Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D15
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 30 3.3
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 30 3.3
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 30 3.3
M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2 ... 30 4.3
BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear r... 30 4.3
AK223517-1|BAD97237.1| 256|Homo sapiens Heterogeneous nuclear r... 30 4.3
AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear r... 30 4.3
BC151246-1|AAI51247.1| 2243|Homo sapiens DnaJ (Hsp40) homolog, s... 29 10.0
BC043583-1|AAH43583.1| 784|Homo sapiens DNAJC13 protein protein. 29 10.0
AY779857-1|AAV41096.1| 2243|Homo sapiens DnaJ domain-containing ... 29 10.0
AB014578-1|BAA31653.2| 2257|Homo sapiens KIAA0678 protein protein. 29 10.0
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 248 PWLSAQASVTSRNPRRFASPDVRHRD 325
PW A+ +V + P RF ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 248 PWLSAQASVTSRNPRRFASPDVRHRD 325
PW A+ +V + P RF ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 248 PWLSAQASVTSRNPRRFASPDVRHRD 325
PW A+ +V + P RF ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279
>M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2
protein mRNA. ).
Length = 303
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 93 KLDTGKNNIVRSSLEMHGVIEQRPWTKNILEKGFD 197
K++ GK + RS+ EM+G + + P +L FD
Sbjct: 89 KVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFD 123
>BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 93 KLDTGKNNIVRSSLEMHGVIEQRPWTKNILEKGFD 197
K++ GK + RS+ EM+G + + P +L FD
Sbjct: 89 KVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFD 123
>AK223517-1|BAD97237.1| 256|Homo sapiens Heterogeneous nuclear
ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) variant
protein.
Length = 256
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 93 KLDTGKNNIVRSSLEMHGVIEQRPWTKNILEKGFD 197
K++ GK + RS+ EM+G + + P +L FD
Sbjct: 39 KVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFD 73
>AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear
ribonucleoproteins C1/C2 variant protein.
Length = 313
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 93 KLDTGKNNIVRSSLEMHGVIEQRPWTKNILEKGFD 197
K++ GK + RS+ EM+G + + P +L FD
Sbjct: 96 KVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFD 130
>BC151246-1|AAI51247.1| 2243|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 13 protein.
Length = 2243
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +2
Query: 113 QHRPQLARDARRYRTETVD*KHIGKR---FRHNWN 208
+HR +L +A R+RT+ + K G+R ++H+W+
Sbjct: 88 EHRTELLTEALRFRTDFSEGKITGRRYNCYKHHWS 122
>BC043583-1|AAH43583.1| 784|Homo sapiens DNAJC13 protein protein.
Length = 784
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +2
Query: 113 QHRPQLARDARRYRTETVD*KHIGKR---FRHNWN 208
+HR +L +A R+RT+ + K G+R ++H+W+
Sbjct: 88 EHRTELLTEALRFRTDFSEGKITGRRYNCYKHHWS 122
>AY779857-1|AAV41096.1| 2243|Homo sapiens DnaJ domain-containing
protein RME-8 protein.
Length = 2243
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +2
Query: 113 QHRPQLARDARRYRTETVD*KHIGKR---FRHNWN 208
+HR +L +A R+RT+ + K G+R ++H+W+
Sbjct: 88 EHRTELLTEALRFRTDFSEGKITGRRYNCYKHHWS 122
>AB014578-1|BAA31653.2| 2257|Homo sapiens KIAA0678 protein protein.
Length = 2257
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +2
Query: 113 QHRPQLARDARRYRTETVD*KHIGKR---FRHNWN 208
+HR +L +A R+RT+ + K G+R ++H+W+
Sbjct: 102 EHRTELLTEALRFRTDFSEGKITGRRYNCYKHHWS 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,618,271
Number of Sequences: 237096
Number of extensions: 1314246
Number of successful extensions: 3282
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3281
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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