Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D14
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68300-2|CAA92616.2|  440|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AC084158-23|AAP31422.1|  187|Caenorhabditis elegans Hypothetical...    29   2.5  
AC084158-22|AAM15623.1|  214|Caenorhabditis elegans Hypothetical...    29   2.5  
AC084158-21|AAK68581.1|  271|Caenorhabditis elegans Hypothetical...    29   2.5  
AL032631-14|CAA21578.1|  243|Caenorhabditis elegans Hypothetical...    29   3.3  
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    28   4.4  
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    28   4.4  
Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p...    27   7.7  
U39648-3|AAM15603.1|  434|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AC087081-18|AAK66030.1|  124|Caenorhabditis elegans Hypothetical...    27   7.7  

>Z68300-2|CAA92616.2|  440|Caenorhabditis elegans Hypothetical
           protein T22B3.1 protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -2

Query: 220 PTILSYS**NAGSRSPVWSKFKRTGHEGVLVEWFRCCTEHMASDNFIRSLI 68
           PT   Y   N  +  PVW+ FKRTG         +   +   S NF+R L+
Sbjct: 339 PTTKPYQKRNRKTEHPVWAFFKRTGDGNAECIICQGVVKSPCSSNFMRHLM 389


>AC084158-23|AAP31422.1|  187|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.7c protein.
          Length = 187

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 45  MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVR 155
           ++K  QR+ +D+ +  L +C  +H+NH+  TP  P +
Sbjct: 104 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTK 138


>AC084158-22|AAM15623.1|  214|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.7b protein.
          Length = 214

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 45  MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVR 155
           ++K  QR+ +D+ +  L +C  +H+NH+  TP  P +
Sbjct: 131 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTK 165


>AC084158-21|AAK68581.1|  271|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.7a protein.
          Length = 271

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 45  MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVR 155
           ++K  QR+ +D+ +  L +C  +H+NH+  TP  P +
Sbjct: 177 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTK 211


>AL032631-14|CAA21578.1|  243|Caenorhabditis elegans Hypothetical
           protein Y106G6H.15 protein.
          Length = 243

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
 Frame = -1

Query: 344 CR*SKNVTNFSTTTSFDLNT-DEMKFLLEDNGF------R*C-LTCVNVTHNPVI*LIEC 189
           CR  +N+ NF TT S  LNT   +K LL+D  F        C  TC+N T + +   +  
Sbjct: 19  CR--ENIPNFETTISPLLNTMKNIKLLLDDAAFDQQKLENNCEETCMNCTKSQLNDFLGI 76

Query: 188 RVSKSGLVKVQA 153
           +V  S +V V++
Sbjct: 77  KVEASTIVDVKS 88


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/32 (37%), Positives = 23/32 (71%)
 Frame = +1

Query: 247 LKPLSSKRNFISSVFKSNDVVVEKLVTFFDYR 342
           LKP  + R++I S+F+++DV++  ++T   YR
Sbjct: 25  LKPRPT-RSYIHSLFENSDVIIAGVITGISYR 55


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/32 (37%), Positives = 23/32 (71%)
 Frame = +1

Query: 247 LKPLSSKRNFISSVFKSNDVVVEKLVTFFDYR 342
           LKP  + R++I S+F+++DV++  ++T   YR
Sbjct: 25  LKPRPT-RSYIHSLFENSDVIIAGVITGISYR 55


>Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical
           protein R06F6.8a protein.
          Length = 1468

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = +3

Query: 84  KLSLAMCSVQHLNHSTSTPSCPV-----RLNFDQTGLRDPAFYQLYDRIV 218
           K+S  + +V  +N     P+C V     +LN D  G   PAFY   D ++
Sbjct: 581 KVSTEIVTVIRINEIVPHPTCIVSLQMTQLNLDVRGKLSPAFYSSIDTVL 630


>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
           protein R06F6.8b protein.
          Length = 1470

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = +3

Query: 84  KLSLAMCSVQHLNHSTSTPSCPV-----RLNFDQTGLRDPAFYQLYDRIV 218
           K+S  + +V  +N     P+C V     +LN D  G   PAFY   D ++
Sbjct: 581 KVSTEIVTVIRINEIVPHPTCIVSLQMTQLNLDVRGKLSPAFYSSIDTVL 630


>U39648-3|AAM15603.1|  434|Caenorhabditis elegans Hypothetical
           protein T13C5.2 protein.
          Length = 434

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 386 SHFWIKNTLLVASNCR*SKNVTNFSTTTS 300
           +HF++K+ +L    CR + + T  +TTT+
Sbjct: 10  AHFYLKSQILATFQCRSTGSTTTTTTTTT 38


>AC087081-18|AAK66030.1|  124|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.1 protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 597 LVREPIQFVEFMPVFFQCDGESXIVV 520
           L+R+PIQ V+   V   CDGE+ + +
Sbjct: 96  LLRKPIQIVDDCSVKMYCDGEAKLFI 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,686,561
Number of Sequences: 27780
Number of extensions: 276552
Number of successful extensions: 692
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)