Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D16
         (532 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g15860.2 68418.m01856 expressed protein                             37   0.007
At5g15860.1 68418.m01855 expressed protein                             37   0.007
At3g02410.1 68416.m00228 hypothetical protein weak similarity to...    36   0.013
At1g26120.1 68414.m03188 esterase-related contains similaity to ...    36   0.013
At4g14570.1 68417.m02243 acylaminoacyl-peptidase-related similar...    34   0.052
At3g22870.1 68416.m02883 F-box family protein contains Pfam PF00...    28   3.4  
At1g51745.1 68414.m05831 expressed protein                             27   6.0  
At4g23060.1 68417.m03325 calmodulin-binding family protein conta...    27   7.9  
At3g27890.1 68416.m03479 NADPH-dependent FMN reductase family pr...    27   7.9  
At2g23100.1 68415.m02756 DC1 domain-containing protein contains ...    27   7.9  

>At5g15860.2 68418.m01856 expressed protein
          Length = 299

 Score = 37.1 bits (82), Expect = 0.007
 Identities = 24/66 (36%), Positives = 36/66 (54%)
 Frame = +1

Query: 28  LMDSNMVVVTLNYRLGPLGFLSTADEIIPGNNGLKDQSFALHWVKNNINMFGGNPDSITL 207
           L + +++V  L+YR  P G +S           + D S  + +V NNI+ FGG+P+ I L
Sbjct: 181 LAERDIIVACLDYRNFPQGTISDM---------VTDASQGISFVCNNISAFGGDPNRIYL 231

Query: 208 TGCSAG 225
            G SAG
Sbjct: 232 MGQSAG 237


>At5g15860.1 68418.m01855 expressed protein
          Length = 427

 Score = 37.1 bits (82), Expect = 0.007
 Identities = 24/66 (36%), Positives = 36/66 (54%)
 Frame = +1

Query: 28  LMDSNMVVVTLNYRLGPLGFLSTADEIIPGNNGLKDQSFALHWVKNNINMFGGNPDSITL 207
           L + +++V  L+YR  P G +S           + D S  + +V NNI+ FGG+P+ I L
Sbjct: 181 LAERDIIVACLDYRNFPQGTISDM---------VTDASQGISFVCNNISAFGGDPNRIYL 231

Query: 208 TGCSAG 225
            G SAG
Sbjct: 232 MGQSAG 237


>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
           kynurenine formamidase [Mus musculus] GI:21552719
          Length = 422

 Score = 36.3 bits (80), Expect = 0.013
 Identities = 23/66 (34%), Positives = 36/66 (54%)
 Frame = +1

Query: 28  LMDSNMVVVTLNYRLGPLGFLSTADEIIPGNNGLKDQSFALHWVKNNINMFGGNPDSITL 207
           L + +++V  L+YR  P G +S           + D +  + +V NNI+ FGG+P+ I L
Sbjct: 176 LAERDIIVACLDYRNFPQGTISDM---------VSDAAQGISFVCNNISAFGGDPNRIYL 226

Query: 208 TGCSAG 225
            G SAG
Sbjct: 227 MGQSAG 232


>At1g26120.1 68414.m03188 esterase-related contains similaity to
           esterase 6 GI:606998 from [Drosophila simulans] and
           esterase GI:12584120 from [Sphingomonas elodea]
          Length = 476

 Score = 36.3 bits (80), Expect = 0.013
 Identities = 23/66 (34%), Positives = 36/66 (54%)
 Frame = +1

Query: 28  LMDSNMVVVTLNYRLGPLGFLSTADEIIPGNNGLKDQSFALHWVKNNINMFGGNPDSITL 207
           L + +++V  ++YR  P G +S           +KD S  + +V N+I  +GG+PD I L
Sbjct: 232 LSERDIIVACIDYRNFPQGSISDM---------VKDASSGISFVCNHIAEYGGDPDRIYL 282

Query: 208 TGCSAG 225
            G SAG
Sbjct: 283 MGQSAG 288


>At4g14570.1 68417.m02243 acylaminoacyl-peptidase-related similar to
           Acylamino-acid-releasing enzyme (EC 3.4.19.1)
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
           (Swiss-Prot:P13676) [Rattus norvegicus]; annotated with
           nonconsensus TT and CT acceptor splice sites.
          Length = 764

 Score = 34.3 bits (75), Expect = 0.052
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +1

Query: 58  LNYRLGPLGFLSTADEIIPGNNGLKDQSFALHWVKNNINMFGGNPDSITLTGCSAGG 228
           +NYR G LG+   A + +PG  G +D    L  V + I M   +P  IT+ G S GG
Sbjct: 566 INYR-GSLGYGEDALQSLPGKVGSQDVKDCLLAVDHAIEMGIADPSRITVLGGSHGG 621


>At3g22870.1 68416.m02883 F-box family protein contains Pfam
           PF00646: F-box domain; contains TIGRFAM TIGR01640 :
           F-box protein interaction domain
          Length = 413

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = +1

Query: 28  LMDSNMVVVTLNYRLGPLGFLSTADEIIPGNNGLKDQSFALHWVKNN 168
           L D N  VV  N  LG   F+      IPG  G    S+AL + KNN
Sbjct: 104 LKDDNTKVVVWNPYLGQRRFIQVRFSHIPG--GWDQFSYALGYYKNN 148


>At1g51745.1 68414.m05831 expressed protein
          Length = 635

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 239 CTLAPPAEQPVRVILSGLPPN 177
           CT +PPA +PV  ILSG+  N
Sbjct: 425 CT-SPPASEPVNCILSGIEKN 444


>At4g23060.1 68417.m03325 calmodulin-binding family protein contains
           Pfam profile PF00612: IQ calmodulin-binding motif
          Length = 543

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 302 PPSHHGVTPSNRRRRRKHSPL 364
           PPSHH  +P   RRRRK  P+
Sbjct: 71  PPSHHQSSP---RRRRKQKPM 88


>At3g27890.1 68416.m03479 NADPH-dependent FMN reductase family
           protein contains Pfam profile: PF03358 NADPH-dependent
           FMN reductase
          Length = 196

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 145 ALHWVKNNINMFGGNPDSITLTGCSAGGASVHYH 246
           AL W     N++   P +I  TG   GG    YH
Sbjct: 102 ALDWASRPPNVWADKPAAIISTGGGFGGGRSQYH 135


>At2g23100.1 68415.m02756 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 711

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 319 SHSVKPAQKAKTLASIVGCSNNNSKEILECL 411
           SH   P     T  + +GCSN  S++ LECL
Sbjct: 528 SHPNHPIYINLTKGACMGCSNACSRKYLECL 558


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.317    0.134    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,522,355
Number of Sequences: 28952
Number of extensions: 268158
Number of successful extensions: 697
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)