Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D15
         (457 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    35   4e-04
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   9.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   9.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   9.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   9.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   9.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   9.5  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 34.7 bits (76), Expect = 4e-04
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 3   FIGPKYDCMGRLMSINDKRLDMLEIDSFVYKLDTGKNNIVRSS 131
           F+ PK D  G      D+++  +E+D F   L  G+N I R+S
Sbjct: 503 FLAPKTDERGNPWLFRDQKIMFIELDKFTVNLKQGQNTITRAS 545


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 347 NHTGLDGSHDDEHLERQTAEGSER*QKPVRKAKATL 240
           NH  +  SH  EH+ R   E   R ++   K K +L
Sbjct: 565 NHM-VKNSHYKEHIMRSITESGGRRRQTREKRKKSL 599


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 398 PPTSVSRLHSRHIN*W*NHTGLDGSHDDEHLERQTAEG 285
           P TS +R H+ + N   NH   +  +D+ +     A+G
Sbjct: 369 PSTSNNRWHNNNGNNSNNHWRKNNPNDNRNNTSSRAQG 406


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 268 SLCGKPRRLLYHQLSMLLKPVPVVSKPFSNM 176
           SL GK      H L  +    P  S PF+ M
Sbjct: 140 SLLGKVEGAATHHLGSVYSRHPYESWPFNTM 170


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 259 GKPRRLLYHQLSMLLKPVPVV 197
           G+ R+ + H LS + +P PV+
Sbjct: 174 GRMRQHVMHNLSSVPQPQPVL 194


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 259 GKPRRLLYHQLSMLLKPVPVV 197
           G+ R+ + H LS + +P PV+
Sbjct: 174 GRMRQHVMHNLSSVPQPQPVL 194


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 259 GKPRRLLYHQLSMLLKPVPVV 197
           G+ R+ + H LS + +P PV+
Sbjct: 174 GRMRQHVMHNLSSVPQPQPVL 194


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +2

Query: 116 HRPQLARDARRYRTETVD*KHIGKRFRHNWNRFQ 217
           H PQ   D + YR ++    H+      N ++ Q
Sbjct: 99  HGPQQQMDGQEYRPDSPSSMHMANTAAPNGHQTQ 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,408
Number of Sequences: 336
Number of extensions: 2096
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)