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
RG RG+ GR G + G+ G G G PGR G+ GE G G KG+
Sbjct: 59 RGPRGIQGRKGNR---GVQGIPGSHGIPGRIGIKGEKGKTGRKGD 100
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G +G G G+ G PG+ G G G G G+ G KGD G G
Sbjct: 60 GPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTGRKGDSGMKG 105
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G++G +G GR+G G G G+ G G GI GEKG G +G G
Sbjct: 56 MGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTGRKGDSG 102
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQG---PTGFPGITGEKGDKGDQGPVG-YGLPGE 164
G G G G GI G+ GN G QG G PG G KG+KG G G G+ G+
Sbjct: 51 GPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTGRKGDSGMKGD 106
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 24 KGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG-PVGYGLPG 161
K L +G G PG G G G GI G KG++G QG P +G+PG
Sbjct: 38 KDRLILKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPG 84
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGD 344
+G RG+ G PG G G G KG++G GR G+ G KGD
Sbjct: 68 KGNRGVQGIPGSHGIPGRIGIKGEKGKTGRK---GDSGMKGD 106
Score = 35.9 bits (79), Expect = 0.023
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFP---GITGEKGDKGDQGPVG 146
G G G +GR G G G G +G G P GI G G KG++G G
Sbjct: 48 GPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTG 96
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGND 71
+G KG+KG+ GR+G +G G+D
Sbjct: 86 IGIKGEKGKTGRKGDSGMKGDD 107
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G G +G+ G PG G QGP G G G KG +G QGP+G
Sbjct: 464 GPRGPQGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIG 506
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G++G KG+ G +G G G+ G QGP G G G G G +GP G
Sbjct: 470 GEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPKG 515
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G G +G+ G +G G+ G G+QGP G G G +G KG+ G
Sbjct: 476 GDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPKGESG 518
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGM---SGEKGDRGFPGRSGLTGEPGYKGDKGE 353
+GE+GL G PG QG G GE+G +G G G G G +G KGE
Sbjct: 469 QGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPKGE 516
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G G +G++G G G G+ G KGD+GE G KG GP+G G G G
Sbjct: 464 GPRGPQGEQGLKGDPGPQGQQGPKGDQGE-----QGPKGSQGPQGPIGALGPRG 512
Score = 34.3 bits (75), Expect = 0.072
Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 9/150 (6%)
Frame = +3
Query: 9 GQKGQKGE--LGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXX 182
G+ G+ GE +G +G G G+DG G G ++ K +Q + L
Sbjct: 360 GKDGKDGESIVGPQGPPGYNGSDGKDGKDGIQIYLAKEEFKTEQAALATQLTTATNQLTS 419
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKG------DRGFPGRSGLTGEPGYKGD 344
L +GA+ ++ + PG G GE G KGD
Sbjct: 420 SVATLDSKVDSTSSR--LQDMIMVRGAVVSVLDRNPYMAVNNSRIPGPRGPQGEQGLKGD 477
Query: 345 KG-EPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G + G +GE GP+G G G G+
Sbjct: 478 PGPQGQQGPKGDQGEQGPKGSQGPQGPIGA 507
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
G KG +GE G +G G G GA GP G G +G +G
Sbjct: 485 GPKGDQGEQGPKGSQGPQGPIGALGPRGPKGESGISALRG 524
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 321 GEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G PG G G+ + G +G PG G G DG G
Sbjct: 354 GAPGKDGKDGKDGESIVGPQGPPGYNGSDGKDGKDG 389
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQ--GPTGFPGITGEKGDKGDQG 137
G G G+ G DG GP G PG G G G G
Sbjct: 354 GAPGKDGKDGKDGESIVGPQGPPGYNGSDGKDGKDG 389
>SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 50.8 bits (116), Expect = 8e-07
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGE 386
RG G +G G +G G G KGD+G G +G G PG KGDKG+ A G KGE
Sbjct: 686 RGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGA--SGAKGE 739
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G KG G G+ G G+ GA G G PG+ G+KGD G G G
Sbjct: 693 GPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKG 738
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/59 (42%), Positives = 30/59 (50%)
Frame = +3
Query: 255 QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
+G G G G G G GL G+PG KGDKG+ A G G PG +G G G G+
Sbjct: 680 EGPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGA--NGTAGAPGVKGDKGDTGASGA 736
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGE 164
G G +G +G +G+ G PG G +G TG G G G KGD+G G G GE
Sbjct: 687 GFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGE 739
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
G +G G G++G GP G G G KGDKGD G G G PG
Sbjct: 681 GPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPG 723
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 24 KGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGE 164
+G G G G G G +G G PG+ G+KGD G G G G+ G+
Sbjct: 680 EGPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGD 727
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 372 GQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGDR 488
G +G GP+G+ G GL G +KGD+
Sbjct: 690 GSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDK 728
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 255 QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP---RGVPGIDGLP 425
QG G +G GD G PG+ G G+ G G G+P A G KG PGP RG G+ G P
Sbjct: 31 QGHDGKNGIPGDPGVPGQLGTPGKSGNDGRNGKPGAP--GPKGPPGPKGSRGPKGVQGPP 88
Query: 426 GS 431
G+
Sbjct: 89 GT 90
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G GQ G G+ G G+ G GA GP G PG G +G KG QGP G
Sbjct: 44 GVPGQLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
G G G G+ G G+ GNDG G G PG G G KG +GP G G PG
Sbjct: 38 GIPGDPGVPGQLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/67 (41%), Positives = 32/67 (47%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
+G G +G PG G G G G G GR+G G P G KG P G KG GP+
Sbjct: 31 QGHDGKNGIPGDPGVPGQLGTPGKSGNDGRNGKPGAP---GPKGPP-----GPKGSRGPK 82
Query: 399 GVPGIDG 419
GV G G
Sbjct: 83 GVQGPPG 89
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G+ G G G PG G G +G G G+ G G +GP G
Sbjct: 31 QGHDGKNGIPGDPGVPGQLGTPGKSGNDGRNGKPGAPGPKGPPG 74
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/69 (42%), Positives = 32/69 (46%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G RG G G QG G G KG +GF G G G G +G +G P G G GP G
Sbjct: 212 GSRGPPGPSGPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQGPPGP--KGDTGPAGPGG 269
Query: 402 VPGIDGLPG 428
G G PG
Sbjct: 270 PRGNQGPPG 278
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV--VYGQKGEPGP 395
G +G G PG +G G G +G G G+ G G PG KGD G PA G +G PGP
Sbjct: 221 GPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQGPPGPKGDTG-PAGPGGPRGNQGPPGP 279
Query: 396 RG 401
G
Sbjct: 280 SG 281
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G +G G G GQ G G +GP GF G G G G QGP G
Sbjct: 209 GYNGSRGPPGPSGPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQG 254
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G G G G AGQ G G GP G G G G +G+QGP G
Sbjct: 233 GPQGFMGPRGHNGTAGQQGPQGPPGPKGDTGPAGPGGPRGNQGPPG 278
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXX 194
G G G G G PG G QG G P G KG +G GP G+ G G+
Sbjct: 203 GSTGPRGYNGSRGPPGPSGPQGQQGPP---GTKGPQGFMGPRGHNGTAGQ---------- 249
Query: 195 XXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGE 326
+G +G G G G G G +G++G PG SG TG+
Sbjct: 250 --------QGPQGPPGPKGDTGPAGPGGPRGNQGPPGPSG-TGD 284
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYG 152
+G +G G G++G G PG G GP G PG G +G++G GP G G
Sbjct: 238 MGPRGHNGTAGQQGPQGPPGPKGDTGPAG-PG--GPRGNQGPPGPSGTG 283
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP 158
G +GQ+G G +G G G G G G G G G KGD GP G G P
Sbjct: 221 GPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQGPPGPKGDTGPAGPGGP 270
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G G G +G G PG G QG G G G G +G QGP G
Sbjct: 212 GSRGPPGPSGPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQGPPG 257
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G G G++G G G G GP G G G++G +G GP G
Sbjct: 215 GPPGPSGPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQGPPGPKG 260
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = +3
Query: 273 SGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
SG G RG+ G G G G +G +G P G +G GPRG G G G
Sbjct: 202 SGSTGPRGYNGSRGPPGPSGPQGQQGPPG--TKGPQGFMGPRGHNGTAGQQG 251
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGIT 107
G G KG+ G G G GN G GP+G +T
Sbjct: 254 GPPGPKGDTGPAGPGGPRGNQGPPGPSGTGDLT 286
>SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 303
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPF 113
+P P P PC P P KP P +P P P IPC P P+ P P P P+ P P
Sbjct: 130 TPDKPHKPDIPCTPDKPHKPDIPCTPDKPHKPDIPCTPDKPYKPDIPCTPDKPYKPDIPC 189
Query: 112 SPVIP 98
+P P
Sbjct: 190 TPDEP 194
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPF 113
+P P P PC P P KP P +P P P IPC P P+ P P P P P P
Sbjct: 58 TPDEPYKPDRPCTPDEPHKPDIPCTPDEPHKPDIPCTPDEPYKPDIPCTPDKPHKPDKPC 117
Query: 112 SPVIP 98
+P P
Sbjct: 118 TPDKP 122
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPF 113
+P P P PC P P KP P +P P P IPC P P+ P P P P P P
Sbjct: 22 TPDEPPKPGIPCTPDKPHKPDIPCTPDEPHKPDIPCTPDEPYKPDRPCTPDEPHKPDIPC 81
Query: 112 SPVIP 98
+P P
Sbjct: 82 TPDEP 86
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPF 113
+P P P PC P P KP P +P P P IPC P P P P P P P P
Sbjct: 94 TPDEPYKPDIPCTPDKPHKPDKPCTPDKPPKPDIPCTPDKPHKPDIPCTPDKPHKPDIPC 153
Query: 112 SPVIP 98
+P P
Sbjct: 154 TPDKP 158
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPF 113
+P P P PC P P KP P +P P P IPC P P P P P P+ P P
Sbjct: 118 TPDKPPKPDIPCTPDKPHKPDIPCTPDKPHKPDIPCTPDKPHKPDIPCTPDKPYKPDIPC 177
Query: 112 SPVIP 98
+P P
Sbjct: 178 TPDKP 182
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPF 113
+P P P PC P P KP P +P P P IPC P P P P P P+ P P
Sbjct: 46 TPDEPHKPDIPCTPDEPYKPDRPCTPDEPHKPDIPCTPDEPHKPDIPCTPDEPYKPDIPC 105
Query: 112 SPVIP 98
+P P
Sbjct: 106 TPDKP 110
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -3
Query: 277 PLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP----*PTGPWSPLSPFS 110
P P PC P P KP P +P P P IPC P P+ P P P P P +P
Sbjct: 206 PPKPDIPCTPDKPYKPDRPCTPDEPSKPDIPCTPDKPYKPDRPCTQDKPHKPDIPCTPDK 265
Query: 109 PVIPG 95
P PG
Sbjct: 266 PDKPG 270
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPF 113
+P P P PC P P KP P + P P IPC P P+ P P P P P P
Sbjct: 178 TPDKPYKPDIPCTPDEPPKPDIPCTQDKPPKPDIPCTPDKPYKPDRPCTPDEPSKPDIPC 237
Query: 112 SPVIP 98
+P P
Sbjct: 238 TPDKP 242
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/64 (39%), Positives = 29/64 (45%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFS 110
+P P P PC P P KP P +P P P IPC P P+ P P +P P
Sbjct: 142 TPDKPHKPDIPCTPDKPHKPDIPCTPDKPYKPDIPCTPDKPYKPDI-----PCTPDEPPK 196
Query: 109 PVIP 98
P IP
Sbjct: 197 PDIP 200
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPF 113
+P P P PC P P KP P +P P P IPC P P P P P+ P P
Sbjct: 166 TPDKPYKPDIPCTPDKPYKPDIPCTPDEPPKPDIPCTQDKPPKPDIPCTPDKPYKPDRPC 225
Query: 112 SPVIP 98
+P P
Sbjct: 226 TPDEP 230
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/64 (39%), Positives = 28/64 (43%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFS 110
+P P P PC P P KP P +P P P PC P P P P P +P P
Sbjct: 82 TPDEPHKPDIPCTPDEPYKPDIPCTPDKPHKPDKPCTPDKP-----PKPDIPCTPDKPHK 136
Query: 109 PVIP 98
P IP
Sbjct: 137 PDIP 140
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPG 155
+P P P PC P P KP P + P P IPC P P PG
Sbjct: 226 TPDEPSKPDIPCTPDKPYKPDRPCTQDKPHKPDIPCTPDKPDKPG 270
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP 149
+P P P PC P PSKP P +P P P PC P P P
Sbjct: 214 TPDKPYKPDRPCTPDEPSKPDIPCTPDKPYKPDRPCTQDKPHKPDIP 260
Score = 35.5 bits (78), Expect = 0.031
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 235 KPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFSPVIP 98
KP P +P P PGIPC P P P P P P P P +P P
Sbjct: 16 KPNIPSTPDEPPKPGIPCTPDKPHKPDIPCTPDEPHKPDIPCTPDEP 62
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGI 188
+P P P PC P KP P +P P PGI
Sbjct: 238 TPDKPYKPDRPCTQDKPHKPDIPCTPDKPDKPGI 271
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/64 (42%), Positives = 33/64 (51%)
Frame = +3
Query: 228 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVP 407
+G DG+ G G G+ G+ G G G G G+PG G KG P G KG GP+GV
Sbjct: 31 QGHDGKNGIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKGPP-----GPKGSRGPKGVQ 85
Query: 408 GIDG 419
G G
Sbjct: 86 GPPG 89
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G+ G G+ G G+ G GA GP G PG G +G KG QGP G
Sbjct: 44 GVPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
G G G G+ G G+ GNDG G G PG G G KG +GP G G PG
Sbjct: 38 GIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +3
Query: 261 AIGMSGEKGDRGFPGRSGLTGEPGYKGD---KGEPAAVVYGQKGEPGP---RGVPGIDGL 422
A G G+ G G PG G G PG G+ G+P A G KG PGP RG G+ G
Sbjct: 30 AQGHDGKNGIPGIPGVPGKPGTPGKSGNDGRNGKPGAP--GPKGPPGPKGSRGPKGVQGP 87
Query: 423 PGS 431
PG+
Sbjct: 88 PGT 90
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/57 (42%), Positives = 27/57 (47%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 392
G G+ G PG G G SG G G PG G G PG KG +G G +G PG
Sbjct: 38 GIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPK-----GVQGPPG 89
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/64 (42%), Positives = 33/64 (51%)
Frame = +3
Query: 228 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVP 407
+G DG+ G G G+ G+ G G G G G+PG G KG P G KG GP+GV
Sbjct: 31 QGHDGKNGIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKGPP-----GPKGSRGPKGVQ 85
Query: 408 GIDG 419
G G
Sbjct: 86 GPPG 89
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G+ G G+ G G+ G GA GP G PG G +G KG QGP G
Sbjct: 44 GVHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
G G G G+ G G+ GNDG G G PG G G KG +GP G G PG
Sbjct: 38 GIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +3
Query: 261 AIGMSGEKGDRGFPGRSGLTGEPGYKGD---KGEPAAVVYGQKGEPGP---RGVPGIDGL 422
A G G+ G G PG G G PG G+ G+P A G KG PGP RG G+ G
Sbjct: 30 AQGHDGKNGIPGIPGVHGKPGTPGKSGNDGRNGKPGAP--GPKGPPGPKGSRGPKGVQGP 87
Query: 423 PGS 431
PG+
Sbjct: 88 PGT 90
>SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07)
Length = 198
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
LG +G +G G +G G G+ G QG G G GEKGDKGDQG G
Sbjct: 97 LGLQGAQGARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKG 143
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGV 404
G G QGA G+ G+KGD+G G GL G+ G KG+KG+ G +G G +GV
Sbjct: 98 GLQGAQGARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDK-----GDQGLKGNQGV 147
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
GL G G +G G G+KGD+G G G G+ G KGDKG+
Sbjct: 98 GLQGAQGARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGD 138
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA 359
+G RGL G G +G G+ G KGD+G G G G+ G KG++G A
Sbjct: 103 QGARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQGVSA 149
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
A G KG KG+ G +GI G G+ G +G G G G KG++G
Sbjct: 105 ARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQG 146
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQ 377
RG +G G G QG G+ G+KGD+G G G G G +G ++ G+
Sbjct: 106 RGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQGVSATATPIITGK 158
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G +G G +G G G G +G G G G+KGD+G +G G
Sbjct: 101 GAQGARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQG 146
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
+G +G GR G +G G G++G +G G G KGD+GE G +G PGP+
Sbjct: 211 QGPKGDRGRRGPRGRQGPQGKRGPKGHTVYRRTQGAVGQKGDRGE-----RGPQGPPGPK 265
Query: 399 GVPGIDGLPG 428
G G G PG
Sbjct: 266 GPIGPKGEPG 275
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFP------GITGEKGDKGDQGPVG 146
+G KG+ GR G G+ G G +GP G G G+KGD+G++GP G
Sbjct: 211 QGPKGDRGRRGPRGRQGPQGKRGPKGHTVYRRTQGAVGQKGDRGERGPQG 260
Score = 41.1 bits (92), Expect = 6e-04
Identities = 32/102 (31%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
Frame = +3
Query: 102 ITGEKGDKGDQGPVG----YGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIG 269
I G KGD+G +GP G G G RGERG G PG +G IG
Sbjct: 210 IQGPKGDRGRRGPRGRQGPQGKRGPKGHTVYRRTQGAVGQKGDRGERGPQGPPGPKGPIG 269
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP 395
GE G TG P + + A + G P P
Sbjct: 270 PKGEPGP-PLTKPKITTGSPKSRANVSTKAWLPCVASGNPHP 310
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 9 GQKGQKGEL---GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGP 140
G++G KG +G GQ G+ G +GP G PG G G KG+ GP
Sbjct: 230 GKRGPKGHTVYRRTQGAVGQKGDRGERGPQGPPGPKGPIGPKGEPGP 276
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDG------AQGPTGFPGITGEKGDKGDQGPVG-YGLPGE 164
G +G++G GR+G G+ G G QG G G GE+G +G GP G G GE
Sbjct: 215 GDRGRRGPRGRQGPQGKRGPKGHTVYRRTQGAVGQKGDRGERGPQGPPGPKGPIGPKGE 273
Score = 33.9 bits (74), Expect = 0.095
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPG 101
A+GQKG +GE G + G PG G GP G PG
Sbjct: 246 AVGQKGDRGERGPQ---GPPGPKGPIGPKGEPG 275
>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
Length = 88
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 90 GFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIG 269
G+PGI G G KGD+GP+G RG +G G PG +G G
Sbjct: 1 GYPGIEGPPGPKGDRGPIG-----------------------PRGPQGYQGAPGPKGTGG 37
Query: 270 MSGEKGDRGFPGRSGLTGEP-GYKGDKGEPA 359
GEKGD G G G G+ ++ +G+ A
Sbjct: 38 FPGEKGDEGPRGEDGSAGDDLAFRDPRGKTA 68
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/60 (43%), Positives = 31/60 (51%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G PG +G G G++G G G G G PG KG G P G+KG+ GPRG G G
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGFP-----GEKGDEGPRGEDGSAG 55
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G KG+ G G G G GA GP G G GEKGD+G +G G
Sbjct: 7 GPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGEDG 52
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/62 (40%), Positives = 30/62 (48%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
+G+RG G G QG G G KG GFPG G G G G G+ A +G+ R
Sbjct: 12 KGDRGPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGEDGSAGDDLA-FRDPRGKTALR 70
Query: 399 GV 404
GV
Sbjct: 71 GV 72
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 303 GRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGPRGVPGIDGLPGSD 434
G G+ G PG KGD+G G +G PGP+G G G G +
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGFPGEKGDE 45
Score = 34.7 bits (76), Expect = 0.054
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGE 164
G GI G PG G +GP G G G +G G +G G+ PGE
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGF--PGE 41
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGE 113
G +G +G G +G G PG G +GP G G G+
Sbjct: 22 GPQGYQGAPGPKGTGGFPGEKGDEGPRGEDGSAGD 56
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSG-LTGEPGYKGDKGEPAAVVYGQKGEPGP 395
RG G G G +G G+ GEKGDRG PG G + + GD G+ +VY ++ G
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGVGGSVIAQKSDTGDDGK-EPIVYPKEERTGS 179
Query: 396 RGVPGIDGLPGS 431
PGI P S
Sbjct: 180 INAPGIRVEPSS 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+ G PG G QGP G PG+ GEKGD+G G G
Sbjct: 120 LRGPPGPPGPQGPKGDPGVRGEKGDRGIPGVGG 152
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITG----EKGDKGDQG--PVGY 149
+G G G +G G PG G +G G PG+ G +K D GD G P+ Y
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGVGGSVIAQKSDTGDDGKEPIVY 171
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G++ + G G +G G SG++G +G PG G G G KGD+G+P G+ G PR
Sbjct: 168 GKKCVQGPQGLRGPRGYSGDRGPQGIPGDMGPRGAKGDKGDRGKP-----GETGSAPPRM 222
Query: 402 VP 407
P
Sbjct: 223 KP 224
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGE 164
+G+K G +G+ G G G +GP G PG G +G KGD+G G PGE
Sbjct: 167 EGKKCVQGPQGLRGPRGYSGDRGPQGIPGDMGPRGAKGDKG--DRGKPGE 214
Score = 33.9 bits (74), Expect = 0.095
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 273 SGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-----VYGQKGEPGPRGVPGIDG 419
S +G + G GL G GY GD+G P + G KG+ G RG PG G
Sbjct: 164 STPEGKKCVQGPQGLRGPRGYSGDRG-PQGIPGDMGPRGAKGDKGDRGKPGETG 216
>SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022)
Length = 94
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYG 152
+G G G G G G+ G QGP G G G +G KGDQG G G
Sbjct: 37 EGPMGPRGYNGSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGVKGVG 82
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G G +G G +G G G G GP G+ G G KGD+G +G
Sbjct: 38 GPMGPRGYNGSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGVKG 80
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
++G G +G G G KGD+G G G G G +G KG+
Sbjct: 36 MEGPMGPRGYNGSQGPKGDQGVQGPIGPQGYNGTQGPKGD 75
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGE 164
+G G G G G G+ G QGP G G G +G KGDQG G+ G GE
Sbjct: 821 EGPMGPRGFNGSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGIQGFNGTKGE 871
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G +G KG+ G +G G G +G QGP G GI G G KG+ G
Sbjct: 831 GSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGIQGFNGTKGESG 873
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G G +G G +G G G G GP G+ G G KGD+G QG
Sbjct: 822 GPMGPRGFNGSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGIQG 864
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVY-GQKGEPG 392
++G G +G G G KGD+G G G G G +G KG+ + G KGE G
Sbjct: 820 MEGPMGPRGFNGSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGIQGFNGTKGESG 873
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGE 164
G++G+ G G G G G G QGP G G G +G +G QGP G GL G+
Sbjct: 117 GKRGEPGPQGPPGPQGPTGAKGDQGPEGIQGPQGIRGPEGPQGPQGPQGLEGK 169
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
G KG +G G G+ G+ G G QGP G PG G KG+ G
Sbjct: 380 GSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGESG 419
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 GNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPG 161
G+ G QGP G G+ GEKG +GDQGP G G PG
Sbjct: 380 GSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPG 413
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = +3
Query: 228 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
RG G G G G+ GEKG +G G G G PG KG+ G P
Sbjct: 379 RGSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGESGGP 421
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 228 RGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
R + G G QG G G +G++G G G GEPG G KGE
Sbjct: 376 REIRGSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGE 417
Score = 36.7 bits (81), Expect = 0.013
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPR 398
RG+RG G G G G +G KGD+ G G+ G G +G + G +G GP+
Sbjct: 116 RGKRGEPGPQGPPGPQGPTGAKGDQ---GPEGIQGPQGIRGPE--------GPQGPQGPQ 164
Query: 399 GVPGIDGL 422
G+ G G+
Sbjct: 165 GLEGKAGV 172
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +3
Query: 276 GEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLP 425
G KG +G G GL GE G +GD+G KGEPG G G G P
Sbjct: 380 GSKGPQGPNGTRGLQGEKGPQGDQGP--------KGEPGTPGAKGESGGP 421
Score = 35.9 bits (79), Expect = 0.023
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
K ++G+ G G G PG G G G G G +G +G +GP G
Sbjct: 113 KSRRGKRGEPGPQGPPGPQGPTGAKGDQGPEGIQGPQGIRGPEG 156
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
G G KG+ G EGI G G G +GP G G G +G G
Sbjct: 132 GPTGAKGDQGPEGIQGPQGIRGPEGPQGPQGPQGLEGKAG 171
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 255 QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEP 389
+G+ G G G RG G G G+ G KG+ G P A G+ G P
Sbjct: 379 RGSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGA--KGESGGP 421
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 306 RSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
R G GEPG +G G G KG+ GP G+ G G+ G +
Sbjct: 115 RRGKRGEPGPQGPPGPQGPT--GAKGDQGPEGIQGPQGIRGPE 155
Score = 34.7 bits (76), Expect = 0.054
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFP 98
G +G+KG G +G G+PG GA+G +G P
Sbjct: 392 GLQGEKGPQGDQGPKGEPGTPGAKGESGGP 421
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITG 110
A G +G +G G +GI G G G QGP G G G
Sbjct: 136 AKGDQGPEGIQGPQGIRGPEGPQGPQGPQGLEGKAG 171
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGY 335
G RGL G G QG G KG+ G PG G +G P +
Sbjct: 389 GTRGLQGEKGPQGD---QGPKGEPGTPGAKGESGGPPF 423
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLP 425
P G+ + + RG G G G G +G+KG +G+ GP+G PG G
Sbjct: 364 PPGRAPPDLKVTREIRGSKGPQGPNGTRGLQGEKGP--------QGDQGPKGEPGTPGAK 415
Query: 426 G 428
G
Sbjct: 416 G 416
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFP 302
+GE+G G G +G G G KG+ G P
Sbjct: 394 QGEKGPQGDQGPKGEPGTPGAKGESGGP 421
>SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09)
Length = 386
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSG---LTGEPGYKGDKGEPAAVVYGQKGEPGPRGV 404
++G G +G G G KGD+G G G G G KGD+G V G +G PGP+G
Sbjct: 292 MEGPIGPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQG--VKGDQGVPGPQGP 349
Query: 405 PGIDGL 422
G G+
Sbjct: 350 KGAQGV 355
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G KG+ G +G G +G QG G G+ G KGD+G GP G
Sbjct: 303 GSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPGPQG 348
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
G G +G G +G G G G GP + G G KGD+G QG G G+PG
Sbjct: 294 GPIGPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPG 345
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKG-EPAAVVYGQKGEPGPRGVPGIDGLPG 428
M G G RG+ G G G+ G +G G + G KG+ G +GV G G+PG
Sbjct: 292 MEGPIGPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPG 345
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/88 (31%), Positives = 37/88 (42%)
Frame = +3
Query: 69 DGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRP 248
+G GP G+ G G KGD+G QGP+ G + +G
Sbjct: 293 EGPIGPRGYNGSQGPKGDQGVQGPI--------------------------GPQRYNGTQ 326
Query: 249 GGQGAIGMSGEKGDRGFPGRSGLTGEPG 332
G +G G+ G KGD+G PG G G G
Sbjct: 327 GSKGDQGVQGVKGDQGVPGPQGPKGAQG 354
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGI 104
G +G KG+ G +G+ G G G QGP G G+
Sbjct: 324 GTQGSKGDQGVQGVKGDQGVPGPQGPKGAQGV 355
>SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027)
Length = 617
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 1/117 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXX 185
G G + G GI Q G+ G G GI + GD G G G+P +
Sbjct: 380 GDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQPGDTGIP 439
Query: 186 XXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G+ G+ P G G+ + G G P R+G TG P GD G P
Sbjct: 440 TQPGDTGIPTQAGDTGI---PTQAGDTGIPTQAGYTGIPTRAGDTGIPTQAGDTGIP 493
>SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)
Length = 621
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP 158
G G +G G +G G G +G QGP G G G +G G QGP G +P
Sbjct: 35 GPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPSGPQGPSGPQVP 84
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
GQ+ Q G G +G G G +G QGP G G G +G G QGP G
Sbjct: 30 GQRPQ-GPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPSG 74
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G +G G +G G G +G QGP+G G +G + G QGP G
Sbjct: 47 GPNGPQGPNGPQGPNGPQGPNGPQGPSGPQGPSGPQVPNGPQGPSG 92
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G +G G +G G G G QGP+G G +G G QGP G
Sbjct: 53 GPNGPQGPNGPQGPNGPQGPSGPQGPSGPQVPNGPQGPSGPQGPNG 98
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGP 140
G G +G G +G +G G G Q P G G +G +G G QGP
Sbjct: 59 GPNGPQGPNGPQGPSGPQGPSGPQVPNGPQGPSGPQGPNGPQGP 102
Score = 33.9 bits (74), Expect = 0.095
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G G G G G GP G G G G +G GP G
Sbjct: 34 QGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPSGPQG 77
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G G G G G G G GP G G G G + GP G
Sbjct: 44 GPQGPNGPQGPNGPQGPNGPQGPNGPQGPSGPQGPSGPQVPNGPQG 89
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/133 (23%), Positives = 41/133 (30%), Gaps = 2/133 (1%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXX 194
G+ E G G+A + G DG G G E + G+ G E
Sbjct: 783 GEASEAGENGVASEAGEDGEASEAGEDGEASEASEAGEASEASEAGEASEASEAGEAGEA 842
Query: 195 XXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA-AVVY 371
GE G G G + E G+ G + GE + GE A
Sbjct: 843 GEAGEAGEAGEAGEASEAGEAGGASEASEAGEASEAGEASKAGEASKASEAGEAGEASEA 902
Query: 372 GQKGEPGPRGVPG 410
G+ E G G
Sbjct: 903 GEASEAGEASEAG 915
Score = 40.7 bits (91), Expect = 8e-04
Identities = 32/131 (24%), Positives = 42/131 (32%), Gaps = 1/131 (0%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXX 191
+ G+ E+G AG+ G G G GE G+ + G E
Sbjct: 775 EAGEASEVGEASEAGENGVASEAGEDGEASEAGEDGEASEASEAGEA--SEASEAGEASE 832
Query: 192 XXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA-AVV 368
GE G G G G +GE G +G E G GE + A
Sbjct: 833 ASEAGEAGEAGEAGEAGEAGEAGEASEAGEAGGASEASEAGEASEAGEASKAGEASKASE 892
Query: 369 YGQKGEPGPRG 401
G+ GE G
Sbjct: 893 AGEAGEASEAG 903
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/134 (24%), Positives = 44/134 (32%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G+ GE+ G+AG+ G G TG GE + G GE
Sbjct: 121 GVAGEVGEVSEAGVAGEVGKASEAGETGEASEAGEASEVGVAREASEA--GEASEASEVG 178
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVV 368
GE G G + E G+ G + GE G + GE +
Sbjct: 179 EVSEASEAGEAGEASEAVEAGEASEAGEASEAGEASEAGEASEAGEAGEASEAGEASEA- 237
Query: 369 YGQKGEPGPRGVPG 410
G+ E G V G
Sbjct: 238 -GKASEAGEASVAG 250
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/130 (23%), Positives = 43/130 (33%), Gaps = 1/130 (0%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXX 182
+ + G GE+G+ AG+ G G G+ E + G+ G E
Sbjct: 129 VSEAGVAGEVGKASEAGETGEASEAGEASEVGVAREASEAGEASEASEVGEVSEASEAGE 188
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
E G G G + E G+ G +G E G + GE A
Sbjct: 189 AGEASEAVEAGEASEAGEASEAGEASEAGEASEAGEAGEASEAGEASEAGKASEAGE--A 246
Query: 363 VVYGQKGEPG 392
V G+ E G
Sbjct: 247 SVAGEASEAG 256
Score = 35.9 bits (79), Expect = 0.023
Identities = 26/115 (22%), Positives = 36/115 (31%), Gaps = 1/115 (0%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXX 188
+ G+ GE+G AG+ G G G+ GE + + G GE
Sbjct: 472 EAGEAGEIGEASEAGETGEASEAGGASKAGVAGEASEASETIEAGEASKAGEASKAGGVS 531
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
E G G G + E G+ G G E G + GE
Sbjct: 532 EAGGASEAGEASEAGGASEAGEASEAGGASEAGEAIEAGEDGGASEAGGASEAGE 586
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/118 (22%), Positives = 35/118 (29%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G G+ GE+ G AG+ G G TG GE + G GE
Sbjct: 265 GVAGEVGEVSEAGEAGEVGKASEAGETGEASEAGEASEVGVAREASEA--GEASEASEVG 322
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
E G G + E G+ G + GE G + E A
Sbjct: 323 EVSEASEAGEASEAVEAGEASEAGEASKASEAGEASEAGEASEAGEAGEASEASEAIA 380
Score = 31.5 bits (68), Expect = 0.51
Identities = 20/98 (20%), Positives = 31/98 (31%), Gaps = 1/98 (1%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXX 182
+ + G+ GE+G+ AG+ G G G+ E + G+ G E
Sbjct: 273 VSEAGEAGEVGKASEAGETGEASEAGEASEVGVAREASEAGEASEASEVGEVSEASEAGE 332
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRG 296
GE G G + E G+ G
Sbjct: 333 ASEAVEAGEASEAGEASKASEAGEASEAGEASEAGEAG 370
Score = 28.3 bits (60), Expect = 4.7
Identities = 24/111 (21%), Positives = 34/111 (30%), Gaps = 2/111 (1%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG--YGLPGEXXXXXXXXXXXX 200
GE+ AG+ G G G G E G+ + G G GE
Sbjct: 431 GEVSEASEAGEAGEAGEAGEASEAGEASEAGEVCEAGGEASEAGEAGEIGEASEAGETGE 490
Query: 201 XXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
+ G+ G +GE G ++G E G + GE
Sbjct: 491 ASEAGGASKAGVAGEASEASETIEAGEASKAGEASKAGGVSEAGGASEAGE 541
>SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013)
Length = 496
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
+G G G G G G+ G QGP G G G +G KGDQG
Sbjct: 364 EGPMGPRGYNGSQGPKGDQGVQGPVGPQGYNGTQGSKGDQG 404
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
G G +G G +G G G G GP G+ G G KGD+G
Sbjct: 365 GPMGPRGYNGSQGPKGDQGVQGPVGPQGYNGTQGSKGDQG 404
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 69 DGAQGPTGFPGITGEKGDKGDQGPVG 146
+G GP G+ G G KGD+G QGPVG
Sbjct: 364 EGPMGPRGYNGSQGPKGDQGVQGPVG 389
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
++G G +G G G KGD+G G G G G +G KG+
Sbjct: 363 VEGPMGPRGYNGSQGPKGDQGVQGPVGPQGYNGTQGSKGD 402
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
EG G G +G+QGP G G+ G G +G G G
Sbjct: 364 EGPMGPRGYNGSQGPKGDQGVQGPVGPQGYNGTQG 398
>SB_46026| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 174
Score = 42.3 bits (95), Expect = 3e-04
Identities = 50/142 (35%), Positives = 57/142 (40%), Gaps = 5/142 (3%)
Frame = +3
Query: 18 GQKGELGREGIAG--QPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXX 188
G G G +G+ G Q G DG G G G+ G G G G G YGL G
Sbjct: 44 GLDGVYGLDGVYGLKQYGLDGLYGLDGVYGLDGLYGLDGLYGLDGLYGLDGVYGLD---- 99
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV- 365
G GLDG G G+ G G G G GL G G G G P +
Sbjct: 100 -----------GVYGLDGLYGLDEVYGLDGLYGLDGVYGLDGLYGLDGVYGLDG-PYGLD 147
Query: 366 -VYGQKGEPGPRGVPGIDGLPG 428
+YG G G GV G+DGL G
Sbjct: 148 GLYGLDGLYGLDGVYGLDGLMG 169
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/72 (41%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA-VVYGQKGEPGPR 398
G GLDG G G G+ G G G G G+ G G G G VYG G G
Sbjct: 64 GLYGLDGVYGLDGLYGLDGLYGLDGLYGLDGVYGLDGVYGLDGLYGLDEVYGLDGLYGLD 123
Query: 399 GVPGIDGLPGSD 434
GV G+DGL G D
Sbjct: 124 GVYGLDGLYGLD 135
Score = 38.3 bits (85), Expect = 0.004
Identities = 44/131 (33%), Positives = 51/131 (38%), Gaps = 1/131 (0%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXXXXXXXXXXXXXXXXXXR 221
G+ G G DG G + G+ G G G G G YGL G
Sbjct: 44 GLDGVYGLDGVYGLKQY-GLDGLYGLDGVYGLDGLYGLDG---------LYGLDGLYGLD 93
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G GLDG G G G+ G G G G+ G G G G VYG G G G
Sbjct: 94 GVYGLDGVYGLDGLYGLDEVYGLDGLYGLDGVYGLDGLYGLDG-----VYGLDGPYGLDG 148
Query: 402 VPGIDGLPGSD 434
+ G+DGL G D
Sbjct: 149 LYGLDGLYGLD 159
>SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04)
Length = 181
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
+ G PG G QGP G PG+ GEKGD+G G
Sbjct: 120 LRGPPGPPGPQGPKGDPGVRGEKGDRGIPG 149
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPG 305
RG G G G +G G+ GEKGDRG PG
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPG 149
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 312 GLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGI 413
G G PG +G KG+P G +GE G RG+PG+
Sbjct: 122 GPPGPPGPQGPKGDP-----GVRGEKGDRGIPGV 150
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 282 KGDRGFPGRSGLTGEPGYKGDKGE 353
+G G PG G G+PG +G+KG+
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGD 144
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGI 104
+G G G +G G PG G +G G PG+
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGV 150
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 336 KGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
+G G P G KG+PG RG G G+PG
Sbjct: 121 RGPPGPPGP--QGPKGDPGVRGEKGDRGIPG 149
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +3
Query: 315 LTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
++G PG +GD G P+ VV G G+PG G G +GLPG D
Sbjct: 6 ISGPPGIRGDPGIPS-VVRGPPGKPGLPGNKGKEGLPGDD 44
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 222 GERGLDGRP----GGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G RG G P G G G+ G KG G PG G+ G+PG G G+
Sbjct: 11 GIRGDPGIPSVVRGPPGKPGLPGNKGKEGLPGDDGVPGQPGPPGPPGD 58
Score = 35.9 bits (79), Expect = 0.023
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 MSGEKGDRGFPG-RSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
+SG G RG PG S + G PG G G G++G PG GVPG G PG
Sbjct: 6 ISGPPGIRGDPGIPSVVRGPPGKPGLPGNK-----GKEGLPGDDGVPGQPGPPG 54
Score = 35.1 bits (77), Expect = 0.041
Identities = 26/67 (38%), Positives = 30/67 (44%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G G+ G PG + G G G PG G G P GD G P G+PGP G
Sbjct: 8 GPPGIRGDPGIPSVV--RGPPGKPGLPGNKGKEGLP---GDDGVP--------GQPGPPG 54
Query: 402 VPGIDGL 422
PG DG+
Sbjct: 55 PPG-DGI 60
Score = 34.7 bits (76), Expect = 0.054
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGL 155
G G+PG G +G G PG G G G GP G G+
Sbjct: 24 GPPGKPGLPGNKGKEGLPGDDGVPGQPGPPGPPGDGI 60
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 9 GQKGQKGELGREGIA-GQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G +G+ G + G PG G G G G+ G+ G G GP G
Sbjct: 8 GPPGIRGDPGIPSVVRGPPGKPGLPGNKGKEGLPGDDGVPGQPGPPG 54
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGE 113
G G+ G G +G G PG+DG G G PG G+
Sbjct: 24 GPPGKPGLPGNKGKEGLPGDDGVPGQPGPPGPPGD 58
>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
Length = 391
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPG-RSGLTGEPGYKGDKG 350
RG G G PG +G G GE G GFPG R G +G PG G G
Sbjct: 80 RGPPGYPGIPGQKGPTGPPGEYGYNGFPGSRHGQSGFPGLHGPPG 124
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/48 (45%), Positives = 25/48 (52%)
Frame = +3
Query: 276 GEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G G G PG+ G TG PG G G P + +GQ G PG G PG G
Sbjct: 81 GPPGYPGIPGQKGPTGPPGEYGYNGFPGS-RHGQSGFPGLHGPPGPKG 127
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 78 QGPTGFPGITGEKGDKGDQGPVGY-GLPG 161
+GP G+PGI G+KG G G GY G PG
Sbjct: 80 RGPPGYPGIPGQKGPTGPPGEYGYNGFPG 108
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
GQKG G G G G PG+ G +GFPG+ G G KG
Sbjct: 90 GQKGPTGPPGEYGYNGFPGS--RHGQSGFPGLHGPPGPKG 127
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPGITGEKGDKGDQ-GPVGY-GLPG 161
G G PG G +GPTG PG G G G + G G+ GL G
Sbjct: 81 GPPGYPGIPGQKGPTGPPGEYGYNGFPGSRHGQSGFPGLHG 121
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 321 GEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G PGY G + GQKG GP G G +G PGS
Sbjct: 81 GPPGYPG--------IPGQKGPTGPPGEYGYNGFPGS 109
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDK-GDQG-PVGYGLPG 161
G G G PG G GP G G G G + G G P +G PG
Sbjct: 81 GPPGYPGIPGQKGPTGPPGEYGYNGFPGSRHGQSGFPGLHGPPG 124
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G+ G+ G++GI G+ G G G GFPG G G G GP G
Sbjct: 11 GKDGKDGKDGIDGRDGRPGPPGRHGFPGQRGMPGGTGPPGPPG 53
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG 341
G+ G+DGR G G G G G RG PG +G G PG G
Sbjct: 17 GKDGIDGRDGRPGPPGRHGFPGQRGMPGGTGPPGPPGIIG 56
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/53 (41%), Positives = 25/53 (47%)
Frame = +3
Query: 264 IGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGL 422
IG G+ G G GR G G PG G G+ G G GP G PGI G+
Sbjct: 10 IGKDGKDGKDGIDGRDGRPGPPGRHGFPGQR-----GMPGGTGPPGPPGIIGI 57
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
G+ G DG+ G G G G G GFPG+ G+ G G G G
Sbjct: 11 GKDGKDGKDGIDGRDGRPGPPGRHGFPGQRGMPGGTGPPGPPG 53
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
G+ G+ G GR+G G PG G G G PG TG G G
Sbjct: 14 GKDGKDGIDGRDGRPGPPGRHGFPGQRGMPGGTGPPGPPG 53
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITG 110
G+ G+ G GR G GQ G G GP G PGI G
Sbjct: 23 GRDGRPGPPGRHGFPGQRGMPGGTGPPGPPGIIG 56
Score = 35.5 bits (78), Expect = 0.031
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +3
Query: 303 GRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G+ G G+ G G G P G+ G PG RG+PG G PG
Sbjct: 11 GKDGKDGKDGIDGRDGRPGPP--GRHGFPGQRGMPGGTGPPG 50
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G+ G G G+ G G G PGR G G+ G G G P
Sbjct: 11 GKDGKDGKDGIDGRDGRPGPPGRHGFPGQRGMPGGTGPP 49
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV 365
G DG+ G G G G G G G G G PG G G P +
Sbjct: 11 GKDGKDGKDGIDGRDGRPGPPGRHGFPGQRGMPGGTGPPGPPGII 55
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G G G+ G +G G G G+KGDKGDQG G
Sbjct: 249 GLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQG 285
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +3
Query: 255 QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKG 383
QG G G+KGD+G G G+ G G KGDKG+ A G KG
Sbjct: 248 QGLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGA--QGAKG 288
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 21 QKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
++G G +G G G+ G QG GF G G+KGD+G QG G
Sbjct: 247 KQGLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKG 288
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 243 RPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
+ G +G G G+KGDRG G G G+ G KGD+G A
Sbjct: 247 KQGLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGA 286
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTG 323
+G++G G G QG G G+KGD+G G G G
Sbjct: 254 KGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKG 288
Score = 33.9 bits (74), Expect = 0.095
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 297 FPGRSGLTGEPGYKGDKGEPA-AVVYGQKGEPGPRGVPGIDGLPG 428
F + GL G G KGDKG+ + G KG+ G +G G G G
Sbjct: 244 FTFKQGLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKG 288
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITG 110
G KG KG+ G +GI G G+ G +G G G G
Sbjct: 255 GDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKG 288
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYK 338
+G++G G G QG G G+KGD+G G GL K
Sbjct: 257 KGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKGLMNSTSSK 296
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 78 QGPTGFPGITGEKGDKGDQGPVGY 149
QG G G G+KGD+GDQG G+
Sbjct: 248 QGLRGPKGDKGDKGDRGDQGIQGF 271
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFS 110
+P +P +P P PPG P P +PL P P P P + +P P P P P +P +
Sbjct: 202 APPTPPMPETPLPPGSPHIPPAPLHPHIPPAPPNPSKAIA--TPNPPMPETPLPPATP-N 258
Query: 109 PVIP 98
P IP
Sbjct: 259 PFIP 262
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSP--FWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSP 116
+P +P IA P +P P P +P F P P P +P +P P P P PL+P
Sbjct: 232 APPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPPNPSIPAPPNPSIPLAP 291
Query: 115 FSPVIP 98
+P IP
Sbjct: 292 PNPYIP 297
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -3
Query: 286 PFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPF-SPGNP*PTGPWSPLSPFS 110
P +PL P P P PSK + +P P P P P +PF P +P P+ P +P +P
Sbjct: 221 PPAPLHPHIPPAPPNPSKAIATPNPPMPETPLPPATP-NPFIPPASPNPSIPPAPPNPSI 279
Query: 109 PVIP 98
P P
Sbjct: 280 PAPP 283
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -3
Query: 280 SPLIPIAPCPPGLPSKPRSP-LSPFWPMIPG-IPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
+P I PP + P P P P IP P P P P PT P +P P +P
Sbjct: 153 TPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPPTPPAPPSPPIPTAPPTPPMPETP 212
Query: 106 VIPGN 92
+ PG+
Sbjct: 213 LPPGS 217
>SB_36020| Best HMM Match : Collagen (HMM E-Value=0.31)
Length = 212
Score = 41.1 bits (92), Expect = 6e-04
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 1/151 (0%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGEXXXXXXXXXXXXXXXX 212
G E I G+ G + G I GE+ KG++ G + GE
Sbjct: 11 GEEAIKGEEAIKGEEAIKGEETIKGEEAIKGEEAIKGVETIKGEEAIKGEETIKGEEAIK 70
Query: 213 XXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 392
+G++ G + G KG+ G + GE KG++ + G++ G
Sbjct: 71 GEEAIKGVEAIKGEEAIKGEEAIKGEESIKGEETIKGEEAIKGEE-----AIKGEETIKG 125
Query: 393 PRGVPGIDGLPGSDXXXXXXXXXXXXXMKGD 485
+ G++ + G + +KG+
Sbjct: 126 EEAIKGVETIKGEEAIKGEEAIKGEETIKGE 156
Score = 40.7 bits (91), Expect = 8e-04
Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 4/161 (2%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXX 194
KG++ G E I G+ G + G I GE+ KG++ + GE
Sbjct: 22 KGEEAIKGEETIKGEEAIKGEEAIKGVETIKGEEAIKGEE-----TIKGE---EAIKGEE 73
Query: 195 XXXXXXXXRGERGLDGRPGGQGAIGMSGE---KGDRGFPGRSGLTGEPGYKGDKG-EPAA 362
+GE + G +G + GE KG+ G + GE KG++ +
Sbjct: 74 AIKGVEAIKGEEAIKGEEAIKGEESIKGEETIKGEEAIKGEEAIKGEETIKGEEAIKGVE 133
Query: 363 VVYGQKGEPGPRGVPGIDGLPGSDXXXXXXXXXXXXXMKGD 485
+ G++ G + G + + G + +KG+
Sbjct: 134 TIKGEEAIKGEEAIKGEETIKGEEAIKGEEAIKGEETIKGE 174
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 10/150 (6%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGEXX---XXXX 182
KG++ G E I G+ G + G I GE+ KG++ G + GE
Sbjct: 52 KGEEAIKGEETIKGEEAIKGEEAIKGVEAIKGEEAIKGEEAIKGEESIKGEETIKGEEAI 111
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGE---KGDRGFPGRSGLTGEPGYKGD--- 344
+GE + G +G + GE KG+ G + GE KG+
Sbjct: 112 KGEEAIKGEETIKGEEAIKGVETIKGEEAIKGEEAIKGEETIKGEEAIKGEEAIKGEETI 171
Query: 345 KGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
KGE A + +K G + G + + G +
Sbjct: 172 KGEEA--IKREKTIKGEETIKGEEAIKGEE 199
Score = 34.7 bits (76), Expect = 0.054
Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 1/143 (0%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXX 188
G++ KGE +G+ G + +G G KG++ +G + GE
Sbjct: 65 GEEAIKGEEAIKGVEAIKGEEAIKGEEAIKGEESIKGEETIKGE--EAIKGEEAIKGEET 122
Query: 189 XXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG-EPAAV 365
+G + G + G KG+ G + GE KG++ +
Sbjct: 123 IKGEEAIKGVETIKGEEAIKGEEAIKGEETIKGEEAIKGEEAIKGEETIKGEEAIKREKT 182
Query: 366 VYGQKGEPGPRGVPGIDGLPGSD 434
+ G++ G + G + + G +
Sbjct: 183 IKGEETIKGEEAIKGEETIKGEE 205
>SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 277 PLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLSPFSPVI 101
PL P P LP PR P + P+ PGIP P +PG P P +P PF+ +
Sbjct: 301 PLTPRIPFTHALPLTPRIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPGIPFTHAL 360
Query: 100 P 98
P
Sbjct: 361 P 361
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -3
Query: 286 PFSPLIPIAPCPP---GLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLS 119
PF+ +P+ P P LP PR P + P+ PGIP P +PG P P +P
Sbjct: 343 PFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPGI 402
Query: 118 PFSPVIP 98
PF+ +P
Sbjct: 403 PFTHALP 409
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 286 PFSPLIPIA---PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLS 119
P +P IP P PG+P PL+P P +P P PF+ P G P++
Sbjct: 277 PLTPRIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPRIPFTHALPLTPGIPFTHAL 336
Query: 118 PFSPVIP 98
P +P IP
Sbjct: 337 PLTPGIP 343
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 286 PFSPLIPIA---PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLS 119
P +P IP P PG+P PL+P P +P P PF+ P P P++
Sbjct: 313 PLTPRIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPRIPFTHAL 372
Query: 118 PFSPVIP 98
P +P IP
Sbjct: 373 PLTPGIP 379
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 286 PFSPLIPIA---PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLS 119
P +P IP P PG+P PL+P P +P P PF+ P G P++
Sbjct: 337 PLTPGIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPGIPFTHALPLTPGIPFTHAL 396
Query: 118 PFSPVIP 98
P +P IP
Sbjct: 397 PLTPGIP 403
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 286 PFSPLIPIA---PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLS 119
P +P IP P PG+P PL+P P +P P PF+ P P P++
Sbjct: 361 PLTPRIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPRIPFTHAL 420
Query: 118 PFSPVIP 98
P +P IP
Sbjct: 421 PLTPRIP 427
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 286 PFSPLIPIA---PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLS 119
P +P IP P PG+P PL+P P +P P PF+ P G P++
Sbjct: 325 PLTPGIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPGIPFTHAL 384
Query: 118 PFSPVIP 98
P +P IP
Sbjct: 385 PLTPGIP 391
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 292 RSPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSP 116
R PF+ +P+ P G+P PL+P P +P P PF+ P P P++ P
Sbjct: 257 RIPFTHALPLTP---GIPFTHALPLTPRIPFTHALPLTPGIPFTHALPLTPRIPFTHALP 313
Query: 115 FSPVIP 98
+P IP
Sbjct: 314 LTPRIP 319
Score = 35.1 bits (77), Expect = 0.041
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Frame = -3
Query: 292 RSPFSPLIPIAPCPP---GLPSKPRSPLS---PFWPMIP---GIPCGPWSPFSPGNP*PT 140
R PF+ +P+ P P LP PR P + P P IP +P P PF+ P
Sbjct: 281 RIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPRIPFTHALPLTPGIPFTHALPLTP 340
Query: 139 G-PWSPLSPFSPVIP 98
G P++ P +P IP
Sbjct: 341 GIPFTHALPLTPGIP 355
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 286 PFSPLIPIA---PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLS 119
P +P IP P PG+P PL+P P +P P PF+ P P P++
Sbjct: 373 PLTPGIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPRIPFTHAL 432
Query: 118 PFSP 107
P +P
Sbjct: 433 PLTP 436
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -3
Query: 286 PFSPLIPIAPCPP---GLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSP 116
P +PLIP P G+P PL+P P +P P PF+ P +P P
Sbjct: 193 PLTPLIPFTHALPLTLGIPFTHALPLTPRIPFTLALPLTPRIPFTHAL-----PLTPRIP 247
Query: 115 FSPVIP 98
F+ V+P
Sbjct: 248 FTHVLP 253
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = -3
Query: 286 PFSPLIP---IAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLS 119
P +P IP + P +P PL+P P +P P PF+ P G P++
Sbjct: 241 PLTPRIPFTHVLPLTSRIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPGIPFTHAL 300
Query: 118 PFSPVIP 98
P +P IP
Sbjct: 301 PLTPRIP 307
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Frame = -3
Query: 292 RSPFSPLIPIAPCPP---GLPSKPRSPLSPFWPM---IP---GIPCGPWSPFSPGNP-*P 143
R PF+ +P+ P P LP PR P + P+ IP +P P PF+ P P
Sbjct: 221 RIPFTLALPLTPRIPFTHALPLTPRIPFTHVLPLTSRIPFTHALPLTPGIPFTHALPLTP 280
Query: 142 TGPWSPLSPFSPVIP 98
P++ P +P IP
Sbjct: 281 RIPFTHALPLTPGIP 295
Score = 30.7 bits (66), Expect = 0.88
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = -3
Query: 286 PFSPLIPIA---PCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLS 119
P +P IP P P +P PL+P P +P PF+ P G P++
Sbjct: 217 PLTPRIPFTLALPLTPRIPFTHALPLTPRIPFTHVLPLTSRIPFTHALPLTPGIPFTHAL 276
Query: 118 PFSPVIP 98
P +P IP
Sbjct: 277 PLTPRIP 283
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 286 PFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP-*PTGPWSPLSPFS 110
PF+ +P+ P +P PL+ P +P P PF+ P P P++ P +
Sbjct: 187 PFTHALPLTPL---IPFTHALPLTLGIPFTHALPLTPRIPFTLALPLTPRIPFTHALPLT 243
Query: 109 PVIP 98
P IP
Sbjct: 244 PRIP 247
>SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 303 GRSGLTGEPGYKGDKGEPAA-VVYGQKGEPGPRGVPGI 413
GR G G+PG +G KG P G +G PGPRG G+
Sbjct: 77 GRDGRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSGV 114
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
GR+G G+P G +GP G PG G G +G GP G
Sbjct: 77 GRDGRDGKP---GLRGPKGAPGGRGRIGARGPPGPRG 110
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/64 (40%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPG----RSGLTGEPG-----YKGDKGEPAAVVYG 374
G RG G PGG+G IG G G RG G R G T P YKG G +G
Sbjct: 86 GLRGPKGAPGGRGRIGARGPPGPRGSSGVQYVRWGKTSCPSSARLVYKGRVGGEWYGHFG 145
Query: 375 QKGE 386
GE
Sbjct: 146 GAGE 149
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G RG G PG G GM GE+G G G G G +G+KGE
Sbjct: 67 GRRGPVGPPGVPGPRGMQGEEGPAGNKGPQGDPGPAAMEGNKGE 110
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY-GLPGE 164
G GR G G PG G +G G G G KG +GD GP G GE
Sbjct: 64 GGPGRRGPVGPPGVPGPRGMQGEEGPAGNKGPQGDPGPAAMEGNKGE 110
Score = 35.5 bits (78), Expect = 0.031
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLP 425
P + +G G + G PGR G G PG G +G +GE GP G G G P
Sbjct: 50 PSSRSVVGCGGLRA--GGPGRRGPVGPPGVPGPRG--------MQGEEGPAGNKGPQGDP 99
Query: 426 G 428
G
Sbjct: 100 G 100
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +3
Query: 51 AGQPGNDGAQGPTGFPG---ITGEKGDKGDQGPVG 146
AG PG G GP G PG + GE+G G++GP G
Sbjct: 63 AGGPGRRGPVGPPGVPGPRGMQGEEGPAGNKGPQG 97
Score = 34.7 bits (76), Expect = 0.054
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGD 131
G G G G G+ G+ G G +GP G PG +G+KG+
Sbjct: 70 GPVGPPGVPGPRGMQGEEGPAGNKGPQGDPGPAAMEGNKGE 110
Score = 34.3 bits (75), Expect = 0.072
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +3
Query: 258 GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G G G G G PG G+ GE G G+K G +G+PGP + G G
Sbjct: 64 GGPGRRGPVGPPGVPGPRGMQGEEGPAGNK--------GPQGDPGPAAMEGNKG 109
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 249 GGQGAIGMSGEKGDRGFPGRSGL-TGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLP 425
G GA + R G GL G PG +G G P G PGPRG+ G +G
Sbjct: 39 GACGACRSARVPSSRSVVGCGGLRAGGPGRRGPVGPP--------GVPGPRGMQGEEGPA 90
Query: 426 GS 431
G+
Sbjct: 91 GN 92
>SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG 341
G PG G G GEKG RG PG +G G PG G
Sbjct: 1 GIPGRAGDAGKPGEKGSRGPPGPAGPIGNPGKPG 34
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGP 140
GR G AG+PG G++GP PG G G+ G GP
Sbjct: 4 GRAGDAGKPGEKGSRGP---PGPAGPIGNPGKPGP 35
Score = 33.9 bits (74), Expect = 0.095
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +3
Query: 321 GEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G PG GD G+P G +G PGP G G G PG
Sbjct: 1 GIPGRAGDAGKPGEK--GSRGPPGPAGPIGNPGKPG 34
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP 395
G+ G GD G PG G G PG G G P G+PGP
Sbjct: 1 GIPGRAGDAGKPGEKGSRGPPGPAGPIGNP--------GKPGP 35
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 72 GAQGPTGFPGITGEKGDKGDQGPVG-YGLPGE 164
G G G G GEKG +G GP G G PG+
Sbjct: 1 GIPGRAGDAGKPGEKGSRGPPGPAGPIGNPGK 32
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGP 86
G+ G+KG G G AG GN G GP
Sbjct: 10 GKPGEKGSRGPPGPAGPIGNPGKPGP 35
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSG 314
G G G+PG +G+ G G G G PG+ G
Sbjct: 4 GRAGDAGKPGEKGSRGPPGPAGPIGNPGKPG 34
>SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029)
Length = 367
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEP 389
+ GEKGD+ G G+ G G KGDKG+ A G KG+P
Sbjct: 103 LKGEKGDKCDKGDQGIQGVKGDKGDKGDQGA--QGVKGDP 140
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEP 329
+GE+G G QG G+ G+KGD+G G G+ G+P
Sbjct: 104 KGEKGDKCDKGDQGIQGVKGDKGDKGDQGAQGVKGDP 140
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+ G+ G+ +G G G+ G+KGDKGDQG G
Sbjct: 103 LKGEKGDKCDKGDQGIQGVKGDKGDKGDQGAQG 135
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGE 113
G+KG K + G +GI G G+ G +G G G+ G+
Sbjct: 105 GEKGDKCDKGDQGIQGVKGDKGDKGDQGAQGVKGD 139
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 51 AGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG-YGLPGE 164
A G G + G GI G KGDKGD+G G G+ G+
Sbjct: 101 ASLKGEKGDKCDKGDQGIQGVKGDKGDKGDQGAQGVKGD 139
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G + G QG G G G+KGD+G QG G
Sbjct: 104 KGEKGDKCDKGDQGIQGVKGDKGDKGDQGAQGVKG 138
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 24 KGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGD 131
KGE G + G G G +G G G G +G KGD
Sbjct: 104 KGEKGDKCDKGDQGIQGVKGDKGDKGDQGAQGVKGD 139
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 33 LGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
L ++ + GQ G+ G GP G PG G +G +G +GP G
Sbjct: 249 LRQKWVDGQKGDRGDMGPPGHPGPPGVRGRRGKRGPPG 286
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITG 110
GQKG +G++G G G PG G +G G PG G
Sbjct: 256 GQKGDRGDMGPPGHPGPPGVRGRRGKRGPPGPPG 289
Score = 34.7 bits (76), Expect = 0.054
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 225 ERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGV 404
++ +DG+ G +G +G G G G GR G G PG G A G P P G
Sbjct: 251 QKWVDGQKGDRGDMGPPGHPGPPGVRGRRGKRGPPGPPGPPNGGATPHPG--AMPTPSGE 308
Query: 405 P 407
P
Sbjct: 309 P 309
Score = 33.9 bits (74), Expect = 0.095
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPG--RSGLTGEPG-YKGDKGEP 356
RG+ G G PG G G G++G G PG G T PG GEP
Sbjct: 261 RGDMGPPGHPGPPGVRGRRGKRGPPGPPGPPNGGATPHPGAMPTPSGEP 309
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTG 92
G +G G G G AG PG DGA GP G
Sbjct: 125 GPQGLPGRDGLPGKAGLPGRDGAMGPPG 152
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
L QK G+ G G G PG+ G PG+ G +G +G GP G
Sbjct: 249 LRQKWVDGQKGDRGDMGPPGHPGP------PGVRGRRGKRGPPGPPG 289
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3
Query: 21 QKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYG 152
QK G++G G G G GP G G G++G G GP G
Sbjct: 251 QKWVDGQKGDRGDMGPPGHPGPPGVRGRRGKRGPPGPPGPPNGG 294
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 249 GGQGAIGMSGEKGDRGFPGRSGLTGEPG 332
G QG G G G G PGR G G PG
Sbjct: 125 GPQGLPGRDGLPGKAGLPGRDGAMGPPG 152
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPV 143
+G G PG DG G G PG G G G V
Sbjct: 124 QGPQGLPGRDGLPGKAGLPGRDGAMGPPGRDATV 157
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG 128
G +G++G+ G G G P P P +GE DKG
Sbjct: 274 GVRGRRGKRGPPGPPGPPNGGATPHPGAMPTPSGEPPDKG 313
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +3
Query: 102 ITGEKGDKGDQGPVGY-GLPG 161
+ G+KGD+GD GP G+ G PG
Sbjct: 254 VDGQKGDRGDMGPPGHPGPPG 274
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 372 GQKGEPGPRGVPGIDGLPGSD 434
G +G PG G+PG GLPG D
Sbjct: 125 GPQGLPGRDGLPGKAGLPGRD 145
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +3
Query: 321 GEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G+ G +GD G P G G PG RG G G PG
Sbjct: 256 GQKGDRGDMGPP-----GHPGPPGVRGRRGKRGPPG 286
>SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078)
Length = 102
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 306 RSGLTGEPGYKGDKGEPAA-VVYGQKGEPGPRGVPGI 413
R G G+PG +G KG P G +G PGPRG G+
Sbjct: 2 RDGRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSGV 38
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPG 305
G RG G PGG+G IG G G RG G
Sbjct: 10 GLRGPKGAPGGRGRIGARGPPGPRGSSG 37
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G+ G G +GP G PG G G +G GP G
Sbjct: 4 GRDGKPGLRGPKGAPGGRGRIGARGPPGPRG 34
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 39 REGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
R+G G+PG G +G G G G +G G +G G
Sbjct: 2 RDGRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSG 37
>SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05)
Length = 510
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G+ +G G G+ EKGDKGDQG G
Sbjct: 346 QGPKGDKGDKDDKGDQGMQGVKDEKGDKGDQGAQG 380
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 255 QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
QG G G+K D+G G G+ E G KGD+G
Sbjct: 346 QGPKGDKGDKDDKGDQGMQGVKDEKGDKGDQG 377
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGD 131
G G G +GP G PG G +GD+GD
Sbjct: 240 GLQGPKGERGPPGAPGAAGVRGDRGD 265
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKG 383
G G+KGD+ G G+ G KGDKG+ A G KG
Sbjct: 347 GPKGDKGDKDDKGDQGMQGVKDEKGDKGDQGA--QGVKG 383
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 366 VYGQKGEPGPRGVPGIDGLPGSD 434
V G +GE GP+G PG DG GS+
Sbjct: 13 VQGPRGEQGPQGAPGRDGSSGSN 35
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTG 323
+G++G G QG G+ EKGD+G G G+ G
Sbjct: 349 KGDKGDKDDKGDQGMQGVKDEKGDKGDQGAQGVKG 383
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGD 344
G+ G KG+RG PG G G G +GD
Sbjct: 240 GLQGPKGERGPPGAPGAAGVRGDRGD 265
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G +G G + G QG G G+KGD+G QG G
Sbjct: 347 GPKGDKGDKDDKGDQGMQGVKDEKGDKGDQGAQGVKG 383
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 255 QGAIGMSGEKGDRGFPGRSGLTGEPG 332
QG G GE+G G PG +G+ G+ G
Sbjct: 239 QGLQGPKGERGPPGAPGAAGVRGDRG 264
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGD 290
+G +G G PG GA G+ G++GD
Sbjct: 242 QGPKGERGPPGAPGAAGVRGDRGD 265
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPG 410
+ G KGD+G G G G K +KG+ KG+ G +GV G
Sbjct: 345 LQGPKGDKGDKDDKGDQGMQGVKDEKGD--------KGDQGAQGVKG 383
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+ G G+ G + G G+ G K +KGD+G G
Sbjct: 345 LQGPKGDKGDKDDKGDQGMQGVKDEKGDKGDQG 377
>SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003)
Length = 157
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQ 134
G +GI G PG G GP G G G G+KG Q
Sbjct: 1 GPQGIQGNPGYQGVPGPRGMQGEEGPAGNKGPQ 33
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 258 GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
G G+ G G +G PG G+ GE G G+KG
Sbjct: 1 GPQGIQGNPGYQGVPGPRGMQGEEGPAGNKG 31
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY----GLPG 161
EG G G +G+ GP G G G G +G QGP+G G+PG
Sbjct: 418 EGPMGPRGYNGSIGPQGLAGAEGHNGTQGIQGPMGVNGSAGVPG 461
Score = 31.5 bits (68), Expect = 0.51
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
M G G RG+ G G G G +G G +G GP GV G G+PG
Sbjct: 417 MEGPMGPRGYNGSIGPQGLAGAEGHNGT--------QGIQGPMGVNGSAGVPG 461
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPG 101
G G +G G +GI G G +G+ G G PG
Sbjct: 434 GLAGAEGHNGTQGIQGPMGVNGSAGVPGPPG 464
>SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048)
Length = 763
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G PG G GP G PG G+ G G GP G
Sbjct: 177 GPQGPPGPQGLPGPQGVPGPAGDIGPSGSSGPQG 210
Score = 34.7 bits (76), Expect = 0.054
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +3
Query: 60 PGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP 158
PG G GP G PG G G GD GP G P
Sbjct: 176 PGPQGPPGPQGLPGPQGVPGPAGDIGPSGSSGP 208
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAA 362
PG QG G G G +G PG +G G G G +G P +
Sbjct: 176 PGPQGPPGPQGLPGPQGVPGPAGDIGPSGSSGPQGPPGS 214
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 372 GQKGEPGPRGVPGIDGLPG 428
G +G PGP+G+PG G+PG
Sbjct: 177 GPQGPPGPQGLPGPQGVPG 195
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +3
Query: 300 PGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
PG G G G G +G P G G+ GP G G G PGS
Sbjct: 176 PGPQGPPGPQGLPGPQGVP-----GPAGDIGPSGSSGPQGPPGS 214
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 36.7 bits (81), Expect = 0.013
Identities = 39/127 (30%), Positives = 46/127 (36%), Gaps = 3/127 (2%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERG 233
G+P N GA TG P TGE + G+ P G P GE
Sbjct: 1232 GEPYNTGAPYNTGEPYRTGEPYNTGE--PYNTGEPYSTGAPYSTGEPYRTGEPYRTGEPY 1289
Query: 234 LDGRPGGQGAIGMSGEKGDRGFPGRSG---LTGEPGYKGDKGEPAAVVYGQKGEPGPRGV 404
G P G +GE + G P +G TGEP G+ A GEP GV
Sbjct: 1290 NTGEPYNTGEPYNTGEPYNTGEPYNTGEPYNTGEPISTGEPYNTGAPY--NTGEPYNIGV 1347
Query: 405 PGIDGLP 425
P G P
Sbjct: 1348 PYNTGAP 1354
Score = 33.1 bits (72), Expect = 0.17
Identities = 41/143 (28%), Positives = 49/143 (34%), Gaps = 7/143 (4%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
G+ G G P N G TG P TGE + G+ P G P
Sbjct: 1226 GEPYSTGEPYNTGAPYNTGEPYRTGEPYNTGEPYNTGE--PYSTGAPYSTGEPYRTGEPY 1283
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSG---LTGEP---GYKGDKGEPA 359
GE G P G +GE + G P +G TGEP G + GEP
Sbjct: 1284 RTGEPYNTGEPYNTGEPYNTGEPYNTGEPYNTGEPYNTGEPISTGEPYNTGAPYNTGEPY 1343
Query: 360 AV-VYGQKGEPGPRGVPGIDGLP 425
+ V G P G P G P
Sbjct: 1344 NIGVPYNTGAPYNTGAPYSTGEP 1366
Score = 31.5 bits (68), Expect = 0.51
Identities = 37/136 (27%), Positives = 44/136 (32%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
G+ G G+P + G TG P TGE + G P G P
Sbjct: 1310 GEPYNTGEPYNTGEPISTGEPYNTGAPYNTGEPYNIGV--PYNTGAPYNTGAPYSTGEPY 1367
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQ 377
GE G P GA +G G P R+G G + GEP
Sbjct: 1368 RTGEPYNTGEPYNTGEPYNTGAPYSTGAPYSTGEPYRTGEPYNTGEPYNTGEPY-----N 1422
Query: 378 KGEPGPRGVPGIDGLP 425
GEP G P G P
Sbjct: 1423 TGEPISTGEPYNTGAP 1438
Score = 31.5 bits (68), Expect = 0.51
Identities = 31/107 (28%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
G+ +G G P N GA TG P TGE + G+ P G P
Sbjct: 1340 GEPYNIGVPYNTGAPYNTGAPYSTGEPYRTGEPYNTGE--PYNTGEPYNTGAPYSTGAPY 1397
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGL---TGEP 329
GE G P G +GE G P +G TGEP
Sbjct: 1398 STGEPYRTGEPYNTGEPYNTGEPYNTGEPISTGEPYNTGAPYNTGEP 1444
Score = 29.9 bits (64), Expect = 1.5
Identities = 37/138 (26%), Positives = 44/138 (31%), Gaps = 2/138 (1%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXX 197
G+ G G+P N G TG P TGE G+ P G P
Sbjct: 1244 GEPYRTGEPYNTGEPYNTGEPYSTGAPYSTGEPYRTGE--PYRTGEPYNTGEPYNTGEPY 1301
Query: 198 XXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEP--AAVVY 371
GE G P G +GE + G P +G G + G P Y
Sbjct: 1302 NTGEPYNTGEPYNTGEPYNTGEPISTGEPYNTGAPYNTGEPYNIGVPYNTGAPYNTGAPY 1361
Query: 372 GQKGEPGPRGVPGIDGLP 425
GEP G P G P
Sbjct: 1362 -STGEPYRTGEPYNTGEP 1378
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -3
Query: 262 APCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLSPFSPVIPGN 92
AP G P + P + P G P +P+S G P TG P+ P++ P N
Sbjct: 1239 APYNTGEPYRTGEPYNTGEPYNTGEPYSTGAPYSTGEPYRTGEPYRTGEPYNTGEPYN 1296
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Frame = -3
Query: 277 PLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTG-PWSPLSPFSPVI 101
P+ P G P P + P G P +P+S G P TG P++ P++
Sbjct: 1324 PISTGEPYNTGAPYNTGEPYNIGVPYNTGAPYNTGAPYSTGEPYRTGEPYNTGEPYNTGE 1383
Query: 100 PGNXXXXXXXXXXXXXXXXSRPSSPF 23
P N R P+
Sbjct: 1384 PYNTGAPYSTGAPYSTGEPYRTGEPY 1409
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG 341
G GL G G G GM+G+ G G G SG+TG+ G G
Sbjct: 1785 GMTGLTGYTGYTGYTGMTGKTGMSGKTGMSGVTGDSGMSG 1824
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 392
G+ G G G GM+G G G+ G +G+TG+ G G G + V G G G
Sbjct: 1773 GMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSGKTG--MSGVTGDSGMSG 1824
Score = 35.9 bits (79), Expect = 0.023
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+ G G G G++G G G G TG+ G+TG+ G G G G
Sbjct: 1771 KSGMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSGKTGMSG 1815
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 273 SGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEPGPRGVPGIDGLPG 428
SG G G G SG+TG GY G G G G+ G GV G G+ G
Sbjct: 1772 SGMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSGKTGMSGVTGDSGMSG 1824
>SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036)
Length = 60
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLP 425
PG +G G++G +G RG PG + Y V G KG+ G G PG++G
Sbjct: 1 PGARGPPGVTGAQGPRGPPG------QVLYMNSTSGNTTAVPGPKGDKGDPGRPGLNGTD 54
Query: 426 G 428
G
Sbjct: 55 G 55
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 14/48 (29%)
Frame = +3
Query: 45 GIAGQPGNDGAQGPTGFPG--------------ITGEKGDKGDQGPVG 146
G G PG GAQGP G PG + G KGDKGD G G
Sbjct: 2 GARGPPGVTGAQGPRGPPGQVLYMNSTSGNTTAVPGPKGDKGDPGRPG 49
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +3
Query: 96 PGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMS 275
PG G G G QGP G PG+ +G++G GRPG G G
Sbjct: 1 PGARGPPGVTGAQGP--RGPPGQ-VLYMNSTSGNTTAVPGPKGDKGDPGRPGLNGTDGRV 57
Query: 276 GE 281
E
Sbjct: 58 SE 59
>SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = +3
Query: 264 IGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
+G G G PG G G PG G AV+ G G PGP G PG G
Sbjct: 176 LGFFVNNGVMGPPGPPGPPG-PGLVGSGSGAGAVIAGPPGPPGPPGPPGPPG 226
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -3
Query: 262 APCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIP 98
AP PP P+KP +P P P IP P P + +P P P P P P P +P
Sbjct: 776 APPPPPPPTKPATPRVP--PNIPSRP--PGARPTPPPPPPGKPTKPTKPSLPPVP 826
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -3
Query: 286 PFSPLIPIAP-CPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP 149
P P P P PP +PS+P P PG P P P P P
Sbjct: 780 PPPPTKPATPRVPPNIPSRPPGARPTPPPPPPGKPTKPTKPSLPPVP 826
>SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 417
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G+ G KG+RG PG S G PG +GD+G+
Sbjct: 254 GLQGPKGERGLPGAS---GAPGARGDRGD 279
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 39 REGIAGQPGNDGAQGPTGFPGITGEKGD 122
++G+ G G G G +G PG G++GD
Sbjct: 252 KQGLQGPKGERGLPGASGAPGARGDRGD 279
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 63 GNDGAQGPTGFPGITGEKGDKGDQG 137
G G +G G PG +G G +GD+G
Sbjct: 254 GLQGPKGERGLPGASGAPGARGDRG 278
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGD 290
+GERGL PG GA G G++GD
Sbjct: 259 KGERGL---PGASGAPGARGDRGD 279
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQG 83
G +G KGE G G +G PG G +G
Sbjct: 254 GLQGPKGERGLPGASGAPGARGDRG 278
>SB_583| Best HMM Match : Collagen (HMM E-Value=0.0088)
Length = 69
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGD 131
G G G+ G +G G+ +DG G G G G+ GD GD
Sbjct: 25 GDDGDDGDDGDDGDDGEDDDDGEDGDDGDDGDDGDDGDDGD 65
Score = 33.9 bits (74), Expect = 0.095
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G G+ G +G G G D G G G G+ GD GD G
Sbjct: 25 GDDGDDGDDGDDGDDGEDDDDGEDGDDGDDGDDGDDGDDG 64
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G+ G +G G G+DG G G G+ GD GD G G
Sbjct: 25 GDDGDDGDDGDDGDDGEDDDDGEDGDDGDDGDDGDDGDDG 64
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G+DG G G GE GD GD G G
Sbjct: 24 DGDDGDDGDDGDDGDDGEDDDDGEDGDDGDDGDDG 58
>SB_47682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -3
Query: 271 IPIAPCPPGLPSKPRSPLSPFWPMIPGIPC--GPWSPFSPGNP*PTGPWSPLSPFSPV 104
+P+AP P P P +P P P + PC GP G P P PL+P P+
Sbjct: 97 MPLAPPMPLAPPVPLAPPMPLAPPVQQAPCGAGPMQAPCAGQQMPLAPPMPLAPPVPL 154
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -3
Query: 286 PFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
P +PL+P+AP P P ++P P G P +P P P P PL+P P
Sbjct: 61 PLAPLMPLAPPMPLAPPVQQAPCGAGTMQAP--CAGQQMPLAP--PMPLAPPVPLAPPMP 116
Query: 106 VIP 98
+ P
Sbjct: 117 LAP 119
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 286 PFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSP-GNP*PTG 137
P +P +P+AP P P +P P P + PCG +P G P G
Sbjct: 141 PLAPPMPLAPPVPLALPMPLAPPMPLAPPVQQAPCGAGPMQAPCGGGPPAG 191
>SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8)
Length = 1007
Score = 34.7 bits (76), Expect = 0.054
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Frame = -2
Query: 518 SWLSLRTRE-PSVSFHSWGTIQS--WSTRGTI*PWKTIYSRN----TAWSWFSFLTIN-- 366
+W+S+ T SV+ ++W ++ + W + T W ++ + N ++W S T N
Sbjct: 116 NWVSVATYNWVSVATYNWVSVATYNWVSVATY-NWVSVATYNWVSVATYNWVSVATYNWV 174
Query: 365 DCCRFTFITFVAWFXXXXXXXXXXSIAFFTTHTYCSLPSWSTV*ATFSSVTFLAYDTWYS 186
+ +++ + S+A + + + +W +V AT++ V+ Y+ W S
Sbjct: 175 SVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATY-NWVSV-ATYNWVSVATYN-WVS 231
Query: 185 L----WSLVTLFSW*SIAHWSLVTFVT 117
+ W V +SW S+A +SLV+ T
Sbjct: 232 VATYNWVSVATYSWVSVATYSLVSVAT 258
Score = 32.3 bits (70), Expect = 0.29
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 9/162 (5%)
Frame = -2
Query: 518 SWLSLRTRE-PSVSFHSWGTIQS--WSTRGTI*PWKTIYSRN----TAWSWFSFLTIN-- 366
+W+S+ T SV+ ++W ++ + W + T W ++ + N ++W S T N
Sbjct: 148 NWVSVATYNWVSVATYNWVSVATYNWVSVATY-NWVSVATYNWVSVATYNWVSVATYNWV 206
Query: 365 DCCRFTFITFVAWFXXXXXXXXXXSIAFFTTHTYCSLPSWSTV*ATFSSVTFLAYDTWYS 186
+ +++ + S+A + + + SW +V AT+S V+ Y+
Sbjct: 207 SVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATY-SWVSV-ATYSLVSVATYN---- 260
Query: 185 LWSLVTLFSW*SIAHWSLVTFVTLFASYTRKSCWSLSPIISW 60
W V +SW S+A ++ V+ T W SW
Sbjct: 261 -WVSVATYSWVSVATYNWVSVATYSWVSVATYSWVSVATYSW 301
Score = 31.9 bits (69), Expect = 0.38
Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Frame = -2
Query: 518 SWLSLRTRE-PSVSFHSWGTIQS--WSTRGTI*PWKTIYSRN----TAWSWFSFLTIN-- 366
+W+S+ T SV+ ++W ++ + W + T W ++ + N ++W S T N
Sbjct: 108 NWVSVATYNWVSVATYNWVSVATYNWVSVATY-NWVSVATYNWVSVATYNWVSVATYNWV 166
Query: 365 DCCRFTFITFVAWFXXXXXXXXXXSIAFFTTHTYCSLPSWSTV*ATFSSVTFLAYDTWYS 186
+ +++ + S+A + + + +W +V AT++ V+ Y+ W S
Sbjct: 167 SVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATY-NWVSV-ATYNWVSVATYN-WVS 223
Query: 185 L----WSLVTLFSW*SIAHWSLVTFVTLFASYTRKSCWSLSPIISW 60
+ W V ++W S+A +S V+ T W SW
Sbjct: 224 VATYNWVSVATYNWVSVATYSWVSVATYSLVSVATYNWVSVATYSW 269
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = -2
Query: 518 SWLSLRTRE-PSVSFHSWGTIQ--SWSTRGTI*PWKTIYSRN-TAWSWFSFLTINDCCRF 351
+W+S+ T SV+ +SW ++ SW + T W ++ + N + + +S +++ND CRF
Sbjct: 276 NWVSVATYSWVSVATYSWVSVATYSWVSVATY-NWVSVATDNWVSVATYSCISLNDTCRF 334
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 34.7 bits (76), Expect = 0.054
Identities = 31/112 (27%), Positives = 33/112 (29%)
Frame = +3
Query: 96 PGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMS 275
P G KG GP G L G RG DG GG G
Sbjct: 358 PSFNGPKGGASFDGPGG-SLRGPSFDGPKGGASFGGPDGSLRGP-SFDGPKGGVSFNGPD 415
Query: 276 GEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G F G G G KG P + G P+G DG GS
Sbjct: 416 GSLSGPSFDGPKGGASFGGPKGSVQGPDLNIGGGANTKAPKGGASFDGPGGS 467
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 34.3 bits (75), Expect = 0.072
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 253 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPG-NP*PTGPWSPLSP 116
PP LP P P P +P +P P P SPG +P T P P P
Sbjct: 456 PPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQPPLP 502
>SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035)
Length = 453
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPG 332
G G G QG +GM+G KG G G GL G PG
Sbjct: 223 GTRGPQGIQGPMGMNGSKGVPGPQGPQGLEGPPG 256
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 309 SGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
+G G G +G G + G KG PGP+G G++G PG+
Sbjct: 222 NGTRGPQGIQGPMG-----MNGSKGVPGPQGPQGLEGPPGA 257
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 69 DGAQGPTGFPGITGEKGDKGDQGPVG-YGLPG 161
+G +GP G G G G KG GP G GL G
Sbjct: 222 NGTRGPQGIQGPMGMNGSKGVPGPQGPQGLEG 253
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.3 bits (75), Expect = 0.072
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -3
Query: 277 PLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIP 98
P +P+AP PP P P+ P +P P S P P PT P P + V P
Sbjct: 910 PPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPP 969
>SB_11354| Best HMM Match : Collagen (HMM E-Value=0.09)
Length = 116
Score = 33.9 bits (74), Expect = 0.095
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G+ G KG+RG PG S G PG +GD+G+
Sbjct: 41 GLQGPKGERGPPGAS---GAPGARGDRGD 66
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 39 REGIAGQPGNDGAQGPTGFPGITGEKGD 122
++G+ G G G G +G PG G++GD
Sbjct: 39 KQGLQGPKGERGPPGASGAPGARGDRGD 66
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGD 131
G G G +GP G G G +GD+GD
Sbjct: 41 GLQGPKGERGPPGASGAPGARGDRGD 66
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGD 290
+G +G G PG GA G G++GD
Sbjct: 43 QGPKGERGPPGASGAPGARGDRGD 66
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQG 83
G +G KGE G G +G PG G +G
Sbjct: 41 GLQGPKGERGPPGASGAPGARGDRG 65
>SB_10146| Best HMM Match : Collagen (HMM E-Value=0.09)
Length = 536
Score = 33.9 bits (74), Expect = 0.095
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G+ G KG+RG PG S G PG +GD+G+
Sbjct: 189 GLQGPKGERGPPGAS---GAPGARGDRGD 214
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 39 REGIAGQPGNDGAQGPTGFPGITGEKGD 122
++G+ G G G G +G PG G++GD
Sbjct: 187 KQGLQGPKGERGPPGASGAPGARGDRGD 214
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGD 131
G G G +GP G G G +GD+GD
Sbjct: 189 GLQGPKGERGPPGASGAPGARGDRGD 214
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGEKGD 290
+G +G G PG GA G G++GD
Sbjct: 191 QGPKGERGPPGASGAPGARGDRGD 214
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQG 83
G +G KGE G G +G PG G +G
Sbjct: 189 GLQGPKGERGPPGASGAPGARGDRG 213
>SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 33.9 bits (74), Expect = 0.095
Identities = 38/140 (27%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGI---TGEKGDKGDQGPVGYGLPGEXXXXX 179
GQ+G G++G PG G P G G G++G G GYG P
Sbjct: 246 GQQGYGPPPGQQGYGAPPGQQGYGPPLGQQGYGPPPGQQGYGPPPGQQGYGPP--PGQQG 303
Query: 180 XXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRS----GLTGEPGYKGDK 347
G++G G P GQ G + +GF G S G T P Y+G
Sbjct: 304 YGSPPGQQGYGPPPGQQGY-GPPAGQQGYG-PPQGQQQGFSGPSLAVGGDTDTPSYQGAD 361
Query: 348 GEPAAVVYGQKGEPGPRGVP 407
V + P P P
Sbjct: 362 VPDQDVEGNENAAPPPPSAP 381
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = +3
Query: 222 GERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G++G PG QG G++G PG+ G PG +G G P GQ+G P G
Sbjct: 255 GQQGYGAPPGQQGYGPPLGQQGYGPPPGQQGYGPPPGQQG-YGPPP----GQQGYGSPPG 309
Query: 402 VPGIDGLPG 428
G PG
Sbjct: 310 QQGYGPPPG 318
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKG---DQGPVGYGLP 158
LGQ+G G++G PG G P G G G +G G GYG P
Sbjct: 272 LGQQGYGPPPGQQGYGPPPGQQGYGPPPGQQGYGSPPGQQGYGPPPGQQGYGPP 325
Score = 29.9 bits (64), Expect = 1.5
Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 3/117 (2%)
Frame = +3
Query: 60 PGNDGAQGPTGFPGITGEKGDKGDQGPV---GYGLPGEXXXXXXXXXXXXXXXXXXRGER 230
PG G P G G G +G P+ GYG P G++
Sbjct: 245 PGQQGYGPPPGQQGYGAPPGQQGYGPPLGQQGYGPP--------------------PGQQ 284
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
G PG QG G++G PG+ G PG +G G PA GQ+G P+G
Sbjct: 285 GYGPPPGQQGYGPPPGQQGYGSPPGQQGYGPPPGQQG-YGPPA----GQQGYGPPQG 336
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMS-GEKGDRGFPGRSGL---TGEPGYKGDKGEPA-AVVYGQKG 383
+G L G P GQ G G++G PG+ G G+ GY G+ GQ+G
Sbjct: 235 QGYGTLPGPPPGQQGYGPPPGQQGYGAPPGQQGYGPPLGQQGYGPPPGQQGYGPPPGQQG 294
Query: 384 EPGPRGVPGIDGLPG 428
P G G PG
Sbjct: 295 YGPPPGQQGYGSPPG 309
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 33.9 bits (74), Expect = 0.095
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGL 155
A+ + + G G G G G GP G PG G +G +G G V + L
Sbjct: 474 AVADRQENKSHGAAGPKGDRGPAGPPGPRGLPGAQGPQGIQGTPGVVNFTL 524
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +3
Query: 321 GEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
G G KGD+G PA G +G PG +G GI G PG
Sbjct: 485 GAAGPKGDRG-PAGPP-GPRGLPGAQGPQGIQGTPG 518
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 372 GQKGEPGPRGVPGIDGLPGS 431
G KG+ GP G PG GLPG+
Sbjct: 488 GPKGDRGPAGPPGPRGLPGA 507
>SB_25787| Best HMM Match : Asparaginase_2 (HMM E-Value=0.097)
Length = 1623
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 389 RTTRCSWNRWSSRVRWCPWCSRIEWCPRNERRPRVPWXXXXXXXXXXXXLPRNT 550
R RC+ RW V+ W + WCP + RR PW +P +T
Sbjct: 1059 RNRRCASQRWKDSVK--AW---LLWCPGSARRTSTPWSVRSFVVAPLNSVPSST 1107
>SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01)
Length = 738
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G PG +G GP G PG G G G +GP G
Sbjct: 603 GLPGVNGTSGPPGPPGDMGPPGLNGTRGPPG 633
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 39 REGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGY 149
+EG+ G G G GP G G G G +G GP +
Sbjct: 601 KEGLPGVNGTSGPPGPPGDMGPPGLNGTRGPPGPANF 637
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKGEP 356
G+ G G G PG G G PG G +G P
Sbjct: 603 GLPGVNGTSGPPGPPGDMGPPGLNGTRGPP 632
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 3 ALGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKG 119
AL +K +G G G +G PG G GP G G G G
Sbjct: 597 ALSEK--EGLPGVNGTSGPPGPPGDMGPPGLNGTRGPPG 633
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 33.5 bits (73), Expect = 0.13
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -3
Query: 283 FSPLIP-IAPCPPGL-PSKPR-SPLSPFWPMIPGIPCGPWSPFSPGNP*PTGP-WSPLSP 116
+SP P P P + P+ P SP SP + P P +SP SP PT P +SP SP
Sbjct: 412 YSPSSPAFMPSSPSMSPASPSYSPTSPGYS--PSSPSSGYSPASPSYS-PTSPSYSPTSP 468
Query: 115 -FSPVIP 98
+SP P
Sbjct: 469 SYSPTSP 475
Score = 32.7 bits (71), Expect = 0.22
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPG-IPCGP-WSPFSPGNP*PTGP-WSPLS 119
+P SP+ P P P +PS P + + P P +P P SP SP PT P +SP S
Sbjct: 388 TPGSPVSP-GPTSPYIPS-PAAASPGYSPSSPAFMPSSPSMSPASPSYS-PTSPGYSPSS 444
Query: 118 PFSPVIPGNXXXXXXXXXXXXXXXXSRPSSP 26
P S P + P+SP
Sbjct: 445 PSSGYSPASPSYSPTSPSYSPTSPSYSPTSP 475
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Frame = -3
Query: 217 SPFWPM-IPGIPC--GPWSPFSPGNP*PTGPWSPLSP-FSPVIPGNXXXXXXXXXXXXXX 50
SP W PG P GP SP+ P + +SP SP F P P
Sbjct: 381 SPSWMSPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGY 440
Query: 49 XXSRPSSPFCPFWP 8
S PSS + P P
Sbjct: 441 SPSSPSSGYSPASP 454
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -3
Query: 250 PGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSP 116
PG S S S M PG W +PG+P GP SP P
Sbjct: 359 PGAASFSPSAASDASGMSPGGFSPSWMSPTPGSPVSPGPTSPYIP 403
>SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G GAQGP G PG+ G G G + VG
Sbjct: 242 GAKGAQGAQGPKGNPGLRGRPGATGPRPTVG 272
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTG 323
PG +GA G G KG+ G GR G TG
Sbjct: 241 PGAKGAQGAQGPKGNPGLRGRPGATG 266
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYK 338
G G QGA G G G RG PG +G G K
Sbjct: 242 GAKGAQGAQGPKGNPGLRGRPGATGPRPTVGVK 274
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +3
Query: 303 GRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDG 419
G L PG KG +G G KG PG RG PG G
Sbjct: 233 GYGPLLCSPGAKGAQG-----AQGPKGNPGLRGRPGATG 266
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 372 GQKGEPGPRGVPGIDGLPGS 431
G +G GP+G PG+ G PG+
Sbjct: 245 GAQGAQGPKGNPGLRGRPGA 264
>SB_18205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 356 CSSRLWSKRRTRTTRCSWNRWSSRVRWCPWCSRIEWCPRNERRPRVPW 499
CS+ + RTTR ++R+ W PW SR+ + PR+ W
Sbjct: 34 CSTTTPTSNDPRTTRTPRMHGTTRISWMPWTSRMYGPYGPDGTPRISW 81
>SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1357
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQG 137
KG++ E + + G G++G G G G G+ GD+GD G
Sbjct: 805 KGREVEDEDDKVEGDDGDEGDDGDEGDNGDEGDDGDEGDDG 845
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 63 GNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G+DG +G G G G++GD GD+G G
Sbjct: 818 GDDGDEGDDGDEGDNGDEGDDGDEGDDG 845
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 66 NDGAQGPTGFPGITGEKGDKGDQGPVG 146
+D +G G G G++GD GD+G G
Sbjct: 813 DDKVEGDDGDEGDDGDEGDNGDEGDDG 839
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 270 MSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
+ G+ GD G G G G+ G GD+G+
Sbjct: 816 VEGDDGDEGDDGDEGDNGDEGDDGDEGD 843
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 267 GMSGEKGDRGFPGRSGLTGEPGYKGDKG 350
G G++GD G G +G G+ G +GD G
Sbjct: 818 GDDGDEGDDGDEGDNGDEGDDGDEGDDG 845
>SB_50127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 32.7 bits (71), Expect = 0.22
Identities = 37/122 (30%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Frame = +3
Query: 27 GELGREGIAGQPGNDG----------AQGPTGFPGITGEKGDKGDQGPVGYGLP-GEXXX 173
GE G GI GNDG G G GI +KG+ G+ G +G G+ G
Sbjct: 67 GEYGMMGIGKDKGNDGYGMIGIGIDKGNGAYGMIGIGIDKGN-GEYGMIGIGIDKGNSEY 125
Query: 174 XXXXXXXXXXXXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGL---TGEPGYKGD 344
G+D GG G IG+ +KG+ + G G+ G GY G
Sbjct: 126 GMIGIGIDKGNGEYGMIGIGIDKSNGGYGMIGICIDKGNSEY-GMIGIGIDKGNGGY-GM 183
Query: 345 KG 350
KG
Sbjct: 184 KG 185
Score = 29.1 bits (62), Expect = 2.7
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Frame = +3
Query: 63 GNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP-GEXXXXXXXXXXXXXXXXXXRGERGLD 239
G D G G GI +KG+ G G +G G+ G G+D
Sbjct: 5 GIDKGNGEYGMIGIGIDKGN-GGYGMIGIGIDKGNGGYGMIGIGIDKGNGAYGMIGIGID 63
Query: 240 GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGID 416
G G +G+ +KG+ G+ G G+ + G G G + GE G G+ GID
Sbjct: 64 KGNGEYGMMGIGKDKGNDGY-GMIGIGIDKG-NGAYGMIGIGIDKGNGEYGMIGI-GID 119
>SB_4883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/112 (25%), Positives = 38/112 (33%), Gaps = 3/112 (2%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXX 206
GE G+ G+ G G I GE G+ G G+ E
Sbjct: 93 GEAVVAGVTGKASVPGEAGVASEASIAGEARAAGEAR--GAGVADEAGGVGIAGEADEAS 150
Query: 207 XXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSG---LTGEPGYKGDKGE 353
G G G G G ++ E G+ G +G +TGE G G+ E
Sbjct: 151 VVGEAGGAGEAGGAGEAGEASVACEAGEASVAGEAGEASVTGEAGVAGEASE 202
>SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAV-VYGQKGEP 389
PG Q I + G KG G G G GEPG KG+ G + +Y ++ P
Sbjct: 464 PGPQPPI-IVGSKGPDGLRGYRGPKGEPGPKGEPGYKVCIGLYRERVNP 511
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 72 GAQGPTGFPGITGEKGDKGDQGPVGY 149
G++GP G G G KG+ G +G GY
Sbjct: 473 GSKGPDGLRGYRGPKGEPGPKGEPGY 498
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 339 GDKGEPAAVVY-GQKGEPGPRGVPG 410
G KG Y G KGEPGP+G PG
Sbjct: 473 GSKGPDGLRGYRGPKGEPGPKGEPG 497
>SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 32.3 bits (70), Expect = 0.29
Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 1/123 (0%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP-GEXXXXXXXXXXXXX 203
G+ G I G PG G G I G+ GD G G+ + G+
Sbjct: 46 GDPGHVMIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGYV 105
Query: 204 XXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKG 383
G + G PG IG G+ G PG + G+PG+ G+P V+ G
Sbjct: 106 MIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGYVMI--IG 163
Query: 384 EPG 392
+PG
Sbjct: 164 DPG 166
Score = 31.5 bits (68), Expect = 0.51
Identities = 39/138 (28%), Positives = 51/138 (36%), Gaps = 4/138 (2%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXX 206
G+ G I G PG+ G I G+ G G GYG+
Sbjct: 19 GDPGHMIIIGDPGHVMIIGDPDHLMIIGDPGHVMIIGDPGYGM--------IIGDPGHVI 70
Query: 207 XXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA-AVVYGQKG 383
G+ + G PG IG G G PG + G+PGY G+P ++ G G
Sbjct: 71 IIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGYVMIIGDPGYGMIIGDPGHVIIIGDPG 130
Query: 384 EPGPRGVPG---IDGLPG 428
+ G PG I G PG
Sbjct: 131 DVMIIGDPGHVMIIGDPG 148
>SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 1311
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G G +G G+ G G G GP G G G G GPVG
Sbjct: 1104 GPLGPVGPVGPVGLVGPVGPVGPVGPVGPVGPVGPVGPVDPVGPVG 1149
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
LG G G +G G G G G GP G G G G GPVG
Sbjct: 1106 LGPVGPVGPVGLVGPVGPVGPVGPVGPVGPVGPVGPVDPVGPVGPVG 1152
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G +G G G G G P G G G G G GPVG
Sbjct: 1118 VGPVGPVGPVGPVGPVGPVGPVGPVDPVGPVGPVGPVGPVGPVGPVG 1164
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G +G G G G GP G G G G G GPVG
Sbjct: 1121 VGPVGPVGPVGPVGPVGPVGPVDPVGPVGPVGPVGPVGPVGPVGPVG 1167
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G +G G G G GP G G G G G GPVG
Sbjct: 1124 VGPVGPVGPVGPVGPVGPVDPVGPVGPVGPVGPVGPVGPVGPVGPVG 1170
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G +G G G G G GP G G G G GPVG
Sbjct: 1112 VGPVGLVGPVGPVGPVGPVGPVGPVGPVGPVDPVGPVGPVGPVGPVG 1158
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G +G G G G G GP G G G G GPVG
Sbjct: 1115 VGLVGPVGPVGPVGPVGPVGPVGPVGPVDPVGPVGPVGPVGPVGPVG 1161
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
+G G G +G G G G G GP G G G G GPVG
Sbjct: 1109 VGPVGPVGLVGPVGPVGPVGPVGPVGPVGPVGPVDPVGPVGPVGPVG 1155
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 48 IAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
++G G G GP G G G G G GPVG
Sbjct: 1102 LSGPLGPVGPVGPVGLVGPVGPVGPVGPVGPVG 1134
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPV 143
+G G G +G G G G GP G G G G G GPV
Sbjct: 1127 VGPVGPVGPVGPVGPVDPVGPVGPVGPVGPVGPVGPVGPVGPVGPV 1172
>SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQG 137
G+PG G GP G PG G+ G +G +G
Sbjct: 351 GRPGPQGKMGPQGDPGPAGKDGLRGPKG 378
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTG 92
G+ G +G++G +G G G DG +GP G
Sbjct: 351 GRPGPQGKMGPQGDPGPAGKDGLRGPKG 378
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +2
Query: 389 RTTRCSWNRWSSRVRWCPWCSRIEWCPRNERRPRVPWXXXXXXXXXXXXLPRNT 550
R RC+ RW + W + WCP + RR PW +P +T
Sbjct: 968 RNRRCASQRWKDSAK--AW---LLWCPSSARRTSTPWSVRSFVVAPLNSVPSST 1016
>SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018)
Length = 188
Score = 32.3 bits (70), Expect = 0.29
Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 1/123 (0%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLP-GEXXXXXXXXXXXXX 203
G+ G I G PG G G I G+ GD G G+ + G+
Sbjct: 40 GDPGHVMIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGYV 99
Query: 204 XXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKG 383
G + G PG IG G+ G PG + G+PG+ G+P V+ G
Sbjct: 100 MIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGYVMI--IG 157
Query: 384 EPG 392
+PG
Sbjct: 158 DPG 160
Score = 31.5 bits (68), Expect = 0.51
Identities = 39/138 (28%), Positives = 51/138 (36%), Gaps = 4/138 (2%)
Frame = +3
Query: 27 GELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXX 206
G+ G I G PG+ G I G+ G G GYG+
Sbjct: 13 GDPGHMIIIGDPGHVMIIGDPDHLMIIGDPGHVMIIGDPGYGM--------IIGDPGHVI 64
Query: 207 XXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPA-AVVYGQKG 383
G+ + G PG IG G G PG + G+PGY G+P ++ G G
Sbjct: 65 IIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGYVMIIGDPGYGMIIGDPGHVIIIGDPG 124
Query: 384 EPGPRGVPG---IDGLPG 428
+ G PG I G PG
Sbjct: 125 DVMIIGDPGHVMIIGDPG 142
>SB_33143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 187 PCGPWSPFSPGNP*-PTGPWSPLSPFSP 107
P P SP +P +P PT P SP+SP SP
Sbjct: 128 PTSPTSPTTPTSPRTPTSPTSPISPTSP 155
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3
Query: 181 GPWSPFSPGNP*PTGPWSPLSPFSPVIP 98
GP SP SP P T P +P SP SP+ P
Sbjct: 127 GPTSPTSPTTP--TSPRTPTSPTSPISP 152
>SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042)
Length = 593
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/92 (25%), Positives = 29/92 (31%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXX 215
G +G G G+D G + GD G G G G G+
Sbjct: 35 GSDGSNGNGGDDDGDDGDGGNCDDDDSGDDGSDGNAGNGSDGDDDDSGDDGSDGNAGNGS 94
Query: 216 XRGERGLDGRPGGQGAIGMSGEKGDRGFPGRS 311
G DG G G+ G GD G G +
Sbjct: 95 DND--GSDGNGGEDGSDGAGDNDGDDGSDGEA 124
>SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 31.5 bits (68), Expect = 0.51
Identities = 31/100 (31%), Positives = 35/100 (35%), Gaps = 1/100 (1%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGEXXXXXXXXXXXXXXXXXXRGERG 233
G PG G+Q G G E+GD G G G GL GE G
Sbjct: 395 GNPGYGGSQFRGGSSGNGAEEGDNGYSGGGGAGLNSNGRNNKNFGGSRGTG-----GEGG 449
Query: 234 LDGRPGGQGAIGMSGEKG-DRGFPGRSGLTGEPGYKGDKG 350
GG G G S + + GF G G G G G G
Sbjct: 450 KSFLAGGAG--GRSNQNDVEGGFGGGGGPNGAGGGGGGGG 487
>SB_17162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -2
Query: 554 TLYSLEALWTRRSWLSLRTREPSVSFHSWGTIQSWSTRGTI*PWKTIYSRNTAW---SWF 384
TLY + + + W +L S + W T+ ++ + W T+Y +++ W
Sbjct: 42 TLYYMTSSYDVGGWSTLYYMTSSYNVSGWSTLYYMTSSYEVSGWSTLYYMTSSYGVSGWS 101
Query: 383 SFLTINDC 360
+F+ N C
Sbjct: 102 TFILSNSC 109
>SB_24333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 215 TFLAYDTWYSLWSLVTLFS-W*SIAHWSLVTFVTLFASYTRKSCWSL 78
+F T +SL+ TL+S + WSL TL++ Y R + WSL
Sbjct: 166 SFYDQTTLWSLYDRTTLWSLYDRTTLWSLYDRATLWSLYDRTTLWSL 212
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 197 TWYSLWSLVTLFS-W*SIAHWSLVTFVTLFASYTRKSCWSL 78
T +SL+ TL+S + WSL TL++ Y R + WSL
Sbjct: 154 TLWSLYDRTTLWSFYDQTTLWSLYDRTTLWSLYDRTTLWSL 194
Score = 27.9 bits (59), Expect(2) = 0.55
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = -2
Query: 269 TYCSLPSWSTV*ATFSSVTFLA-YD--TWYSLWSLVTLFSW*SIAH-WSLVTFVTLFASY 102
T SL +T+ + + T + YD T +SL+ TL+S A WSL TL++ Y
Sbjct: 154 TLWSLYDRTTLWSFYDQTTLWSLYDRTTLWSLYDRTTLWSLYDRATLWSLYDRTTLWSLY 213
Query: 101 TRKSCWS 81
R + WS
Sbjct: 214 DRTTLWS 220
Score = 22.2 bits (45), Expect(2) = 0.55
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = -2
Query: 542 LEALWTRRSWLSLRTREPSVSFHSWGTIQSWSTRGTI*PWKTIYSRNTAWSWFSFLTI 369
+E L+ R L R H I+ R T+ K++Y R T WS + T+
Sbjct: 101 IEPLYGRPMIEPLYGRSMFEPLHGRSMIKPLHDRTTL---KSLYDRTTPWSLYDRTTL 155
>SB_36926| Best HMM Match : Flocculin (HMM E-Value=0.93)
Length = 206
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 258 GAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 431
G G++ + G GF + +PG G +P V+G G+PG G + PGS
Sbjct: 50 GVFGLANQPGTAGFFSTTSQP-QPGVFGTTSQPQPGVFGSTGQPG--GSLFVASSPGS 104
>SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGD 131
G+ + GE+G G AG+ G G G GE + GD
Sbjct: 59 GEASEAGEVGEAGEAGEAGEAGEASGAGEASEAGEASEAGD 99
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 30.7 bits (66), Expect = 0.88
Identities = 29/134 (21%), Positives = 42/134 (31%), Gaps = 6/134 (4%)
Frame = +3
Query: 9 GQKGQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGD--QGPVGYGLPGEXXXXXX 182
G+ + GE AG+ G G TGE + G+ + G GE
Sbjct: 70 GEASETGEASEASEAGEASETGEAGKASEASETGEASEAGEAIEADEATGEAGEANEASK 129
Query: 183 XXXXXXXXXXXXRGERGLDGRPGGQGAIG----MSGEKGDRGFPGRSGLTGEPGYKGDKG 350
G G G G +GE + G + G+ G+ G
Sbjct: 130 AGKASEAGEASEVGGAGKASEAGEASETGEASEATGEASEAGEASEASKAGKASEAGEAG 189
Query: 351 EPAAVVYGQKGEPG 392
E AV G+ + G
Sbjct: 190 E--AVEAGEASKAG 201
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 12 QKGQKGELGREGIAGQPGNDG-AQGPTGFPGITGEKGD 122
+ G+ E G G AG+ DG A G G I GE G+
Sbjct: 272 EAGEASEAGEAGEAGEASEDGEATGEAGEASIAGEAGE 309
>SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 204
Score = 30.7 bits (66), Expect = 0.88
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 78 QGPTGFPGITGEKGDKGDQGPVG 146
QGP G PG+ G +G +G GP G
Sbjct: 171 QGPMGAPGVQGIQGMRGPPGPPG 193
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTG 92
+G G +G G G G PG G+ GP G
Sbjct: 174 MGAPGVQGIQGMRGPPGPPGPQGSLGPAG 202
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEK 116
+G G G +GI G G G GP G G G K
Sbjct: 171 QGPMGAPGVQGIQGMRGPPGPPGPQGSLGPAGAK 204
>SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 186
Score = 30.7 bits (66), Expect = 0.88
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 78 QGPTGFPGITGEKGDKGDQGPVG 146
QGP G PG+ G +G +G GP G
Sbjct: 153 QGPMGAPGVQGIQGMRGPPGPPG 175
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 6 LGQKGQKGELGREGIAGQPGNDGAQGPTG 92
+G G +G G G G PG G+ GP G
Sbjct: 156 MGAPGVQGIQGMRGPPGPPGPQGSLGPAG 184
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 15 KGQKGELGREGIAGQPGNDGAQGPTGFPGITGEK 116
+G G G +GI G G G GP G G G K
Sbjct: 153 QGPMGAPGVQGIQGMRGPPGPPGPQGSLGPAGAK 186
>SB_33012| Best HMM Match : DUF1388 (HMM E-Value=2.6e-18)
Length = 212
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG-DKGEPAAVVYGQKGEPGPRGVP 407
G D PG G G PGR G +G DK + G+ PG P
Sbjct: 108 GRDKTPGRDKTPGRDKTPGRDKTPGRDKTPGRDKTQGRDKTQGRDKTPGRDKTPGRDKTP 167
Query: 408 GIDGLPGSD 434
G D PG D
Sbjct: 168 GRDKTPGRD 176
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKG-DKGEPAAVVYGQKGEPGPRGVP 407
G D PG G G PGR G +G DK G+ PG P
Sbjct: 114 GRDKTPGRDKTPGRDKTPGRDKTPGRDKTQGRDKTQGRDKTPGRDKTPGRDKTPGRDKTP 173
Query: 408 GIDGLPGSD 434
G D PG D
Sbjct: 174 GRDKTPGRD 182
>SB_18132| Best HMM Match : Collagen (HMM E-Value=1.2)
Length = 199
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G+LG++ G+ +DG G G E D G G +G
Sbjct: 146 GGSGDLGKDDHVGELADDGGSGDLGKDDHVRELADDGGSGDLG 188
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G+LG++ A + +DG G G E D G G +G
Sbjct: 92 GGSGDLGKDDHARELADDGGSGDLGKDDHVRELADSGGSGDLG 134
>SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 348
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 42 EGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGP 140
E + G G +G++GP PGI G +G++G GP
Sbjct: 228 EILRGPHGFNGSRGP---PGIQGPQGERGPMGP 257
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -3
Query: 232 PRSPLSPFWPMIPGIPCGPWSP 167
PRSP+SP P PG P P SP
Sbjct: 141 PRSPVSPGIPRSPGFPKSPRSP 162
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 286 PFSPLIPIAPCPPGLPSKPRSP 221
P SP+ P P PG P PRSP
Sbjct: 141 PRSPVSPGIPRSPGFPKSPRSP 162
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = -3
Query: 277 PLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIP 98
P IPI PP P P P P IPG P P +P PGNP P P P + IP
Sbjct: 55 PNIPIPGNPPPNTPIPGDP-PPNTP-IPGDP-PPNTPI-PGNPPPNTPIPGDPPPNTPIP 110
Query: 97 GN 92
G+
Sbjct: 111 GD 112
Score = 27.9 bits (59), Expect = 6.2
Identities = 25/65 (38%), Positives = 29/65 (44%)
Frame = -3
Query: 286 PFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
P + IP AP P R P +P IPG P P P PGNP P P P +
Sbjct: 24 PPNTTIPRAPPPNTAIPGDRPPNTP----IPGDP-PPNIPI-PGNPPPNTPIPGDPPPNT 77
Query: 106 VIPGN 92
IPG+
Sbjct: 78 PIPGD 82
>SB_46511| Best HMM Match : DUF776 (HMM E-Value=3.7)
Length = 390
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 325 NQATKVIKVNLQQSFMVKKENQDHAVFLE*MVFQGQMVPLVLQD*MVPQE*KETEGSLVR 504
N A V K + M K N A+F+E + G++VP QD + Q +E G L +
Sbjct: 45 NSARHVFKAKGNEDSMAIKRNWPDAIFVENRIISGEIVP-DQQDSRMHQITEEISGRLAK 103
Query: 505 KDNQDL 522
+ L
Sbjct: 104 LHSSQL 109
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +3
Query: 219 RGERGLDGRPGGQGAIGMSGE-KGDRGFPG-RSGLTGEPGYKGDKGEPAAVVYGQKGEPG 392
+G G DG G G+ G SG G RG G + +TG P GD P G G G
Sbjct: 950 KGWLGGDGEGAGSGSAGASGAGYGGRGGQGAATPITGSP--YGDYRSPQVFGSGGGGTGG 1007
Query: 393 PRGVPG 410
G G
Sbjct: 1008 KGGAGG 1013
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 277 PLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGP 176
P +P+ P PG+P+ P P+ +PG+P P
Sbjct: 57 PGMPMPPAYPGMPTYPPQPMQFLPGTLPGMPPPP 90
>SB_29605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 365 RLWSKR-RTRTTRCSWNRWSSRVRW 436
R W++R R R TR W +W+SR RW
Sbjct: 4 RRWTRRTRRRWTRRKWRKWTSR-RW 27
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 259 PCPPGLPSKPRSPLSPFWPMIPGIPC-GPWSPFSPGNP*PTGPWSPLSPFSP 107
PC PG + P LS WP + G C G S +S P P+G + P +P
Sbjct: 1024 PCTPGTYA-PVKKLSQCWPCMEGYYCPGANSEYS-SRPCPSGYYCPNGTATP 1073
>SB_56589| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.1)
Length = 743
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = +2
Query: 362 SRLWSKRRTRTTRCSWNRWSSRVRWCPWCSR-IEWCPRNERRPRVPWXXXXXXXXXXXXL 538
SR S + C+ NR + RW + WCP + RR PW +
Sbjct: 543 SRFVSPDASSFEYCARNRRYASQRWKDSAKAWLLWCPGSARRTSTPWSVRSFVVAPLNSV 602
Query: 539 PRNT 550
P +T
Sbjct: 603 PSST 606
>SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22)
Length = 767
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 315 LTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 434
+ G PG +G +G G +G GPRG+PG + D
Sbjct: 228 IVGSPGPRGPRGLRG--YRGARGHTGPRGLPGTSAVMMKD 265
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYG 152
G G G G+ G G G GP G PG + G PV G
Sbjct: 230 GSPGPRGPRGLRGYRGARGHTGPRGLPGTSAVMMKDGRWVPVTGG 274
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -3
Query: 286 PFSPLIPIAPCPPGLPSKPRSPLSPFWPMI-----PGIPCGPWSPFSPGNP 149
P P P P PP PS P P P P + PG P G S S GNP
Sbjct: 688 PPPPPPPPPPPPPPQPSTPPPP-PPSTPPVQQSGAPGSPAGSPSGTSAGNP 737
>SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56)
Length = 697
Score = 29.1 bits (62), Expect = 2.7
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Frame = +3
Query: 30 ELGREGIAGQPG-NDGAQGPTGFPGITGEKGDKGDQ-GPVGYGLPGEXXXXXXXXXXXXX 203
E G GI G G GA G G G+ G G D G +G G+ G
Sbjct: 462 EGGMNGIVGMNGMGGGANGMAG--GMNGMGGGMDDMAGGMGGGMNGMGAGMNAMGG---- 515
Query: 204 XXXXXRGERGLDGRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGE 353
G G+ G G +G GM+G G RG+ R G + D+ E
Sbjct: 516 ------GLNGIGGMNGMRGIGGMNGMDGMRGYE-RGPYGGSESFGLDRDE 558
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 262 APCPPG-LPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSP 107
+P PP +P +P + PF P I P PG P T PL+P+ P
Sbjct: 612 SPSPPSRVPPQPETAPKPF----PNITPPEVRPSLPGTPPETKTKPPLAPYPP 660
>SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 372 GQKGEPGPRGVPGIDGLPG 428
G KGEPGP G+PG G G
Sbjct: 1 GFKGEPGPPGLPGEQGPQG 19
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTG-FPGITGEKGDKG 128
G +G G PG G QGP G F G+ G+ G G
Sbjct: 1 GFKGEPGPPGLPGEQGPQGKFGGLLGDGGFGG 32
>SB_53555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G+LG++ A + +DG G G E D G G +G
Sbjct: 119 GGSGDLGKDDHARELADDGGSGDLGKDDHARELADSGGSGDLG 161
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 18 GQKGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVG 146
G G+LG++ + +DG G G E D G G +G
Sbjct: 173 GGSGDLGKDDHVRELADDGGSGDLGKDDHVRELADSGGSGDLG 215
>SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18)
Length = 283
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 222 GERGLDGRPGG--QGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP 395
G+ G+ GG ++ G GD G G+ G+ G GD G V G G
Sbjct: 18 GDDGVVNDDGGVNDDSVVNDGVFGDDGVVNY-GVVGDDGVFGDNGVVNDGVVGDDGVVND 76
Query: 396 RGVPGIDGLPGSD 434
GV DG+ G+D
Sbjct: 77 DGVIDDDGVVGND 89
>SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 277 PLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP 149
P+ IAPCPP P+K + +P I C W PF G+P
Sbjct: 93 PIADIAPCPP--PTKHK---------VPDIRC-RWKPFGSGDP 123
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Frame = -3
Query: 259 PCPPGLPSKPRSPLSPFWPMIPG-IPCGP--WSPFSPGNP*P--TGPW 131
P PPG P +P P W PG IP P + F P P P PW
Sbjct: 400 PPPPGPPMLNMAPSIPPWQTTPGYIPPPPPGFPQFQPPPPPPPSDAPW 447
>SB_53235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 20
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 372 GQKGEPGPRGVPGIDGLPGS 431
G +G+PGP G PG+ G G+
Sbjct: 1 GPRGQPGPEGSPGLPGERGT 20
>SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35)
Length = 374
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 33 LGREGIAGQPGNDGAQGPTGFPGITG 110
+GR+G G+PG +G G G PG G
Sbjct: 13 IGRDGKDGKPGLNGRDGRDGNPGRVG 38
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -3
Query: 274 LIPIAPCPPG-LPSKPRSPLSPFWPM--IPGIPCGPWSPFSPGNP*PTG 137
L P P PPG + P P+ + P P P GP PF G P P G
Sbjct: 454 LPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPPPFYRGPPPPRG 502
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKG---EPAAVVYGQKGEPGPRGVPG 410
PG QGA G + G PG G G P + + A YGQ G P +PG
Sbjct: 294 PGYQGAGGYGTQPG----PGAMGAYGAPPREAPGAYAPQSGAADYGQAGVPPTSAIPG 347
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -3
Query: 292 RSPFSPLIP--IAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLS 119
+SP +P +P + P PP P +P+ P IP +PC P +P P P P +
Sbjct: 746 KSPPAPPLPPKVTPKPPAPPQF--APVPPPCAPIPPMPCSAPLPPAPA-PFSAAPHLPPA 802
Query: 118 P 116
P
Sbjct: 803 P 803
>SB_56576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 90 GFPGITGEKGDKGDQGPVG 146
G G G+KGDKGDQG G
Sbjct: 105 GQKGDKGDKGDKGDQGAQG 123
>SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 246 PGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGPRG 401
PG Q + KGD GR G G PG G G A+ G +G G RG
Sbjct: 321 PGIQFDFVNTEPKGDSRGGGRGGRGGRPGRGGRGGRGAS---GGRGRGGGRG 369
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Frame = +3
Query: 231 GLDGRPGGQGAIGMSGEKGDRGFP----GRSGLTGEPGYK-GDKGEPAAVVYGQKGEPGP 395
G PGG G G G+P G +G PG G G P + YG P
Sbjct: 36 GYPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPPPPGIAPGIGGPPPSGQYGAPPTSQP 95
Query: 396 RGVPGIDGLPG 428
G P G PG
Sbjct: 96 YGAPPTSGYPG 106
>SB_31470| Best HMM Match : SAND (HMM E-Value=5e-37)
Length = 912
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPL 218
+P +PL P+AP PGL S P +P+
Sbjct: 630 TPMTPLTPMAPMTPGL-STPGTPI 652
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 250 PGLPSKPRSPLSPFWPMIPGI 188
P P P +PL+P PM PG+
Sbjct: 625 PHTPMTPMTPLTPMAPMTPGL 645
>SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 546
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 9 GQKGQKGE-LGREGIAGQPGNDGAQGPTGFPGITGEKG 119
G GQ GE + R G G+ A+G GFP TGE G
Sbjct: 101 GTCGQYGECICRPGYTGRSCESCAKGFYGFPHCTGEYG 138
>SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2499
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -3
Query: 241 PSKPRSPLSPFWPMIPG---IPCGPWSP 167
PS P SPL+P P PG +P GP P
Sbjct: 982 PSSPLSPLTPGAPDAPGGHRLPLGPCKP 1009
>SB_51462| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-15)
Length = 930
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 570 RFLLVHPVFLGSLVDPEVLVVLADQGTLGLLSFLGHHSILEHQG 439
R LLVH LG++V V+L +G LG + +LEH+G
Sbjct: 213 RVLLVHRGGLGTVVRGNPRVLLEHRGGLGTVVTGNPRVLLEHRG 256
>SB_19556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = -3
Query: 262 APCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFS 110
AP P + P P +P P +P PC P N PT +P P S
Sbjct: 46 APAPFDTTTPPNEPHAPNTPSLPPDPCAP----PTLNTEPTRETTPTPPLS 92
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 219 RGERGLD-GRPGGQGAIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPGP 395
RGER + P GMS +G R P R TGE G + P Y ++ P P
Sbjct: 653 RGERDVRRDDPREDRRPGMSEGRG-RDRPERPDRTGERGREPRYSTPQGPDYHRRPSPSP 711
Query: 396 RGVP 407
G P
Sbjct: 712 PGPP 715
>SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = -2
Query: 530 WTRRSWLSLRTREPSVSFHSWGTIQSWSTRGTI*PWKTIYSRNTAWSWFSFLTINDCCRF 351
W+ S + PS W T ++T PW T NT WS S +T+ D C
Sbjct: 634 WSTPSRYNTPWSTPSRYNTPWSTPSRYNT-----PWPTPSRYNTPWSTPSRVTVLDVCAI 688
Query: 350 TFI 342
I
Sbjct: 689 HII 691
>SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2)
Length = 454
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -3
Query: 250 PGLPSKPRSPLSPF-WPMIPGI-PCG--PWSPFSPG-NP*PTGPWSPLSPFSPV 104
P +PS PL W PG P G PW P SPG P T PW P + P+
Sbjct: 149 PWVPSPWYRPLVTVPWVPSPGYRPLGTVPWVP-SPGYRPLGTVPWVPSPGYRPM 201
>SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 1640
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 268 PIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWS 170
P A P S+PRS L +PG+ C PWS
Sbjct: 1459 PPARPPLAADSRPRSALRRQRFALPGLGCYPWS 1491
>SB_30795| Best HMM Match : Epimerase (HMM E-Value=0)
Length = 869
Score = 27.9 bits (59), Expect = 6.2
Identities = 35/133 (26%), Positives = 45/133 (33%), Gaps = 17/133 (12%)
Frame = +3
Query: 54 GQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYGLPGE----XXXXXXXXXXXXXXXXXXR 221
G G GP G G +G + GP G G E R
Sbjct: 595 GPRGGRAVYGPRGGRSFDGSRGGRSYDGPRG-GRSMENGPRGGRATEFGPRGGRSYEGSR 653
Query: 222 GERGLDGRPGG-------QGAIGMSGEKGDRGFPGRSGLTGEPGY-KGDKGEPAAVVYGQ 377
G R +DG GG +G + G +G R G Y +G +G V+ G
Sbjct: 654 GGREIDGPRGGRSFKEGPRGGRAVEGPRGGRDLYEEGPRGGREVYLEGPRGGRDLVLEGP 713
Query: 378 KG-----EPGPRG 401
+G E GPRG
Sbjct: 714 RGGRDLYEEGPRG 726
>SB_19090| Best HMM Match : Collagen (HMM E-Value=0.1)
Length = 123
Score = 27.9 bits (59), Expect = 6.2
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Frame = +3
Query: 222 GERGLDGRPG---------GQGAI---GMSGEKGDRGF-PGRSGLTGEPGYKGD---KGE 353
G+RG +PG G GA G G G RG+ P GLT + Y GD +
Sbjct: 47 GQRGYTPQPGGLSPDDYYNGDGAADDDGSGGVNGQRGYTPQPGGLTPDDYYNGDGAADDD 106
Query: 354 PAAVVYGQKG-EPGPRG 401
+ V GQ+G P P G
Sbjct: 107 GSGGVNGQRGYTPQPGG 123
>SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31)
Length = 708
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 GRPGGQG-----AIGMSGEKGDRGFPGRSGLTGEPGYKGDKGEPAAVVYGQKGEPG 392
GR GG G A GM G G RG+PG +G G G+ G + + + G +G PG
Sbjct: 612 GRKGGHGGSQAEAGGMWG--GARGYPG-TGRKG--GHGGSQAKAGGMWGGARGYPG 662
>SB_165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 27.9 bits (59), Expect = 6.2
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Frame = -2
Query: 554 TLYSLEALWTRRSWLSLRTREPSVSFHSWGTIQSWSTRGTI*PWKTIYSRNTA-----WS 390
TLY + + + W +L S W T+ ++ + W T+Y ++ WS
Sbjct: 102 TLYYMTSSYDVGGWSTLYYMTSSYDVGGWSTLYYMTSSYDVGGWSTLYYMTSSYDVGGWS 161
Query: 389 WFSFLTIN-DCCRFTFITFVAWFXXXXXXXXXXSIAFFTTHTYCSLPSWSTV*ATFSSVT 213
++T + D ++ + ++ S ++ T +Y + WST+ SS
Sbjct: 162 ILYYMTSSYDVGGWSTL----YYMTSSYGVSGWSTLYYMTSSY-DVGGWSTLYYMTSSYE 216
Query: 212 FLAYDTWYSLWSLVTLFSW 156
+ T Y + S + W
Sbjct: 217 VSGWSTLYYMTSSYEVSGW 235
Score = 27.5 bits (58), Expect = 8.2
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Frame = -2
Query: 554 TLYSLEALWTRRSWLSLRTREPSVSFHSWGTIQSWSTRGTI*PWKTIYSRNTA-----WS 390
TLY + + + W +L S W T+ ++ + W T+Y ++ WS
Sbjct: 12 TLYYMTSSYDVGGWSTLYYMTSSYEVSGWSTLYYMTSSYDVGGWSTLYYMTSSYDVGGWS 71
Query: 389 WFSFLTIN-DCCRFTFITFVAWFXXXXXXXXXXSIAFFTTHTYCSLPSWSTV*ATFSSVT 213
++T + D ++ + ++ S ++ T +Y + WST+ SS
Sbjct: 72 TLYYMTSSYDVGGWSTL----YYMTSSYEVSGWSTLYYMTSSY-DVGGWSTLYYMTSSYD 126
Query: 212 FLAYDTWYSLWSLVTLFSW 156
+ T Y + S + W
Sbjct: 127 VGGWSTLYYMTSSYDVGGW 145
>SB_36778| Best HMM Match : Collagen (HMM E-Value=0.96)
Length = 327
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 228 RGLDGRP-GGQGAIGMSG-EKGDRGFPGRSGLTGEPGYKGDKGEP 356
RG DG P +G + E+G G P G GEP +G GEP
Sbjct: 32 RGADGEPIENRGPNDVPDIERGADGEPIERGADGEPIERGADGEP 76
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPW 131
+P P +P P PP P P P +P P G P + G P G W
Sbjct: 100 TPPPPTMPPTPPPPQTP-APPGPDTPAPPAPGGCGAKPHTRIVGGTKAPPGAW 151
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -3
Query: 280 SPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPV 104
SPL +P P SPL+ P+ P SP + +P T P SPL+ SP+
Sbjct: 213 SPLTSSSPLTSSSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSP-LTSP-SPLTSPSPL 269
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 280 SPLIPIAPCPPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPV 104
SPL +P P SPL+ P+ P SP + +P P SPL+ SP+
Sbjct: 189 SPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLT--SPSPLTSSSPLTSSSPL 245
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 289 SPFSPLIPIAPCPPGLPSKPRSP 221
SP SP P +PC P LP + RSP
Sbjct: 1644 SPVSPRSP-SPCEPRLPLESRSP 1665
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 294 GFPGR--SGLTG--EPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPG 428
GFPG G+ G G+ G G P G G PG G PG G+PG
Sbjct: 177 GFPGGMPGGMPGGMPGGFPGAGGMPGGFP-GAGGMPG--GFPGAGGMPG 222
>SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59)
Length = 487
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 36 GREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGP 140
G +G G+ G DG GP G G+ E GD P
Sbjct: 89 GLKGDPGRDGKDGKVGPQGPQGLRDEPFAYGDFTP 123
>SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 366 VYGQKGEPGPRGVPGIDGLPGS 431
VY + +PGP +PG++ +P S
Sbjct: 94 VYRTRNDPGPETIPGLEMIPKS 115
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = -3
Query: 265 IAPCPPGLPSKPRSP-LSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPG 95
+AP PP P P +P +P P P P P P TG P P +P G
Sbjct: 106 VAPTPPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGG 163
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 23.4 bits (48), Expect(2) = 8.5
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 443 WCSRIEWCPRN 475
W ++WCPRN
Sbjct: 310 WSFDVKWCPRN 320
Score = 22.2 bits (45), Expect(2) = 8.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 413 RWSSRVRWCP 442
+WS V+WCP
Sbjct: 309 QWSFDVKWCP 318
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,806,939
Number of Sequences: 59808
Number of extensions: 412497
Number of successful extensions: 6295
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3356
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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