Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D14
         (599 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28536| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.8  

>SB_28536| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 467

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 448 KGLWLSRGLTNLEVVWVTSLNLIFGSRIHC 359
           KG +  +G+ N  ++ V S   I+G R+HC
Sbjct: 436 KGFFNKQGMFNFALLMVCSPGDIYGKRLHC 465


>SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 634

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 479 ISDLTFDGNTERLVVESWFDEP*SC 405
           I  +  DG   ++ V SWFD+P  C
Sbjct: 97  IVPVEIDGTVHQIPVTSWFDDPNDC 121


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,484,567
Number of Sequences: 59808
Number of extensions: 362715
Number of successful extensions: 844
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)